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The map label for this gene is araC [C]

Identifier: 29348559

GI number: 29348559

Start: 4014407

End: 4014880

Strand: Reverse

Name: araC [C]

Synonym: BT_3150

Alternate gene names: 29348559

Gene position: 4014880-4014407 (Counterclockwise)

Preceding gene: 29348560

Following gene: 29348558

Centisome position: 64.13

GC content: 42.62

Gene sequence:

>474_bases
ATGCCTTGGTGGGAACAAAATATAGGTATGGGGGGGGGGGCACTTTCTGCTAAACAGCAGACCTCTGCTGATAGCAGAAC
AGAATCTTTACAATCACTTTCCGATGAGCGCAGAGATTTCATCCAGAAAAGTCTTGATGCATGGTGTGCGAATTTAGGAT
ATAAGGACAGTACTGTGAATATGCTTACCCTCTCTCGCACACTTTGTATCTCCAAGGATGAGTTATCTGTATTCTTCGAC
CAGTATCTGAAAACTACATTCAGAATATGGCTTGGTGATATACGTTTCAATGCGGCAAAGAAGATGATGTTGGAATTTCC
AGACTATAGTAATGACATTATTTCTGCCGAGTGTGGCTTCTCTGCCCGTACCTATCTGTACCGGATATTCAAGTCAAAGG
AAGGTTGTACGCCTACCGAATGGCGAGAAGAACAAGTTGCAAATGCAGCACCAGATGATAAAAAACAGGATTAA

Upstream 100 bases:

>100_bases
GTCGTATTGCTTGCCTTGCTGTTCTTCAATCTTACGTTTATCGCTCTCGGCAGCAGTTATATCCCTACCGAAGAACTCTT
GGATAAAGAAGTGGAAAACG

Downstream 100 bases:

>100_bases
CCATTTTTCAATAAATATCAGAAAAACGCATAATAAAAGGGAATAAATCGTTAAAATGGGTGTCTACTTCGTAGGAAGTA
GACACATTGACAGGGGAATG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MPWWEQNIGMGGGALSAKQQTSADSRTESLQSLSDERRDFIQKSLDAWCANLGYKDSTVNMLTLSRTLCISKDELSVFFD
QYLKTTFRIWLGDIRFNAAKKMMLEFPDYSNDIISAECGFSARTYLYRIFKSKEGCTPTEWREEQVANAAPDDKKQD

Sequences:

>Translated_157_residues
MPWWEQNIGMGGGALSAKQQTSADSRTESLQSLSDERRDFIQKSLDAWCANLGYKDSTVNMLTLSRTLCISKDELSVFFD
QYLKTTFRIWLGDIRFNAAKKMMLEFPDYSNDIISAECGFSARTYLYRIFKSKEGCTPTEWREEQVANAAPDDKKQD
>Mature_156_residues
PWWEQNIGMGGGALSAKQQTSADSRTESLQSLSDERRDFIQKSLDAWCANLGYKDSTVNMLTLSRTLCISKDELSVFFDQ
YLKTTFRIWLGDIRFNAAKKMMLEFPDYSNDIISAECGFSARTYLYRIFKSKEGCTPTEWREEQVANAAPDDKKQD

Specific function: This Protein Controls The Expression Of At Least Six Genes That Are Involved In The Transport And Catabolism Of L-Arabinose. It Regulates Initiation Of Transcription Of The Arabad Operon And It Also Controls Its Own Synthesis. The L- Arabinose Operon Dis

COG id: COG4753

COG function: function code T; Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18012; Mature: 17881

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPWWEQNIGMGGGALSAKQQTSADSRTESLQSLSDERRDFIQKSLDAWCANLGYKDSTVN
CCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
MLTLSRTLCISKDELSVFFDQYLKTTFRIWLGDIRFNAAKKMMLEFPDYSNDIISAECGF
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
SARTYLYRIFKSKEGCTPTEWREEQVANAAPDDKKQD
HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PWWEQNIGMGGGALSAKQQTSADSRTESLQSLSDERRDFIQKSLDAWCANLGYKDSTVN
CCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
MLTLSRTLCISKDELSVFFDQYLKTTFRIWLGDIRFNAAKKMMLEFPDYSNDIISAECGF
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
SARTYLYRIFKSKEGCTPTEWREEQVANAAPDDKKQD
HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA