| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349010
Identifier: 29349010
GI number: 29349010
Start: 4665576
End: 4667435
Strand: Reverse
Name: 29349010
Synonym: BT_3602
Alternate gene names: NA
Gene position: 4667435-4665576 (Counterclockwise)
Preceding gene: 29349011
Following gene: 29349009
Centisome position: 74.56
GC content: 42.74
Gene sequence:
>1860_bases ATGAAAATAAAATATCTATTCACCGGGGTACTAATATCAATGCTAGCCTTCATGAGCTGCGAGGACCCGGACGATCTGGC AAGGACAGGCAGCGAAAATGTTACAGGACTAACCATAACCGGATGCTTAGCTTCTGATGAAAGTACCACATATAGTGCTA TCGTAGACGAGGCAAGTAATACAATTACCATACAAGTTCCTTATTATATTTCAGATACGGAAAAAATACAAGGTGACCTG ACACAAATGAAAGTTTCAGCCAGCCTGCCTGTAGGAGCAAAATTCTCCCCCAGCATTTCCGGCATTCGTGATCTGGTCAG TGGTTTCCAATCAACATTAGTCAAAGAAGATGGAAGCAAAATTACTTATACATTTAAGGCTGCTTATGTGAAATCAAAAT TAGCCAGTATTAGTAAAGTAGAACTGACAGACTATTCACGTGCAACAATACGTATCGTCGAACCTGAGAGTACGGGTGGT ACAGGAAAAATCATCATCTATAAAACCTCTTCAGCTATTGATGCAGCCTTGAAGTCTGCGGCATTAACAGTCTCTCCATG GGCTACTATCGAATCATCATCATTGGATCCGGCAACCGGCATTATAGATTTAAGTAACCAACCGACTATAACCGTTATTG CACAAAATGAAACAGACAAAACAGTCTATCAGACTAGTCTGGAACTCCCGGATCTATTACCTCAGGGAGTGGGCTATACA GCTTCATTATTTGGTTTCCAAATCTATACAGATGACACACATGGATTTGAGGTTGGAGCGAACCGTACAATGGCTGTTAT TGACGACTATCTAATTATCAGTAATAGCACTGATTACAATAAAATGATTGTAATGGATCGTTATAACGGCAAAGTACTTG ATGTAAAAGTCAACACTACAGGTATTGATGCAGGCCGCTCCATCCATGCTATTACCAGTGATGATGCTGGACATTTAGTA GCTATGGCATACACTAGTACTTTAGACGCCAATGTTACCGACCCAAACGTACGTGCCTGGGTTTGGCCTAACGGCATCGA GAATGCACCTAAGAGCATCGTTTATGCAAATATTAATGGGAGTACATTCGCCAATGCTCCTGTAGGCATTAATGGAGTCA AAAAACTAGAGCTTGGACGCACAATCTGCGTCAAAGGTGATCTGACTTCAGGGGATGCAATTATTGCCACATCAACCAAA AATGTACCACGTGCGGTTTTCCTTATGTTCAAAGATGGTGCAATGCAAGGCAACGCTTATGTAGAATGGGGCGGAGGAGC ATCAGTCTCCATGTGGAACGCAACTAAAGTCATTCCATTGACAAATACTTCTCCACTAGGATATATTTGGGCCAGTGCCA ACTTCCGGCAAGCAATTAATTACACTCCTATAGGCACAGGCGCACGCGCCATAGATTTCTCACTTCCAACATCACATTGG TGGTCCGGTAGCGCTACATATGATAAGAATGTCCGGGGAATAGGATATGTTGAATTTAACGGTACATGTTTGTTAGGCGT TCAAAATGGTCTGTCAAGCAATGGGGTTTGGTCCCACCGCCTATATGTATCCAACATCACGAATAATCCCGGAACTTCAG CAATGGCTAATGGCTTTATCTTCGATTCACGTGAAGGAAGTACAACAGGAACAGGCAGTATCCCCGGAACGGGGTATGCG GTAACTGGTATGACATCTTCAGCCTCGTTCGTTTCTGGCAAACAGGTACTTGGTACCAACGTTGATGAAACAGGAGATGT TGTATTCGGTCGAAGTGCTGATGGCAATGCCGTTCAGGTCTATATGTTGACTACGGATCAGGGACTATTTGCTTATGAAA TTACCAGATTCAATTTATAA
Upstream 100 bases:
>100_bases ATATACAATTTTCCCTATTCCATACACAGAACTTCAAGACAACACACTCTGTGAACAAAATGAACTGTGGAAATAATAAT TATTTAATAAGAGAAAAATT
Downstream 100 bases:
>100_bases ATGAAAATTTAAATATCATTTAAGATCATCTATAAACTACTCAGTAACAGTTGGCAATTACATATGAATAATTGCACAAC TGTTGCTAAGTAGTTATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MKIKYLFTGVLISMLAFMSCEDPDDLARTGSENVTGLTITGCLASDESTTYSAIVDEASNTITIQVPYYISDTEKIQGDL TQMKVSASLPVGAKFSPSISGIRDLVSGFQSTLVKEDGSKITYTFKAAYVKSKLASISKVELTDYSRATIRIVEPESTGG TGKIIIYKTSSAIDAALKSAALTVSPWATIESSSLDPATGIIDLSNQPTITVIAQNETDKTVYQTSLELPDLLPQGVGYT ASLFGFQIYTDDTHGFEVGANRTMAVIDDYLIISNSTDYNKMIVMDRYNGKVLDVKVNTTGIDAGRSIHAITSDDAGHLV AMAYTSTLDANVTDPNVRAWVWPNGIENAPKSIVYANINGSTFANAPVGINGVKKLELGRTICVKGDLTSGDAIIATSTK NVPRAVFLMFKDGAMQGNAYVEWGGGASVSMWNATKVIPLTNTSPLGYIWASANFRQAINYTPIGTGARAIDFSLPTSHW WSGSATYDKNVRGIGYVEFNGTCLLGVQNGLSSNGVWSHRLYVSNITNNPGTSAMANGFIFDSREGSTTGTGSIPGTGYA VTGMTSSASFVSGKQVLGTNVDETGDVVFGRSADGNAVQVYMLTTDQGLFAYEITRFNL
Sequences:
>Translated_619_residues MKIKYLFTGVLISMLAFMSCEDPDDLARTGSENVTGLTITGCLASDESTTYSAIVDEASNTITIQVPYYISDTEKIQGDL TQMKVSASLPVGAKFSPSISGIRDLVSGFQSTLVKEDGSKITYTFKAAYVKSKLASISKVELTDYSRATIRIVEPESTGG TGKIIIYKTSSAIDAALKSAALTVSPWATIESSSLDPATGIIDLSNQPTITVIAQNETDKTVYQTSLELPDLLPQGVGYT ASLFGFQIYTDDTHGFEVGANRTMAVIDDYLIISNSTDYNKMIVMDRYNGKVLDVKVNTTGIDAGRSIHAITSDDAGHLV AMAYTSTLDANVTDPNVRAWVWPNGIENAPKSIVYANINGSTFANAPVGINGVKKLELGRTICVKGDLTSGDAIIATSTK NVPRAVFLMFKDGAMQGNAYVEWGGGASVSMWNATKVIPLTNTSPLGYIWASANFRQAINYTPIGTGARAIDFSLPTSHW WSGSATYDKNVRGIGYVEFNGTCLLGVQNGLSSNGVWSHRLYVSNITNNPGTSAMANGFIFDSREGSTTGTGSIPGTGYA VTGMTSSASFVSGKQVLGTNVDETGDVVFGRSADGNAVQVYMLTTDQGLFAYEITRFNL >Mature_619_residues MKIKYLFTGVLISMLAFMSCEDPDDLARTGSENVTGLTITGCLASDESTTYSAIVDEASNTITIQVPYYISDTEKIQGDL TQMKVSASLPVGAKFSPSISGIRDLVSGFQSTLVKEDGSKITYTFKAAYVKSKLASISKVELTDYSRATIRIVEPESTGG TGKIIIYKTSSAIDAALKSAALTVSPWATIESSSLDPATGIIDLSNQPTITVIAQNETDKTVYQTSLELPDLLPQGVGYT ASLFGFQIYTDDTHGFEVGANRTMAVIDDYLIISNSTDYNKMIVMDRYNGKVLDVKVNTTGIDAGRSIHAITSDDAGHLV AMAYTSTLDANVTDPNVRAWVWPNGIENAPKSIVYANINGSTFANAPVGINGVKKLELGRTICVKGDLTSGDAIIATSTK NVPRAVFLMFKDGAMQGNAYVEWGGGASVSMWNATKVIPLTNTSPLGYIWASANFRQAINYTPIGTGARAIDFSLPTSHW WSGSATYDKNVRGIGYVEFNGTCLLGVQNGLSSNGVWSHRLYVSNITNNPGTSAMANGFIFDSREGSTTGTGSIPGTGYA VTGMTSSASFVSGKQVLGTNVDETGDVVFGRSADGNAVQVYMLTTDQGLFAYEITRFNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65926; Mature: 65926
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKYLFTGVLISMLAFMSCEDPDDLARTGSENVTGLTITGCLASDESTTYSAIVDEASN CEEEEEHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEEECCCC TITIQVPYYISDTEKIQGDLTQMKVSASLPVGAKFSPSISGIRDLVSGFQSTLVKEDGSK EEEEEEEEEECCCHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE ITYTFKAAYVKSKLASISKVELTDYSRATIRIVEPESTGGTGKIIIYKTSSAIDAALKSA EEEEEEEHHHHHHHHCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHC ALTVSPWATIESSSLDPATGIIDLSNQPTITVIAQNETDKTVYQTSLELPDLLPQGVGYT EEEECCCCEEECCCCCCCCCEEECCCCCEEEEEECCCCCCEEEEECCCCHHHCCCCCCCE ASLFGFQIYTDDTHGFEVGANRTMAVIDDYLIISNSTDYNKMIVMDRYNGKVLDVKVNTT EEEEEEEEEECCCCCEEECCCCEEEEEEEEEEEECCCCCCEEEEEECCCCEEEEEEEECC GIDAGRSIHAITSDDAGHLVAMAYTSTLDANVTDPNVRAWVWPNGIENAPKSIVYANING CCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCC STFANAPVGINGVKKLELGRTICVKGDLTSGDAIIATSTKNVPRAVFLMFKDGAMQGNAY CEECCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCEE VEWGGGASVSMWNATKVIPLTNTSPLGYIWASANFRQAINYTPIGTGARAIDFSLPTSHW EEECCCCEEEEECCEEEEEECCCCCCEEEEECCCCHHHCCCCCCCCCCEEEEECCCCCCC WSGSATYDKNVRGIGYVEFNGTCLLGVQNGLSSNGVWSHRLYVSNITNNPGTSAMANGFI CCCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCHHCCCEE FDSREGSTTGTGSIPGTGYAVTGMTSSASFVSGKQVLGTNVDETGDVVFGRSADGNAVQV EECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCEEEE YMLTTDQGLFAYEITRFNL EEEEECCCEEEEEEEEECC >Mature Secondary Structure MKIKYLFTGVLISMLAFMSCEDPDDLARTGSENVTGLTITGCLASDESTTYSAIVDEASN CEEEEEHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEEECCCC TITIQVPYYISDTEKIQGDLTQMKVSASLPVGAKFSPSISGIRDLVSGFQSTLVKEDGSK EEEEEEEEEECCCHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE ITYTFKAAYVKSKLASISKVELTDYSRATIRIVEPESTGGTGKIIIYKTSSAIDAALKSA EEEEEEEHHHHHHHHCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHC ALTVSPWATIESSSLDPATGIIDLSNQPTITVIAQNETDKTVYQTSLELPDLLPQGVGYT EEEECCCCEEECCCCCCCCCEEECCCCCEEEEEECCCCCCEEEEECCCCHHHCCCCCCCE ASLFGFQIYTDDTHGFEVGANRTMAVIDDYLIISNSTDYNKMIVMDRYNGKVLDVKVNTT EEEEEEEEEECCCCCEEECCCCEEEEEEEEEEEECCCCCCEEEEEECCCCEEEEEEEECC GIDAGRSIHAITSDDAGHLVAMAYTSTLDANVTDPNVRAWVWPNGIENAPKSIVYANING CCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCC STFANAPVGINGVKKLELGRTICVKGDLTSGDAIIATSTKNVPRAVFLMFKDGAMQGNAY CEECCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCEE VEWGGGASVSMWNATKVIPLTNTSPLGYIWASANFRQAINYTPIGTGARAIDFSLPTSHW EEECCCCEEEEECCEEEEEECCCCCCEEEEECCCCHHHCCCCCCCCCCEEEEECCCCCCC WSGSATYDKNVRGIGYVEFNGTCLLGVQNGLSSNGVWSHRLYVSNITNNPGTSAMANGFI CCCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCHHCCCEE FDSREGSTTGTGSIPGTGYAVTGMTSSASFVSGKQVLGTNVDETGDVVFGRSADGNAVQV EECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCEEEE YMLTTDQGLFAYEITRFNL EEEEECCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA