Click here to switch to the map view.

The map label for this gene is nagA [H]

Identifier: 29348996

GI number: 29348996

Start: 4642439

End: 4643626

Strand: Reverse

Name: nagA [H]

Synonym: BT_3588

Alternate gene names: 29348996

Gene position: 4643626-4642439 (Counterclockwise)

Preceding gene: 29348997

Following gene: 29348995

Centisome position: 74.18

GC content: 45.29

Gene sequence:

>1188_bases
ATGGAAAGACTGATTATTATCAATGGGGAACTAATACTCCCTACCGGCATCGAAACCAATAAAATAATGGTTTGCCGGAA
TGGTAAGATAGAACAGATTGTATCATCCGAAGCATATATTCCTCAAGCTGACGACCGGATCATAGATGCCAACCAACAAT
ATGTCTCCCCAGGATTTATCGATATACATGTTCACGGTGGCGGAGGTCATGACTTTATGGATGGAACCGTAGAGGCCTTT
CTGGGAGTAGCCGAAACTCATGCCAGATATGGAACAACAGCCATGGTACCTACAACACTGACCAGCACAAACGAAGAGCT
AATGACGACCTTTGCCGTTTATCAAAAAGCCAAAAGTCTTAATAAAAAAGGTGCCCAATTTATCGGGCTGCATCTGGAAG
GGCCCTACTTCTCGCCTAAGCAGTGTGGAGCCCAAGACCCCAATCATTTGAAAACGCCTCATCCGGACGAATATAACACA
ATACTGGAAGCTTCACAAGATATTGTACGATGGAGTATTGCTCCGGAACTGGCAGGAGCAATTGAACTGGGGGAAAAGCT
CAATAGCTGTCACATTCTCCCATCCATCGCACATACCGATGCCATTTATGAAGAAGTGGTAAAAGCATACGAAGCAGGGT
ATACTCATATCACTCATTTATATTCAGCGATGTCAACCATCACCCGTAGAAATGCCTATCGCTATGCAGGTGTGGTAGAG
GCAGCTTATCTGATTGATGGTATGACAGTAGAAATCATTGCGGACGGCATTCATCTGCCCAAACCTTTACTACAATTCGT
ATATAAGTTCAAGGGGGCCGATAAAACAGCACTTTGCACAGATGCCATGCGAGGTGCGGGAATGCCGGACGGTGAATCCA
TATTAGGCAGCCTGACCAACGGTCAGAAAGTTATTATTGAAGACGGAGTAGCCAAACTTCCCGATCGTTCGGCATTTGCC
GGAAGCGTAGCTACCGCCGATCGTTTGGTAAGAACCATGATAAATATAGCCGGCATACCCCTAATCGATGCTATCCGAAT
GATAACCCTTACCCCCGCCCGCATTCTGCATGTGGATTCCCAAAAGGGTTCTTTGGAGGAAGGTAAAGATGCCGACATCG
TCACCTTCGACAATCAAATTAACGTAACAACAACTATATCAAAAGGCCATGTTATCTACAATCAATGA

Upstream 100 bases:

>100_bases
CTTATTCCTTGCTTTATCTATCTGGTATTCTTTGCCATCAAAGGGCATAAAATCAACTCCTGGAGATAAAACTGAACGTA
AGACATTAAAAATTAAAAAA

Downstream 100 bases:

>100_bases
AACATACCTGTTTCAACAAGATCTATTAACAGTCAAAATGTTCCCTTCTATCCAACAGATGGGGAAATGTGCTGCGACAG
AAGTTACTAACAAAATATGC

Product: N-acetylglucosamine-6-phosphate deacetylase

Products: NA

Alternate protein names: GlcNAc 6-P deacetylase [H]

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MERLIIINGELILPTGIETNKIMVCRNGKIEQIVSSEAYIPQADDRIIDANQQYVSPGFIDIHVHGGGGHDFMDGTVEAF
LGVAETHARYGTTAMVPTTLTSTNEELMTTFAVYQKAKSLNKKGAQFIGLHLEGPYFSPKQCGAQDPNHLKTPHPDEYNT
ILEASQDIVRWSIAPELAGAIELGEKLNSCHILPSIAHTDAIYEEVVKAYEAGYTHITHLYSAMSTITRRNAYRYAGVVE
AAYLIDGMTVEIIADGIHLPKPLLQFVYKFKGADKTALCTDAMRGAGMPDGESILGSLTNGQKVIIEDGVAKLPDRSAFA
GSVATADRLVRTMINIAGIPLIDAIRMITLTPARILHVDSQKGSLEEGKDADIVTFDNQINVTTTISKGHVIYNQ

Sequences:

>Translated_395_residues
MERLIIINGELILPTGIETNKIMVCRNGKIEQIVSSEAYIPQADDRIIDANQQYVSPGFIDIHVHGGGGHDFMDGTVEAF
LGVAETHARYGTTAMVPTTLTSTNEELMTTFAVYQKAKSLNKKGAQFIGLHLEGPYFSPKQCGAQDPNHLKTPHPDEYNT
ILEASQDIVRWSIAPELAGAIELGEKLNSCHILPSIAHTDAIYEEVVKAYEAGYTHITHLYSAMSTITRRNAYRYAGVVE
AAYLIDGMTVEIIADGIHLPKPLLQFVYKFKGADKTALCTDAMRGAGMPDGESILGSLTNGQKVIIEDGVAKLPDRSAFA
GSVATADRLVRTMINIAGIPLIDAIRMITLTPARILHVDSQKGSLEEGKDADIVTFDNQINVTTTISKGHVIYNQ
>Mature_395_residues
MERLIIINGELILPTGIETNKIMVCRNGKIEQIVSSEAYIPQADDRIIDANQQYVSPGFIDIHVHGGGGHDFMDGTVEAF
LGVAETHARYGTTAMVPTTLTSTNEELMTTFAVYQKAKSLNKKGAQFIGLHLEGPYFSPKQCGAQDPNHLKTPHPDEYNT
ILEASQDIVRWSIAPELAGAIELGEKLNSCHILPSIAHTDAIYEEVVKAYEAGYTHITHLYSAMSTITRRNAYRYAGVVE
AAYLIDGMTVEIIADGIHLPKPLLQFVYKFKGADKTALCTDAMRGAGMPDGESILGSLTNGQKVIIEDGVAKLPDRSAFA
GSVATADRLVRTMINIAGIPLIDAIRMITLTPARILHVDSQKGSLEEGKDADIVTFDNQINVTTTISKGHVIYNQ

Specific function: N-acetylglucosamine utilization. [C]

COG id: COG1820

COG function: function code G; N-acetylglucosamine-6-phosphate deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nagA family [H]

Homologues:

Organism=Homo sapiens, GI21361513, Length=440, Percent_Identity=28.8636363636364, Blast_Score=135, Evalue=9e-32,
Organism=Homo sapiens, GI224922791, Length=438, Percent_Identity=29.2237442922374, Blast_Score=132, Evalue=7e-31,
Organism=Escherichia coli, GI1786892, Length=377, Percent_Identity=30.2387267904509, Blast_Score=157, Evalue=8e-40,
Organism=Caenorhabditis elegans, GI17553768, Length=407, Percent_Identity=30.4668304668305, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI19920392, Length=355, Percent_Identity=29.5774647887324, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI281361140, Length=369, Percent_Identity=28.7262872628726, Blast_Score=126, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR003764
- InterPro:   IPR011059 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: =3.5.1.25 [H]

Molecular weight: Translated: 42998; Mature: 42998

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLIIINGELILPTGIETNKIMVCRNGKIEQIVSSEAYIPQADDRIIDANQQYVSPGFI
CCEEEEEECCEEEECCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCEECCCCCCCCCCEE
DIHVHGGGGHDFMDGTVEAFLGVAETHARYGTTAMVPTTLTSTNEELMTTFAVYQKAKSL
EEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHH
NKKGAQFIGLHLEGPYFSPKQCGAQDPNHLKTPHPDEYNTILEASQDIVRWSIAPELAGA
CCCCCEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCHHHHEEECCHHHHHH
IELGEKLNSCHILPSIAHTDAIYEEVVKAYEAGYTHITHLYSAMSTITRRNAYRYAGVVE
HHHHHHCCCCEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
AAYLIDGMTVEIIADGIHLPKPLLQFVYKFKGADKTALCTDAMRGAGMPDGESILGSLTN
HHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHCCC
GQKVIIEDGVAKLPDRSAFAGSVATADRLVRTMINIAGIPLIDAIRMITLTPARILHVDS
CCEEEEECCCHHCCCCCHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHEECCEEEEEECC
QKGSLEEGKDADIVTFDNQINVTTTISKGHVIYNQ
CCCCCCCCCCCCEEEECCEEEEEEEEECCEEEECC
>Mature Secondary Structure
MERLIIINGELILPTGIETNKIMVCRNGKIEQIVSSEAYIPQADDRIIDANQQYVSPGFI
CCEEEEEECCEEEECCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCEECCCCCCCCCCEE
DIHVHGGGGHDFMDGTVEAFLGVAETHARYGTTAMVPTTLTSTNEELMTTFAVYQKAKSL
EEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHH
NKKGAQFIGLHLEGPYFSPKQCGAQDPNHLKTPHPDEYNTILEASQDIVRWSIAPELAGA
CCCCCEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCHHHHEEECCHHHHHH
IELGEKLNSCHILPSIAHTDAIYEEVVKAYEAGYTHITHLYSAMSTITRRNAYRYAGVVE
HHHHHHCCCCEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
AAYLIDGMTVEIIADGIHLPKPLLQFVYKFKGADKTALCTDAMRGAGMPDGESILGSLTN
HHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHCCC
GQKVIIEDGVAKLPDRSAFAGSVATADRLVRTMINIAGIPLIDAIRMITLTPARILHVDS
CCEEEEECCCHHCCCCCHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHEECCEEEEEECC
QKGSLEEGKDADIVTFDNQINVTTTISKGHVIYNQ
CCCCCCCCCCCCEEEECCEEEEEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA