| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348899
Identifier: 29348899
GI number: 29348899
Start: 4501182
End: 4502531
Strand: Reverse
Name: 29348899
Synonym: BT_3490
Alternate gene names: NA
Gene position: 4502531-4501182 (Counterclockwise)
Preceding gene: 29348917
Following gene: 29348889
Centisome position: 71.92
GC content: 35.19
Gene sequence:
>1350_bases ATGAAATTCTATAATAGAGAAAAAGAAGTTGCGGAATTGAAGCGTGTGCAAGAGCTTGCATTTACTCAAAATTCCAGAAT GATTGTGGTCACAGGACGTAGACGCATTGGTAAAACCAGTCTCATAAAGGAGGCTTTGAAAGGAACGCCTACAGTTTATT TATTCATTGGAAGAAAAGCTGAAAGCATATTAGTTACTGATTTTGTAAAGATAGTACGTGAAACTCTATCCATATTCGTT CCTGAAGGAATACCTACTTTTACCAATTTGATGCAATATCTTTTTGAAGTTGGTAAAACACGTGCTTTTAATATTGTCAT AGATGAATTTCAAGAGTTTTATAATATCCGACCTGACGTCTTTAGTGATATGCAGAATCTTTGGGATGAGTATAAACAAG AAACTAAAATAAATTTGGTCATCAGTGGTTCTGTGTACTCCTTAATGCAGAAAATATTCACTGATCATAATGAACCCCTA TTTGGGCGTGCTGACAATATTTTATGTCTGCGTGCTTTTAAGATCGGTGTCCTGAAACAAATAATGGAGGATCTTGCTTC CGGATATAGCAATGATGACTTATTAGCTTTATACACGTTGACAGGAGGAATCCCTAAATATGTAGAGTTGTTTTGTGATA ACCAAGCGCTTACTATAGATAAGATGTATGACTTTGTCTTTTCGGAAAACTCCTTGTTTATAGATGAAGGACGTAATTTA TTGATAACTGAGTTTGGGAAAAACTATGGTACCTATTTTTCCATTTTGTCAGAAATCGCCAACGGGCACTATACGCAAGG CGAGATAGAATCGGCATTGGGCGGTACAGCTATCGGAGGTTATTTAAGCAAACTGGAGAATGTATACAATTTAATAACCC GGGAACGTCCTATTTTTGCAAAACCCGGAACTAAGAAAAATGTACGATATGTTATTGGTGATAATTTCTTGAATTTCTGG TTTAAATATATTGAGCAGAATCGCTCTTATATTGAATTACAGAATTTTGATGATTTGAGACAATTAGCAAAAGCTGATTA TCCGACCTATTCAGGTAGGGTGTTAGAGAAATACTTCAAACAGAAACTGGCAGAAACCGGAGGTTTCAAGGAAATAGGCT CTTGGTGGGAAACAAAAAGTTCTATTGGCAAACAACGAATAAATTCTTATGAAATAGATATTGTTGCTCTTAAATCCAGT GGTAAGAAAGCTCTTATTGCTGAAGTTAAACGAGTTCCTGAGAACAACTATAGCCATACTGTTTTCATGGAGAAAGTGGA ACATTTAAAACAAAAAGAAATGTCTAAATATGATATTGAGACACAAGTTCTGGGATTGAAAGATATGTAA
Upstream 100 bases:
>100_bases ACATTCATAATTTGCATGCTAAAATTGATTGTTCTCAATTTATTTTGTATTTTCGCAACAGCGGTTGAGTCAATGGCCGT TGAGAAAACAAATCATCATT
Downstream 100 bases:
>100_bases ATATAATAAAGAGGCTGTCTTATAATTGAGTAGTCTCTCGAATTAATAACACATACCCTGCATTTCGGAATGCCTCGGCC CGATTCATTCAGCGTGTTAC
Product: putative ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MKFYNREKEVAELKRVQELAFTQNSRMIVVTGRRRIGKTSLIKEALKGTPTVYLFIGRKAESILVTDFVKIVRETLSIFV PEGIPTFTNLMQYLFEVGKTRAFNIVIDEFQEFYNIRPDVFSDMQNLWDEYKQETKINLVISGSVYSLMQKIFTDHNEPL FGRADNILCLRAFKIGVLKQIMEDLASGYSNDDLLALYTLTGGIPKYVELFCDNQALTIDKMYDFVFSENSLFIDEGRNL LITEFGKNYGTYFSILSEIANGHYTQGEIESALGGTAIGGYLSKLENVYNLITRERPIFAKPGTKKNVRYVIGDNFLNFW FKYIEQNRSYIELQNFDDLRQLAKADYPTYSGRVLEKYFKQKLAETGGFKEIGSWWETKSSIGKQRINSYEIDIVALKSS GKKALIAEVKRVPENNYSHTVFMEKVEHLKQKEMSKYDIETQVLGLKDM
Sequences:
>Translated_449_residues MKFYNREKEVAELKRVQELAFTQNSRMIVVTGRRRIGKTSLIKEALKGTPTVYLFIGRKAESILVTDFVKIVRETLSIFV PEGIPTFTNLMQYLFEVGKTRAFNIVIDEFQEFYNIRPDVFSDMQNLWDEYKQETKINLVISGSVYSLMQKIFTDHNEPL FGRADNILCLRAFKIGVLKQIMEDLASGYSNDDLLALYTLTGGIPKYVELFCDNQALTIDKMYDFVFSENSLFIDEGRNL LITEFGKNYGTYFSILSEIANGHYTQGEIESALGGTAIGGYLSKLENVYNLITRERPIFAKPGTKKNVRYVIGDNFLNFW FKYIEQNRSYIELQNFDDLRQLAKADYPTYSGRVLEKYFKQKLAETGGFKEIGSWWETKSSIGKQRINSYEIDIVALKSS GKKALIAEVKRVPENNYSHTVFMEKVEHLKQKEMSKYDIETQVLGLKDM >Mature_449_residues MKFYNREKEVAELKRVQELAFTQNSRMIVVTGRRRIGKTSLIKEALKGTPTVYLFIGRKAESILVTDFVKIVRETLSIFV PEGIPTFTNLMQYLFEVGKTRAFNIVIDEFQEFYNIRPDVFSDMQNLWDEYKQETKINLVISGSVYSLMQKIFTDHNEPL FGRADNILCLRAFKIGVLKQIMEDLASGYSNDDLLALYTLTGGIPKYVELFCDNQALTIDKMYDFVFSENSLFIDEGRNL LITEFGKNYGTYFSILSEIANGHYTQGEIESALGGTAIGGYLSKLENVYNLITRERPIFAKPGTKKNVRYVIGDNFLNFW FKYIEQNRSYIELQNFDDLRQLAKADYPTYSGRVLEKYFKQKLAETGGFKEIGSWWETKSSIGKQRINSYEIDIVALKSS GKKALIAEVKRVPENNYSHTVFMEKVEHLKQKEMSKYDIETQVLGLKDM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011579 - InterPro: IPR004256 - InterPro: IPR011335 - InterPro: IPR011991 [H]
Pfam domain/function: PF01637 Arch_ATPase; PF03008 DUF234 [H]
EC number: NA
Molecular weight: Translated: 51856; Mature: 51856
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFYNREKEVAELKRVQELAFTQNSRMIVVTGRRRIGKTSLIKEALKGTPTVYLFIGRKA CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCC ESILVTDFVKIVRETLSIFVPEGIPTFTNLMQYLFEVGKTRAFNIVIDEFQEFYNIRPDV CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCHH FSDMQNLWDEYKQETKINLVISGSVYSLMQKIFTDHNEPLFGRADNILCLRAFKIGVLKQ HHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHH IMEDLASGYSNDDLLALYTLTGGIPKYVELFCDNQALTIDKMYDFVFSENSLFIDEGRNL HHHHHHCCCCCCCEEEEEEECCCCHHHHHHHCCCCEEEHHHHHHHHHCCCCEEEECCCCE LITEFGKNYGTYFSILSEIANGHYTQGEIESALGGTAIGGYLSKLENVYNLITRERPIFA EEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEE KPGTKKNVRYVIGDNFLNFWFKYIEQNRSYIELQNFDDLRQLAKADYPTYSGRVLEKYFK CCCCCCCCEEEECCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCCCCHHHHHHHH QKLAETGGFKEIGSWWETKSSIGKQRINSYEIDIVALKSSGKKALIAEVKRVPENNYSHT HHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCHH VFMEKVEHLKQKEMSKYDIETQVLGLKDM HHHHHHHHHHHHHHHHHCCHHHEECCCCC >Mature Secondary Structure MKFYNREKEVAELKRVQELAFTQNSRMIVVTGRRRIGKTSLIKEALKGTPTVYLFIGRKA CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCC ESILVTDFVKIVRETLSIFVPEGIPTFTNLMQYLFEVGKTRAFNIVIDEFQEFYNIRPDV CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCHH FSDMQNLWDEYKQETKINLVISGSVYSLMQKIFTDHNEPLFGRADNILCLRAFKIGVLKQ HHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHH IMEDLASGYSNDDLLALYTLTGGIPKYVELFCDNQALTIDKMYDFVFSENSLFIDEGRNL HHHHHHCCCCCCCEEEEEEECCCCHHHHHHHCCCCEEEHHHHHHHHHCCCCEEEECCCCE LITEFGKNYGTYFSILSEIANGHYTQGEIESALGGTAIGGYLSKLENVYNLITRERPIFA EEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEE KPGTKKNVRYVIGDNFLNFWFKYIEQNRSYIELQNFDDLRQLAKADYPTYSGRVLEKYFK CCCCCCCCEEEECCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCCCCHHHHHHHH QKLAETGGFKEIGSWWETKSSIGKQRINSYEIDIVALKSSGKKALIAEVKRVPENNYSHT HHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCHH VFMEKVEHLKQKEMSKYDIETQVLGLKDM HHHHHHHHHHHHHHHHHCCHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]