Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348707

Identifier: 29348707

GI number: 29348707

Start: 4227668

End: 4229080

Strand: Reverse

Name: 29348707

Synonym: BT_3298

Alternate gene names: NA

Gene position: 4229080-4227668 (Counterclockwise)

Preceding gene: 29348708

Following gene: 29348706

Centisome position: 67.55

GC content: 39.7

Gene sequence:

>1413_bases
ATGAAAAAAGAGCACATGAAAAAGCAATATCCCCATTGGTGCGGGGTATTGCTACTGTATCTGATGGCATGTATTAGTAG
TTGCCAAGACGACAAAATCAGTTCTAGCGGATATGATCCGTCTAAACCTGTTGTTTTTACAGATTTCTCTCCAAGTCAGG
GAAGTCTCCGTACTCAGCTCCATATCTACGGTGAGAACTTCGGAAACGACCCATCAAAAATTTATATTACTGTAGGAGGG
CGAACTACCACTACAATTGGCTGTAACAATAATGAAATTTATTGTATGATACCCCCAAAAGCTTTTGATGGAAATATAAA
AATATCTATCGAAAGTGCTGATGGGACGTCTTCACCCATAGAATATGAATTTGAGAGACGTTTCCAATATGTATCTCAAA
CTTCAGTAGGTACATTAGTAGGAAACGAAGATGAACAAGGCAATTCTTCTGATGTAGATGGAGATTTTGAAAACGCAAGG
TTCGGAAATGCAGAATGGTTGTTAATGGATACATTCGGAATACAAAAATGCTTGATCGTTAATGGTTTTAAAGGACCTAT
CCGGAGAATCAATCTGGAAACTCAAGAAGTATCCACACTTATGACTGAAGGGCAAGGATTGTTTGGAGGTATGTACTACA
TGTGTTTCGATGCGACTGGAGACACTTTATTTGTATCAGACGACCACGGACAAAGTAACAAAGACCGAAGAGAGATTGCC
TACCTGCTACGCTCTGAAGACTTCCGAAGAGCAAGACCTTATGTTTATGATCGTACTGGATATAGTTGCGCTTATCAACC
TTTGACAAAAACTCTATATTATACCGTTTATTGGCAGGGAACTATTGACAAAGCCGTTTTTGACCCGACAACACAAGGAA
TGGTAGCAAAAGAAGTATTCCCAACATATGAAAGCAGGAATGAACATGCCTACCTAACAGTACACCCTGAAGGTAAATAT
ATGTATATTACAGGAGCAAATTGCCTTTATAAATCCATGTTCAATCCAGAAACAAAAGAATTCCAAAAGCCAACAATGTT
TGCCGGTTCTGAAGGAGCCAGTGATTGGGTAGACTCTCCCGGTACATCAGGGCGTTTCGTATGGCCTTATCAAGGCACAT
TTGTAAAAAACAAGGATTACATAGAAGCTGGTAAATCAGATATTTACGATTTTTATCTTTGTGATAGAAACGGACATTGC
ATCCGTAAAATAACTCCTGACGGTATCATCTCGACTTATGCCGGCAGAGGTAGTGTATCTTCTGATGGACGAGTAAACGG
ATACATAGACGGCGAGCTACGCACAGAAGCACGTTTCGACAGTCCTTGTGGGATCGCTTATGATGAAGAAACACAAACAT
TCTATATAGCAGATAGAGAAAACCATCGAATTCGCACAATTTCTGTAGAATAA

Upstream 100 bases:

>100_bases
TCAAGGCATACGTCAAGCCAGTGGAAATCTAGTGGAAGGTATTGAAATAAGACTATAAAAAAGCACTATACTTTGTTTGG
AAACCTAAAAAAAAAGTTTT

Downstream 100 bases:

>100_bases
ACTATAAAAACACATTTCGAATGAAAAAATATATTTTAAGTTTGTTTTTTCTAATTAGCTGTGTGCTTAACACATACGCA
CATACAGAAAAACAACAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MKKEHMKKQYPHWCGVLLLYLMACISSCQDDKISSSGYDPSKPVVFTDFSPSQGSLRTQLHIYGENFGNDPSKIYITVGG
RTTTTIGCNNNEIYCMIPPKAFDGNIKISIESADGTSSPIEYEFERRFQYVSQTSVGTLVGNEDEQGNSSDVDGDFENAR
FGNAEWLLMDTFGIQKCLIVNGFKGPIRRINLETQEVSTLMTEGQGLFGGMYYMCFDATGDTLFVSDDHGQSNKDRREIA
YLLRSEDFRRARPYVYDRTGYSCAYQPLTKTLYYTVYWQGTIDKAVFDPTTQGMVAKEVFPTYESRNEHAYLTVHPEGKY
MYITGANCLYKSMFNPETKEFQKPTMFAGSEGASDWVDSPGTSGRFVWPYQGTFVKNKDYIEAGKSDIYDFYLCDRNGHC
IRKITPDGIISTYAGRGSVSSDGRVNGYIDGELRTEARFDSPCGIAYDEETQTFYIADRENHRIRTISVE

Sequences:

>Translated_470_residues
MKKEHMKKQYPHWCGVLLLYLMACISSCQDDKISSSGYDPSKPVVFTDFSPSQGSLRTQLHIYGENFGNDPSKIYITVGG
RTTTTIGCNNNEIYCMIPPKAFDGNIKISIESADGTSSPIEYEFERRFQYVSQTSVGTLVGNEDEQGNSSDVDGDFENAR
FGNAEWLLMDTFGIQKCLIVNGFKGPIRRINLETQEVSTLMTEGQGLFGGMYYMCFDATGDTLFVSDDHGQSNKDRREIA
YLLRSEDFRRARPYVYDRTGYSCAYQPLTKTLYYTVYWQGTIDKAVFDPTTQGMVAKEVFPTYESRNEHAYLTVHPEGKY
MYITGANCLYKSMFNPETKEFQKPTMFAGSEGASDWVDSPGTSGRFVWPYQGTFVKNKDYIEAGKSDIYDFYLCDRNGHC
IRKITPDGIISTYAGRGSVSSDGRVNGYIDGELRTEARFDSPCGIAYDEETQTFYIADRENHRIRTISVE
>Mature_470_residues
MKKEHMKKQYPHWCGVLLLYLMACISSCQDDKISSSGYDPSKPVVFTDFSPSQGSLRTQLHIYGENFGNDPSKIYITVGG
RTTTTIGCNNNEIYCMIPPKAFDGNIKISIESADGTSSPIEYEFERRFQYVSQTSVGTLVGNEDEQGNSSDVDGDFENAR
FGNAEWLLMDTFGIQKCLIVNGFKGPIRRINLETQEVSTLMTEGQGLFGGMYYMCFDATGDTLFVSDDHGQSNKDRREIA
YLLRSEDFRRARPYVYDRTGYSCAYQPLTKTLYYTVYWQGTIDKAVFDPTTQGMVAKEVFPTYESRNEHAYLTVHPEGKY
MYITGANCLYKSMFNPETKEFQKPTMFAGSEGASDWVDSPGTSGRFVWPYQGTFVKNKDYIEAGKSDIYDFYLCDRNGHC
IRKITPDGIISTYAGRGSVSSDGRVNGYIDGELRTEARFDSPCGIAYDEETQTFYIADRENHRIRTISVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53190; Mature: 53190

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEHMKKQYPHWCGVLLLYLMACISSCQDDKISSSGYDPSKPVVFTDFSPSQGSLRTQL
CCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEE
HIYGENFGNDPSKIYITVGGRTTTTIGCNNNEIYCMIPPKAFDGNIKISIESADGTSSPI
EEEECCCCCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCC
EYEFERRFQYVSQTSVGTLVGNEDEQGNSSDVDGDFENARFGNAEWLLMDTFGIQKCLIV
EEHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEE
NGFKGPIRRINLETQEVSTLMTEGQGLFGGMYYMCFDATGDTLFVSDDHGQSNKDRREIA
ECCCCCEEEEECCHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHH
YLLRSEDFRRARPYVYDRTGYSCAYQPLTKTLYYTVYWQGTIDKAVFDPTTQGMVAKEVF
HHHHCCCHHHCCCEEEECCCCCEECCCCCCEEEEEEEECCCCCCEEECCCCCCEEHHHHC
PTYESRNEHAYLTVHPEGKYMYITGANCLYKSMFNPETKEFQKPTMFAGSEGASDWVDSP
CCCCCCCCEEEEEECCCCCEEEEECCHHHHHHHCCCCHHHHCCCCEECCCCCCCHHCCCC
GTSGRFVWPYQGTFVKNKDYIEAGKSDIYDFYLCDRNGHCIRKITPDGIISTYAGRGSVS
CCCCEEEECCCCEEECCCHHHHCCCCCCEEEEEECCCCCEEEEECCCCCEEECCCCCCCC
SDGRVNGYIDGELRTEARFDSPCGIAYDEETQTFYIADRENHRIRTISVE
CCCEEEEEECCEEEECCCCCCCCCCEECCCCCEEEEEECCCCEEEEEEEC
>Mature Secondary Structure
MKKEHMKKQYPHWCGVLLLYLMACISSCQDDKISSSGYDPSKPVVFTDFSPSQGSLRTQL
CCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEE
HIYGENFGNDPSKIYITVGGRTTTTIGCNNNEIYCMIPPKAFDGNIKISIESADGTSSPI
EEEECCCCCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCC
EYEFERRFQYVSQTSVGTLVGNEDEQGNSSDVDGDFENARFGNAEWLLMDTFGIQKCLIV
EEHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEE
NGFKGPIRRINLETQEVSTLMTEGQGLFGGMYYMCFDATGDTLFVSDDHGQSNKDRREIA
ECCCCCEEEEECCHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHH
YLLRSEDFRRARPYVYDRTGYSCAYQPLTKTLYYTVYWQGTIDKAVFDPTTQGMVAKEVF
HHHHCCCHHHCCCEEEECCCCCEECCCCCCEEEEEEEECCCCCCEEECCCCCCEEHHHHC
PTYESRNEHAYLTVHPEGKYMYITGANCLYKSMFNPETKEFQKPTMFAGSEGASDWVDSP
CCCCCCCCEEEEEECCCCCEEEEECCHHHHHHHCCCCHHHHCCCCEECCCCCCCHHCCCC
GTSGRFVWPYQGTFVKNKDYIEAGKSDIYDFYLCDRNGHCIRKITPDGIISTYAGRGSVS
CCCCEEEECCCCEEECCCHHHHCCCCCCEEEEEECCCCCEEEEECCCCCEEECCCCCCCC
SDGRVNGYIDGELRTEARFDSPCGIAYDEETQTFYIADRENHRIRTISVE
CCCEEEEEECCEEEECCCCCCCCCCEECCCCCEEEEEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA