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The map label for this gene is 29348488

Identifier: 29348488

GI number: 29348488

Start: 3903322

End: 3905082

Strand: Reverse

Name: 29348488

Synonym: BT_3079

Alternate gene names: NA

Gene position: 3905082-3903322 (Counterclockwise)

Preceding gene: 29348489

Following gene: 29348485

Centisome position: 62.38

GC content: 40.15

Gene sequence:

>1761_bases
ATGCAAAACAAGACGTTAGGGATTCTGATGATTATTCTCCTGCTGTTTTCTGCCTGTAAAGATGAAGAAACTCCTCTCTC
TTCAACGAAGCAATTAATCAGCTATTCGATTCAGAAGAGTGACAATCAAGGTAAAATTAAGAATGACGTGAGAGGTTCCA
TTAAAGGGAATGTGATAACGCTGTCAATGGATCAATATGATGACCTGAAGTCATTGATTGCTACATTCAAGTATGAAGGA
ACGTCTGTAAGCGTGAATGGAGTCGGGCAGGAATCCGGCATCACTTCGAATGATTTTTCCCGGCCGCTGATGATTCTCGT
AGAAGCAGAAGACGGCAGCAGGGAACAATATACAGTCGAAGTTGTCTTGAAAGATGCGCAGGTGTTATCCGAATTTCGCT
TTTTGAGAAAAGATAATGCTTTGCTGACTGCTGATGTTTCATGTACGATTGAAGATGAGACTATTGTATCTTCCTACACA
TTCCCACAATCGAAACTGATTCCTGTCTTTATGACTGATGCCGTGAAAGTAATGGTAGATGATGTAGAACAGGTCAGCGG
TGTGACGGAAATTGATTTCGCCTCTCCGGTCACTTATCAGTTTGTGATGCGGAATGGAGAAGTAGTCCGATACATCCTGA
CGCTGGACTTTATCCTGATTCCTCAGTTTACGATCACGACAGAAGACCCTAGTATAACGGAAATACCAAGTAAGGATTAT
TATTTGAATGCGACTCTCACCGTGGATGGCAAGGGGATTTATGAGAACTATACAGGCAAGACAGAGGTGAAAGGAAGGGG
AAACTCCACATGGGGATATCCGAAGAAACCTTACCGGTTAAAGCTTGATAAGAAATCTGAGATTTGTGGTTTGGGAAAAG
CGAAGAATTATGTATTACTGGCTAATCATATCGATCCTACCTTGATGCTTAACTCAGTTGCCTTCAAAGTCGGGCAATTG
CTGAATATTCCTTTCACCAATCATGCCATTCCGGTGGATGTGGTTCTGAATGGCAAATACAAAGGTTCCTATCTACTGAC
GGAACAGATAGAAATCAAAGAAAATCGTGTGGATTTGGATGAGAATAACAGCGTGATGTGGGAGCTTGATTCCTATTTTG
ATGAAGATCCGAAATTCAAGTCCGAAGCATTCAATCTTCCGGTGATGGTGAAAGACCCTGATTTGACTACAGAGCAGTTT
GAGTATTGGAAGAAAGATTTTAATGCATTTACCGTGCAGTTTGCAAAGGAGCCGTTAGAAGGAAATATGTATGTGGATAT
GATTGATATTGAATCAGTTGCAAAATATCTGATTACCTTTAATTTGGTACACAATATGGAGATTAACCATCCGAAAAGTA
TCTTTATTCATAAAGAGGGGAAGGGTAAGTATGTTATGGGACCGATTTGGGACTTTGACTGGGCGTATGATTACGAAGGT
AAAGAGACACATTTCAGGAGTTATGAAACTCCGCTCTTTTCTGATGATATGAATGGAGTGGGAACCGCCTTTTTCCAACG
CTTCCTACAAGATAGTCGGGTAAGGAAACTCTATAAAAACTTTTGGCAAGACTTTAAGTCAAATAAATTAAATGAGTTGT
TGCAGTATATAGATGATCAGGCCAAGCTTATTAAACCATCTGTAACGAGAAATAGTGAATTATGGGAAAACACCCGTTCC
TTTGATGCGAAAGTGATAGAACTGAAGAATTGGTTGAAAAATAGGGCAGAGTATATAGATGGTGAAGTAAATCAATACTG
A

Upstream 100 bases:

>100_bases
CTTTGTAAAGGAACGTTTTTTTGAAAGAAATATAGAGAATAATCCTGTGGTTACTTGGCAAAACCGTATATTTGCCAAGT
AACCATTTTTATTTAATACT

Downstream 100 bases:

>100_bases
TAGAGTTTCATATATTAGCATTTCACTTCTCAGTCATTAACACTTGACTTCTCAGATGTTAATACTTGTCGTATCAGGTA
TTAACACCTGAGAACTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: CotH Family Protein; Cell Wall Hydrolase/Autolysin

Number of amino acids: Translated: 586; Mature: 586

Protein sequence:

>586_residues
MQNKTLGILMIILLLFSACKDEETPLSSTKQLISYSIQKSDNQGKIKNDVRGSIKGNVITLSMDQYDDLKSLIATFKYEG
TSVSVNGVGQESGITSNDFSRPLMILVEAEDGSREQYTVEVVLKDAQVLSEFRFLRKDNALLTADVSCTIEDETIVSSYT
FPQSKLIPVFMTDAVKVMVDDVEQVSGVTEIDFASPVTYQFVMRNGEVVRYILTLDFILIPQFTITTEDPSITEIPSKDY
YLNATLTVDGKGIYENYTGKTEVKGRGNSTWGYPKKPYRLKLDKKSEICGLGKAKNYVLLANHIDPTLMLNSVAFKVGQL
LNIPFTNHAIPVDVVLNGKYKGSYLLTEQIEIKENRVDLDENNSVMWELDSYFDEDPKFKSEAFNLPVMVKDPDLTTEQF
EYWKKDFNAFTVQFAKEPLEGNMYVDMIDIESVAKYLITFNLVHNMEINHPKSIFIHKEGKGKYVMGPIWDFDWAYDYEG
KETHFRSYETPLFSDDMNGVGTAFFQRFLQDSRVRKLYKNFWQDFKSNKLNELLQYIDDQAKLIKPSVTRNSELWENTRS
FDAKVIELKNWLKNRAEYIDGEVNQY

Sequences:

>Translated_586_residues
MQNKTLGILMIILLLFSACKDEETPLSSTKQLISYSIQKSDNQGKIKNDVRGSIKGNVITLSMDQYDDLKSLIATFKYEG
TSVSVNGVGQESGITSNDFSRPLMILVEAEDGSREQYTVEVVLKDAQVLSEFRFLRKDNALLTADVSCTIEDETIVSSYT
FPQSKLIPVFMTDAVKVMVDDVEQVSGVTEIDFASPVTYQFVMRNGEVVRYILTLDFILIPQFTITTEDPSITEIPSKDY
YLNATLTVDGKGIYENYTGKTEVKGRGNSTWGYPKKPYRLKLDKKSEICGLGKAKNYVLLANHIDPTLMLNSVAFKVGQL
LNIPFTNHAIPVDVVLNGKYKGSYLLTEQIEIKENRVDLDENNSVMWELDSYFDEDPKFKSEAFNLPVMVKDPDLTTEQF
EYWKKDFNAFTVQFAKEPLEGNMYVDMIDIESVAKYLITFNLVHNMEINHPKSIFIHKEGKGKYVMGPIWDFDWAYDYEG
KETHFRSYETPLFSDDMNGVGTAFFQRFLQDSRVRKLYKNFWQDFKSNKLNELLQYIDDQAKLIKPSVTRNSELWENTRS
FDAKVIELKNWLKNRAEYIDGEVNQY
>Mature_586_residues
MQNKTLGILMIILLLFSACKDEETPLSSTKQLISYSIQKSDNQGKIKNDVRGSIKGNVITLSMDQYDDLKSLIATFKYEG
TSVSVNGVGQESGITSNDFSRPLMILVEAEDGSREQYTVEVVLKDAQVLSEFRFLRKDNALLTADVSCTIEDETIVSSYT
FPQSKLIPVFMTDAVKVMVDDVEQVSGVTEIDFASPVTYQFVMRNGEVVRYILTLDFILIPQFTITTEDPSITEIPSKDY
YLNATLTVDGKGIYENYTGKTEVKGRGNSTWGYPKKPYRLKLDKKSEICGLGKAKNYVLLANHIDPTLMLNSVAFKVGQL
LNIPFTNHAIPVDVVLNGKYKGSYLLTEQIEIKENRVDLDENNSVMWELDSYFDEDPKFKSEAFNLPVMVKDPDLTTEQF
EYWKKDFNAFTVQFAKEPLEGNMYVDMIDIESVAKYLITFNLVHNMEINHPKSIFIHKEGKGKYVMGPIWDFDWAYDYEG
KETHFRSYETPLFSDDMNGVGTAFFQRFLQDSRVRKLYKNFWQDFKSNKLNELLQYIDDQAKLIKPSVTRNSELWENTRS
FDAKVIELKNWLKNRAEYIDGEVNQY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67272; Mature: 67272

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNKTLGILMIILLLFSACKDEETPLSSTKQLISYSIQKSDNQGKIKNDVRGSIKGNVIT
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE
LSMDQYDDLKSLIATFKYEGTSVSVNGVGQESGITSNDFSRPLMILVEAEDGSREQYTVE
EECCCHHHHHHHHHHHEECCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEE
VVLKDAQVLSEFRFLRKDNALLTADVSCTIEDETIVSSYTFPQSKLIPVFMTDAVKVMVD
EEEHHHHHHHHHHHHHCCCCEEEEEEEEEEECCEEEEEECCCCCCEEEEEEHHHHHHHHH
DVEQVSGVTEIDFASPVTYQFVMRNGEVVRYILTLDFILIPQFTITTEDPSITEIPSKDY
HHHHHCCCEEECCCCCCEEEEEECCCCEEEEEEHHHHHEECCEEEECCCCCCEECCCCCE
YLNATLTVDGKGIYENYTGKTEVKGRGNSTWGYPKKPYRLKLDKKSEICGLGKAKNYVLL
EEEEEEEECCCEEECCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEE
ANHIDPTLMLNSVAFKVGQLLNIPFTNHAIPVDVVLNGKYKGSYLLTEQIEIKENRVDLD
EECCCHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCCC
ENNSVMWELDSYFDEDPKFKSEAFNLPVMVKDPDLTTEQFEYWKKDFNAFTVQFAKEPLE
CCCCEEEEEHHHCCCCCCCCHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCC
GNMYVDMIDIESVAKYLITFNLVHNMEINHPKSIFIHKEGKGKYVMGPIWDFDWAYDYEG
CCEEEEEEEHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCCEEECCCCCCCCEECCCC
KETHFRSYETPLFSDDMNGVGTAFFQRFLQDSRVRKLYKNFWQDFKSNKLNELLQYIDDQ
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCH
AKLIKPSVTRNSELWENTRSFDAKVIELKNWLKNRAEYIDGEVNQY
HHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQNKTLGILMIILLLFSACKDEETPLSSTKQLISYSIQKSDNQGKIKNDVRGSIKGNVIT
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE
LSMDQYDDLKSLIATFKYEGTSVSVNGVGQESGITSNDFSRPLMILVEAEDGSREQYTVE
EECCCHHHHHHHHHHHEECCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEE
VVLKDAQVLSEFRFLRKDNALLTADVSCTIEDETIVSSYTFPQSKLIPVFMTDAVKVMVD
EEEHHHHHHHHHHHHHCCCCEEEEEEEEEEECCEEEEEECCCCCCEEEEEEHHHHHHHHH
DVEQVSGVTEIDFASPVTYQFVMRNGEVVRYILTLDFILIPQFTITTEDPSITEIPSKDY
HHHHHCCCEEECCCCCCEEEEEECCCCEEEEEEHHHHHEECCEEEECCCCCCEECCCCCE
YLNATLTVDGKGIYENYTGKTEVKGRGNSTWGYPKKPYRLKLDKKSEICGLGKAKNYVLL
EEEEEEEECCCEEECCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEE
ANHIDPTLMLNSVAFKVGQLLNIPFTNHAIPVDVVLNGKYKGSYLLTEQIEIKENRVDLD
EECCCHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCCC
ENNSVMWELDSYFDEDPKFKSEAFNLPVMVKDPDLTTEQFEYWKKDFNAFTVQFAKEPLE
CCCCEEEEEHHHCCCCCCCCHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCC
GNMYVDMIDIESVAKYLITFNLVHNMEINHPKSIFIHKEGKGKYVMGPIWDFDWAYDYEG
CCEEEEEEEHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCCEEECCCCCCCCEECCCC
KETHFRSYETPLFSDDMNGVGTAFFQRFLQDSRVRKLYKNFWQDFKSNKLNELLQYIDDQ
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCH
AKLIKPSVTRNSELWENTRSFDAKVIELKNWLKNRAEYIDGEVNQY
HHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA