Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348847

Identifier: 29348847

GI number: 29348847

Start: 4429534

End: 4429956

Strand: Reverse

Name: 29348847

Synonym: BT_3438

Alternate gene names: NA

Gene position: 4429956-4429534 (Counterclockwise)

Preceding gene: 29348848

Following gene: 29348846

Centisome position: 70.76

GC content: 30.26

Gene sequence:

>423_bases
ATGAATACAATCAAAACGCTTCTATTATTATCATTTAGCATCCTATTATTTAACTGTAGTGATGAAGAAGATAAGAAAAC
TGAAAAAGAGTTTATCTTTAGCGCAAGTGAATTAAAACAAACTGAATGGGAAGGAGAATTCCTTTACCTAACAAATGGAG
AAATTGACTCAAAAGGATCGATAAAAATCGTTTTTTATACAGAAAAAAAAGGTGTTTGTGAGTATAAATTTGATTATCAT
ATTGATCCTGAGACAATAAGTTTTGAATATGAAATCAGTGACAAATTTATGTACATTGATGGTCCTCTTCCTATTCATGG
AAATTGGATACAACAAAAATACAACGGAAATTCTCTAGAAATTGCTGATAGCAAAGCGGCTTTTACCAATTCTCGCATGA
TAAAATTAACGAGAGTCAACTAG

Upstream 100 bases:

>100_bases
TAGTAACAATAAACAGAATTAATGTTCCTAATAAACATAGATTTATTAGGAACATTAATAATAAAACATTATCTTTATTC
AGACTTAACAAATAACTATT

Downstream 100 bases:

>100_bases
TAAAACCTTTTTCTACTAACAATTACCATTCCAAGGAAATAGCCTGAAAATAGGAGTCTTACATCTGTCTAATAGCAGAT
GCATTATTCCTTTTTATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNTIKTLLLLSFSILLFNCSDEEDKKTEKEFIFSASELKQTEWEGEFLYLTNGEIDSKGSIKIVFYTEKKGVCEYKFDYH
IDPETISFEYEISDKFMYIDGPLPIHGNWIQQKYNGNSLEIADSKAAFTNSRMIKLTRVN

Sequences:

>Translated_140_residues
MNTIKTLLLLSFSILLFNCSDEEDKKTEKEFIFSASELKQTEWEGEFLYLTNGEIDSKGSIKIVFYTEKKGVCEYKFDYH
IDPETISFEYEISDKFMYIDGPLPIHGNWIQQKYNGNSLEIADSKAAFTNSRMIKLTRVN
>Mature_140_residues
MNTIKTLLLLSFSILLFNCSDEEDKKTEKEFIFSASELKQTEWEGEFLYLTNGEIDSKGSIKIVFYTEKKGVCEYKFDYH
IDPETISFEYEISDKFMYIDGPLPIHGNWIQQKYNGNSLEIADSKAAFTNSRMIKLTRVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16310; Mature: 16310

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTIKTLLLLSFSILLFNCSDEEDKKTEKEFIFSASELKQTEWEGEFLYLTNGEIDSKGS
CCHHHHHHHHEEEEEEEECCCCCHHHHHHHHEEEHHHHCCCCCCCCEEEEECCCCCCCCC
IKIVFYTEKKGVCEYKFDYHIDPETISFEYEISDKFMYIDGPLPIHGNWIQQKYNGNSLE
EEEEEEECCCCCEEEEEEEEECCCEEEEEEEECCEEEEECCCCCCCCCEEEEEECCCEEE
IADSKAAFTNSRMIKLTRVN
EECCCCEECCCEEEEEEECC
>Mature Secondary Structure
MNTIKTLLLLSFSILLFNCSDEEDKKTEKEFIFSASELKQTEWEGEFLYLTNGEIDSKGS
CCHHHHHHHHEEEEEEEECCCCCHHHHHHHHEEEHHHHCCCCCCCCEEEEECCCCCCCCC
IKIVFYTEKKGVCEYKFDYHIDPETISFEYEISDKFMYIDGPLPIHGNWIQQKYNGNSLE
EEEEEEECCCCCEEEEEEEEECCCEEEEEEEECCEEEEECCCCCCCCCEEEEEECCCEEE
IADSKAAFTNSRMIKLTRVN
EECCCCEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA