| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348429
Identifier: 29348429
GI number: 29348429
Start: 3819286
End: 3820827
Strand: Reverse
Name: 29348429
Synonym: BT_3020
Alternate gene names: NA
Gene position: 3820827-3819286 (Counterclockwise)
Preceding gene: 29348431
Following gene: 29348427
Centisome position: 61.03
GC content: 46.82
Gene sequence:
>1542_bases ATGATAGTTGCACTCTTTGCTTTATTGGCAAGCGGATGCGGTCATAGTCAACGGACGCTGGAGTTTCGTGGAATCTGTGT AGATGACCCGCAGGGAGAAAATGGATTATATAACCCGGGCAGGGGATTCCGGCTGGAAACCGCGGTGGATGTGCTGCACG AAAAAGACACTCCTACCGAAGAACTGAATGAATTGTCTGCTAAATATGTAGCAGATAGTGTTTCACTCTCACAGAGCTAC TTTTATCTGACTTATTTAATAGGTAAAGAACTGTCTGAAGAAAACTTCCGGACCATGCAGGCATATTTTGATGAACTGCA AAAGCAAGGAAAAAAGGCCGTACTGCGCTTTGCCTACGAACGCGACTTTATGGGACGGTCGCCTGTCGGTCCTACCGGCG AACAGATACTGGCGCACTTGGATCAATTAAAACCTTTCCTGGAGAAAAATAAAGACCTGATTCTGGTCGTACAAGCCGGA ATGATTGGCGCGTGGGGCGAATGGCACAGTTCGGTTCAGGGACTGGAAAACTCGGAAGAAACAAAGGCTGCCGTATTGGA AAAACTGCTTTCTGTGGTTCCTGCGGAGAGAAATGTACAAGTCAGACTCCCGGAATTTAAGAACCTGCTGAAAGATAAAC CGGAACTTTATAAGAGACTTTCTTTCCATGATGACTTCATTGTCATACGCCCCGACAGATGGGATGCCGATATGCACGAA GGGACACCGAAGTTCGATCAGATAGTGGCGGAATCTCCTTACCTCGTAGTAGACGGTGAACTGCCCTGGGGATTCTGGAG CGTGGGCGCTGATCCGGACAGTCCTTCTGCCGGATGGATTATTGACGGTATGCAGGCGGCGAGACGTTTATTCCTCCAGC ATTATACTTCGCTAAGTATCATACATAATTATAAGGAGCAACATCCCAACAACCGGTTTGACGAGAATAATCCGCCCGAA TATTCCATGGTGGTCTGGAAGAAAACGATGATAACGGAAGACTCCCTTCTCCAGCATCATATGCCGGTGTCCGACAGTTA CTTCCGGAAGAAAGACGGAACGAAGGTAAAACGCAATATGTTCGATTATATACGTGATCATCTGGGTTACCGGATTGAGC TTCAATCACTTCAGCTTCCCTCCAAATTCGTGAGTGGAAAGGAGAACGTCTTGAAACTGAGCTTGAAGAACAGAGGTTTT GCCACCGTATTTGGTGAACATCCTGTTTATTTTGTATTGATTGATGATGCAGGAGAGGTTACGGAATTTCCGACCGATGC CAATCCAAAGAACTGGCAACCGTTCGAACCAAAGGATTCTGCTTATACTTCGCTGATGCATACAGTGGATGTATCTCTTG AACTCCCTGCCTCGGTGACTGCCGGAACTTATAAGTTAGGTCTGTGGATACCGGACGGATCGGACAGACTCAGATATAAT CCTCGTTATGCCATCCATTGTGCCAATGGGGATACGGACTGGTGGATTTCTAAGGATGGAAAGTATGGCGTGAATGTATT GACTGCGGTTGAAGTGGAATAA
Upstream 100 bases:
>100_bases ATACAAAATGACCGGTAAATAATGCTTGTCACCGGATTTGTCATACATTTGTCCGGTAAACAAAATTATTACTATGAAAA GGAATTGGATAGGTAGCAGC
Downstream 100 bases:
>100_bases ATGATTTGTTTCTATGATAAAAGTGAAAGGCTTCGGGTATGATTACCGGTAGCCTTTTATTGTTGGGTATGGATTACTTT ATTAAGAATTATAAATCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MIVALFALLASGCGHSQRTLEFRGICVDDPQGENGLYNPGRGFRLETAVDVLHEKDTPTEELNELSAKYVADSVSLSQSY FYLTYLIGKELSEENFRTMQAYFDELQKQGKKAVLRFAYERDFMGRSPVGPTGEQILAHLDQLKPFLEKNKDLILVVQAG MIGAWGEWHSSVQGLENSEETKAAVLEKLLSVVPAERNVQVRLPEFKNLLKDKPELYKRLSFHDDFIVIRPDRWDADMHE GTPKFDQIVAESPYLVVDGELPWGFWSVGADPDSPSAGWIIDGMQAARRLFLQHYTSLSIIHNYKEQHPNNRFDENNPPE YSMVVWKKTMITEDSLLQHHMPVSDSYFRKKDGTKVKRNMFDYIRDHLGYRIELQSLQLPSKFVSGKENVLKLSLKNRGF ATVFGEHPVYFVLIDDAGEVTEFPTDANPKNWQPFEPKDSAYTSLMHTVDVSLELPASVTAGTYKLGLWIPDGSDRLRYN PRYAIHCANGDTDWWISKDGKYGVNVLTAVEVE
Sequences:
>Translated_513_residues MIVALFALLASGCGHSQRTLEFRGICVDDPQGENGLYNPGRGFRLETAVDVLHEKDTPTEELNELSAKYVADSVSLSQSY FYLTYLIGKELSEENFRTMQAYFDELQKQGKKAVLRFAYERDFMGRSPVGPTGEQILAHLDQLKPFLEKNKDLILVVQAG MIGAWGEWHSSVQGLENSEETKAAVLEKLLSVVPAERNVQVRLPEFKNLLKDKPELYKRLSFHDDFIVIRPDRWDADMHE GTPKFDQIVAESPYLVVDGELPWGFWSVGADPDSPSAGWIIDGMQAARRLFLQHYTSLSIIHNYKEQHPNNRFDENNPPE YSMVVWKKTMITEDSLLQHHMPVSDSYFRKKDGTKVKRNMFDYIRDHLGYRIELQSLQLPSKFVSGKENVLKLSLKNRGF ATVFGEHPVYFVLIDDAGEVTEFPTDANPKNWQPFEPKDSAYTSLMHTVDVSLELPASVTAGTYKLGLWIPDGSDRLRYN PRYAIHCANGDTDWWISKDGKYGVNVLTAVEVE >Mature_513_residues MIVALFALLASGCGHSQRTLEFRGICVDDPQGENGLYNPGRGFRLETAVDVLHEKDTPTEELNELSAKYVADSVSLSQSY FYLTYLIGKELSEENFRTMQAYFDELQKQGKKAVLRFAYERDFMGRSPVGPTGEQILAHLDQLKPFLEKNKDLILVVQAG MIGAWGEWHSSVQGLENSEETKAAVLEKLLSVVPAERNVQVRLPEFKNLLKDKPELYKRLSFHDDFIVIRPDRWDADMHE GTPKFDQIVAESPYLVVDGELPWGFWSVGADPDSPSAGWIIDGMQAARRLFLQHYTSLSIIHNYKEQHPNNRFDENNPPE YSMVVWKKTMITEDSLLQHHMPVSDSYFRKKDGTKVKRNMFDYIRDHLGYRIELQSLQLPSKFVSGKENVLKLSLKNRGF ATVFGEHPVYFVLIDDAGEVTEFPTDANPKNWQPFEPKDSAYTSLMHTVDVSLELPASVTAGTYKLGLWIPDGSDRLRYN PRYAIHCANGDTDWWISKDGKYGVNVLTAVEVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58457; Mature: 58457
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVALFALLASGCGHSQRTLEFRGICVDDPQGENGLYNPGRGFRLETAVDVLHEKDTPTE CHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCHH ELNELSAKYVADSVSLSQSYFYLTYLIGKELSEENFRTMQAYFDELQKQGKKAVLRFAYE HHHHHHHHHHHHHHHHCCHHEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDFMGRSPVGPTGEQILAHLDQLKPFLEKNKDLILVVQAGMIGAWGEWHSSVQGLENSEE HCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCHH TKAAVLEKLLSVVPAERNVQVRLPEFKNLLKDKPELYKRLSFHDDFIVIRPDRWDADMHE HHHHHHHHHHHHCCCCCCEEEECHHHHHHHCCCHHHHHHHCCCCCEEEECCCCCCCCHHC GTPKFDQIVAESPYLVVDGELPWGFWSVGADPDSPSAGWIIDGMQAARRLFLQHYTSLSI CCCHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH IHNYKEQHPNNRFDENNPPEYSMVVWKKTMITEDSLLQHHMPVSDSYFRKKDGTKVKRNM HHHHHHHCCCCCCCCCCCCCEEEEEEEEHHCCHHHHHHHCCCCCCCHHHCCCCCHHHHHH FDYIRDHLGYRIELQSLQLPSKFVSGKENVLKLSLKNRGFATVFGEHPVYFVLIDDAGEV HHHHHHHCCEEEEEECCCCCHHHHCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCC TEFPTDANPKNWQPFEPKDSAYTSLMHTVDVSLELPASVTAGTYKLGLWIPDGSDRLRYN CCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCEEEEEEEECCCCCCEEEC PRYAIHCANGDTDWWISKDGKYGVNVLTAVEVE CCEEEEECCCCCCEEEECCCCCCCEEEEEEEEC >Mature Secondary Structure MIVALFALLASGCGHSQRTLEFRGICVDDPQGENGLYNPGRGFRLETAVDVLHEKDTPTE CHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCHH ELNELSAKYVADSVSLSQSYFYLTYLIGKELSEENFRTMQAYFDELQKQGKKAVLRFAYE HHHHHHHHHHHHHHHHCCHHEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDFMGRSPVGPTGEQILAHLDQLKPFLEKNKDLILVVQAGMIGAWGEWHSSVQGLENSEE HCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCHH TKAAVLEKLLSVVPAERNVQVRLPEFKNLLKDKPELYKRLSFHDDFIVIRPDRWDADMHE HHHHHHHHHHHHCCCCCCEEEECHHHHHHHCCCHHHHHHHCCCCCEEEECCCCCCCCHHC GTPKFDQIVAESPYLVVDGELPWGFWSVGADPDSPSAGWIIDGMQAARRLFLQHYTSLSI CCCHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH IHNYKEQHPNNRFDENNPPEYSMVVWKKTMITEDSLLQHHMPVSDSYFRKKDGTKVKRNM HHHHHHHCCCCCCCCCCCCCEEEEEEEEHHCCHHHHHHHCCCCCCCHHHCCCCCHHHHHH FDYIRDHLGYRIELQSLQLPSKFVSGKENVLKLSLKNRGFATVFGEHPVYFVLIDDAGEV HHHHHHHCCEEEEEECCCCCHHHHCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCC TEFPTDANPKNWQPFEPKDSAYTSLMHTVDVSLELPASVTAGTYKLGLWIPDGSDRLRYN CCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCEEEEEEEECCCCCCEEEC PRYAIHCANGDTDWWISKDGKYGVNVLTAVEVE CCEEEEECCCCCCEEEECCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA