Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349010

Identifier: 29349010

GI number: 29349010

Start: 4665576

End: 4667435

Strand: Reverse

Name: 29349010

Synonym: BT_3602

Alternate gene names: NA

Gene position: 4667435-4665576 (Counterclockwise)

Preceding gene: 29349011

Following gene: 29349009

Centisome position: 74.56

GC content: 42.74

Gene sequence:

>1860_bases
ATGAAAATAAAATATCTATTCACCGGGGTACTAATATCAATGCTAGCCTTCATGAGCTGCGAGGACCCGGACGATCTGGC
AAGGACAGGCAGCGAAAATGTTACAGGACTAACCATAACCGGATGCTTAGCTTCTGATGAAAGTACCACATATAGTGCTA
TCGTAGACGAGGCAAGTAATACAATTACCATACAAGTTCCTTATTATATTTCAGATACGGAAAAAATACAAGGTGACCTG
ACACAAATGAAAGTTTCAGCCAGCCTGCCTGTAGGAGCAAAATTCTCCCCCAGCATTTCCGGCATTCGTGATCTGGTCAG
TGGTTTCCAATCAACATTAGTCAAAGAAGATGGAAGCAAAATTACTTATACATTTAAGGCTGCTTATGTGAAATCAAAAT
TAGCCAGTATTAGTAAAGTAGAACTGACAGACTATTCACGTGCAACAATACGTATCGTCGAACCTGAGAGTACGGGTGGT
ACAGGAAAAATCATCATCTATAAAACCTCTTCAGCTATTGATGCAGCCTTGAAGTCTGCGGCATTAACAGTCTCTCCATG
GGCTACTATCGAATCATCATCATTGGATCCGGCAACCGGCATTATAGATTTAAGTAACCAACCGACTATAACCGTTATTG
CACAAAATGAAACAGACAAAACAGTCTATCAGACTAGTCTGGAACTCCCGGATCTATTACCTCAGGGAGTGGGCTATACA
GCTTCATTATTTGGTTTCCAAATCTATACAGATGACACACATGGATTTGAGGTTGGAGCGAACCGTACAATGGCTGTTAT
TGACGACTATCTAATTATCAGTAATAGCACTGATTACAATAAAATGATTGTAATGGATCGTTATAACGGCAAAGTACTTG
ATGTAAAAGTCAACACTACAGGTATTGATGCAGGCCGCTCCATCCATGCTATTACCAGTGATGATGCTGGACATTTAGTA
GCTATGGCATACACTAGTACTTTAGACGCCAATGTTACCGACCCAAACGTACGTGCCTGGGTTTGGCCTAACGGCATCGA
GAATGCACCTAAGAGCATCGTTTATGCAAATATTAATGGGAGTACATTCGCCAATGCTCCTGTAGGCATTAATGGAGTCA
AAAAACTAGAGCTTGGACGCACAATCTGCGTCAAAGGTGATCTGACTTCAGGGGATGCAATTATTGCCACATCAACCAAA
AATGTACCACGTGCGGTTTTCCTTATGTTCAAAGATGGTGCAATGCAAGGCAACGCTTATGTAGAATGGGGCGGAGGAGC
ATCAGTCTCCATGTGGAACGCAACTAAAGTCATTCCATTGACAAATACTTCTCCACTAGGATATATTTGGGCCAGTGCCA
ACTTCCGGCAAGCAATTAATTACACTCCTATAGGCACAGGCGCACGCGCCATAGATTTCTCACTTCCAACATCACATTGG
TGGTCCGGTAGCGCTACATATGATAAGAATGTCCGGGGAATAGGATATGTTGAATTTAACGGTACATGTTTGTTAGGCGT
TCAAAATGGTCTGTCAAGCAATGGGGTTTGGTCCCACCGCCTATATGTATCCAACATCACGAATAATCCCGGAACTTCAG
CAATGGCTAATGGCTTTATCTTCGATTCACGTGAAGGAAGTACAACAGGAACAGGCAGTATCCCCGGAACGGGGTATGCG
GTAACTGGTATGACATCTTCAGCCTCGTTCGTTTCTGGCAAACAGGTACTTGGTACCAACGTTGATGAAACAGGAGATGT
TGTATTCGGTCGAAGTGCTGATGGCAATGCCGTTCAGGTCTATATGTTGACTACGGATCAGGGACTATTTGCTTATGAAA
TTACCAGATTCAATTTATAA

Upstream 100 bases:

>100_bases
ATATACAATTTTCCCTATTCCATACACAGAACTTCAAGACAACACACTCTGTGAACAAAATGAACTGTGGAAATAATAAT
TATTTAATAAGAGAAAAATT

Downstream 100 bases:

>100_bases
ATGAAAATTTAAATATCATTTAAGATCATCTATAAACTACTCAGTAACAGTTGGCAATTACATATGAATAATTGCACAAC
TGTTGCTAAGTAGTTATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 619; Mature: 619

Protein sequence:

>619_residues
MKIKYLFTGVLISMLAFMSCEDPDDLARTGSENVTGLTITGCLASDESTTYSAIVDEASNTITIQVPYYISDTEKIQGDL
TQMKVSASLPVGAKFSPSISGIRDLVSGFQSTLVKEDGSKITYTFKAAYVKSKLASISKVELTDYSRATIRIVEPESTGG
TGKIIIYKTSSAIDAALKSAALTVSPWATIESSSLDPATGIIDLSNQPTITVIAQNETDKTVYQTSLELPDLLPQGVGYT
ASLFGFQIYTDDTHGFEVGANRTMAVIDDYLIISNSTDYNKMIVMDRYNGKVLDVKVNTTGIDAGRSIHAITSDDAGHLV
AMAYTSTLDANVTDPNVRAWVWPNGIENAPKSIVYANINGSTFANAPVGINGVKKLELGRTICVKGDLTSGDAIIATSTK
NVPRAVFLMFKDGAMQGNAYVEWGGGASVSMWNATKVIPLTNTSPLGYIWASANFRQAINYTPIGTGARAIDFSLPTSHW
WSGSATYDKNVRGIGYVEFNGTCLLGVQNGLSSNGVWSHRLYVSNITNNPGTSAMANGFIFDSREGSTTGTGSIPGTGYA
VTGMTSSASFVSGKQVLGTNVDETGDVVFGRSADGNAVQVYMLTTDQGLFAYEITRFNL

Sequences:

>Translated_619_residues
MKIKYLFTGVLISMLAFMSCEDPDDLARTGSENVTGLTITGCLASDESTTYSAIVDEASNTITIQVPYYISDTEKIQGDL
TQMKVSASLPVGAKFSPSISGIRDLVSGFQSTLVKEDGSKITYTFKAAYVKSKLASISKVELTDYSRATIRIVEPESTGG
TGKIIIYKTSSAIDAALKSAALTVSPWATIESSSLDPATGIIDLSNQPTITVIAQNETDKTVYQTSLELPDLLPQGVGYT
ASLFGFQIYTDDTHGFEVGANRTMAVIDDYLIISNSTDYNKMIVMDRYNGKVLDVKVNTTGIDAGRSIHAITSDDAGHLV
AMAYTSTLDANVTDPNVRAWVWPNGIENAPKSIVYANINGSTFANAPVGINGVKKLELGRTICVKGDLTSGDAIIATSTK
NVPRAVFLMFKDGAMQGNAYVEWGGGASVSMWNATKVIPLTNTSPLGYIWASANFRQAINYTPIGTGARAIDFSLPTSHW
WSGSATYDKNVRGIGYVEFNGTCLLGVQNGLSSNGVWSHRLYVSNITNNPGTSAMANGFIFDSREGSTTGTGSIPGTGYA
VTGMTSSASFVSGKQVLGTNVDETGDVVFGRSADGNAVQVYMLTTDQGLFAYEITRFNL
>Mature_619_residues
MKIKYLFTGVLISMLAFMSCEDPDDLARTGSENVTGLTITGCLASDESTTYSAIVDEASNTITIQVPYYISDTEKIQGDL
TQMKVSASLPVGAKFSPSISGIRDLVSGFQSTLVKEDGSKITYTFKAAYVKSKLASISKVELTDYSRATIRIVEPESTGG
TGKIIIYKTSSAIDAALKSAALTVSPWATIESSSLDPATGIIDLSNQPTITVIAQNETDKTVYQTSLELPDLLPQGVGYT
ASLFGFQIYTDDTHGFEVGANRTMAVIDDYLIISNSTDYNKMIVMDRYNGKVLDVKVNTTGIDAGRSIHAITSDDAGHLV
AMAYTSTLDANVTDPNVRAWVWPNGIENAPKSIVYANINGSTFANAPVGINGVKKLELGRTICVKGDLTSGDAIIATSTK
NVPRAVFLMFKDGAMQGNAYVEWGGGASVSMWNATKVIPLTNTSPLGYIWASANFRQAINYTPIGTGARAIDFSLPTSHW
WSGSATYDKNVRGIGYVEFNGTCLLGVQNGLSSNGVWSHRLYVSNITNNPGTSAMANGFIFDSREGSTTGTGSIPGTGYA
VTGMTSSASFVSGKQVLGTNVDETGDVVFGRSADGNAVQVYMLTTDQGLFAYEITRFNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65926; Mature: 65926

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKYLFTGVLISMLAFMSCEDPDDLARTGSENVTGLTITGCLASDESTTYSAIVDEASN
CEEEEEHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEEECCCC
TITIQVPYYISDTEKIQGDLTQMKVSASLPVGAKFSPSISGIRDLVSGFQSTLVKEDGSK
EEEEEEEEEECCCHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE
ITYTFKAAYVKSKLASISKVELTDYSRATIRIVEPESTGGTGKIIIYKTSSAIDAALKSA
EEEEEEEHHHHHHHHCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHC
ALTVSPWATIESSSLDPATGIIDLSNQPTITVIAQNETDKTVYQTSLELPDLLPQGVGYT
EEEECCCCEEECCCCCCCCCEEECCCCCEEEEEECCCCCCEEEEECCCCHHHCCCCCCCE
ASLFGFQIYTDDTHGFEVGANRTMAVIDDYLIISNSTDYNKMIVMDRYNGKVLDVKVNTT
EEEEEEEEEECCCCCEEECCCCEEEEEEEEEEEECCCCCCEEEEEECCCCEEEEEEEECC
GIDAGRSIHAITSDDAGHLVAMAYTSTLDANVTDPNVRAWVWPNGIENAPKSIVYANING
CCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCC
STFANAPVGINGVKKLELGRTICVKGDLTSGDAIIATSTKNVPRAVFLMFKDGAMQGNAY
CEECCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCEE
VEWGGGASVSMWNATKVIPLTNTSPLGYIWASANFRQAINYTPIGTGARAIDFSLPTSHW
EEECCCCEEEEECCEEEEEECCCCCCEEEEECCCCHHHCCCCCCCCCCEEEEECCCCCCC
WSGSATYDKNVRGIGYVEFNGTCLLGVQNGLSSNGVWSHRLYVSNITNNPGTSAMANGFI
CCCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCHHCCCEE
FDSREGSTTGTGSIPGTGYAVTGMTSSASFVSGKQVLGTNVDETGDVVFGRSADGNAVQV
EECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCEEEE
YMLTTDQGLFAYEITRFNL
EEEEECCCEEEEEEEEECC
>Mature Secondary Structure
MKIKYLFTGVLISMLAFMSCEDPDDLARTGSENVTGLTITGCLASDESTTYSAIVDEASN
CEEEEEHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEEECCCC
TITIQVPYYISDTEKIQGDLTQMKVSASLPVGAKFSPSISGIRDLVSGFQSTLVKEDGSK
EEEEEEEEEECCCHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE
ITYTFKAAYVKSKLASISKVELTDYSRATIRIVEPESTGGTGKIIIYKTSSAIDAALKSA
EEEEEEEHHHHHHHHCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHC
ALTVSPWATIESSSLDPATGIIDLSNQPTITVIAQNETDKTVYQTSLELPDLLPQGVGYT
EEEECCCCEEECCCCCCCCCEEECCCCCEEEEEECCCCCCEEEEECCCCHHHCCCCCCCE
ASLFGFQIYTDDTHGFEVGANRTMAVIDDYLIISNSTDYNKMIVMDRYNGKVLDVKVNTT
EEEEEEEEEECCCCCEEECCCCEEEEEEEEEEEECCCCCCEEEEEECCCCEEEEEEEECC
GIDAGRSIHAITSDDAGHLVAMAYTSTLDANVTDPNVRAWVWPNGIENAPKSIVYANING
CCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCC
STFANAPVGINGVKKLELGRTICVKGDLTSGDAIIATSTKNVPRAVFLMFKDGAMQGNAY
CEECCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCEE
VEWGGGASVSMWNATKVIPLTNTSPLGYIWASANFRQAINYTPIGTGARAIDFSLPTSHW
EEECCCCEEEEECCEEEEEECCCCCCEEEEECCCCHHHCCCCCCCCCCEEEEECCCCCCC
WSGSATYDKNVRGIGYVEFNGTCLLGVQNGLSSNGVWSHRLYVSNITNNPGTSAMANGFI
CCCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCHHCCCEE
FDSREGSTTGTGSIPGTGYAVTGMTSSASFVSGKQVLGTNVDETGDVVFGRSADGNAVQV
EECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCEEEE
YMLTTDQGLFAYEITRFNL
EEEEECCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA