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The map label for this gene is 29348348

Identifier: 29348348

GI number: 29348348

Start: 3696762

End: 3697673

Strand: Reverse

Name: 29348348

Synonym: BT_2939

Alternate gene names: NA

Gene position: 3697673-3696762 (Counterclockwise)

Preceding gene: 29348352

Following gene: 29348339

Centisome position: 59.06

GC content: 46.16

Gene sequence:

>912_bases
ATGGAAAAAGAGAACATTATGACAGTAGATATAGAAGACTTTAAGAAGAGTCAGCATATCCTTGATTATATAGACGATGA
CTTTGCGATAGTCAACAGTCTGGACGGGATTCCGTATAGTAATGATACAGTCCGGCTGAACTGTTTCCTTATTGCTGTCT
GTGCAGAAGGGTGTATCCAGCTGGATATCAACTACCGGACGTATCAGTTGCAGGCGGGCGACTTGCTGCTCGGTCTTCCC
AATACACTGATCAGTCGTACGATGCTGAGTCCTAAATATAAGATAAGGCTGGCGGGATTCTCTACCCGTTTTCTGCAACG
CATTATTAAAATGGAGAAGAAAACGTGGAATACCGCTGCTCATATCCACAACAATCCGGTGAAGTCTATCAGCGAAGGCG
GGGATGATCCTGTTTTCAGGTTTTATCGGGATTTGATTGTGGCGAAGATCAATGATGAACCTCATTATTATCACAGGGAA
GTGATGCAGCATCTCTTCTCCGCCCTTTTTTGTGAGATGCTGGGACAGCTTCACAAGGAAATCGATGCTCCCGACAAGGG
GGACAGTCCGAAAGAAGGCATCAAACAGGCGGATTATACCCTGCGGAAATTCGTGGAGCTATTATCGAAAGACAAGGGTA
TGCACCGTTCTGTGAGTTATTATGCGGATGCGCTCTGCTACACTCCGAAGCATTTTTCGAAAGTCATCAAGCAAGCGTGT
GGCAGGACTCCGCTGGACTTGATCAATGAAACGACGATAGAACATATCAAGTACCGGCTGAAACGTTCGGACAAGTCCGT
CAAGGAAATAGCGGAAGAGTTCAACTTCCCCAACCAGTCCTTTTTCGGGAAGTACGTAAAGATGCATTTGGGGACTTCAC
CGGCTAATTACCGGAATCGCGAAGATGAGTGA

Upstream 100 bases:

>100_bases
TTTGCGTATAAACGATATATCAAACAATTATAAAGGAGTTTGGGACATTCTGTTTTCCCTATTATTTACCAACTTTGCAA
AAAGTAAAAAAGGAGAGATT

Downstream 100 bases:

>100_bases
GACGAAGAATCTCTTGAAAAGCCTTCAGGTAGCGTTCGCTGACCGTCTCCATATTGATCTTTTCCCGGATCATCCGTTCC
GATTCTTTTCCCATCTCCTT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; AraC-Type Transcription Regulator; Transcriptional Regulator AraC Family; Helix-Turn-Helix Domain-Containing Protein; Transcription Regulator; AraC/XylS Family Transcriptional Regulator; AraC-Family Regulatory Protein; Transcription Regulator AraC-Type; Helix-Turn-Helix- Domain Containing Protein AraC Type; AraC-Type Transcriptional Regulator; AraC-Family Transcriptional Regulator

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MEKENIMTVDIEDFKKSQHILDYIDDDFAIVNSLDGIPYSNDTVRLNCFLIAVCAEGCIQLDINYRTYQLQAGDLLLGLP
NTLISRTMLSPKYKIRLAGFSTRFLQRIIKMEKKTWNTAAHIHNNPVKSISEGGDDPVFRFYRDLIVAKINDEPHYYHRE
VMQHLFSALFCEMLGQLHKEIDAPDKGDSPKEGIKQADYTLRKFVELLSKDKGMHRSVSYYADALCYTPKHFSKVIKQAC
GRTPLDLINETTIEHIKYRLKRSDKSVKEIAEEFNFPNQSFFGKYVKMHLGTSPANYRNREDE

Sequences:

>Translated_303_residues
MEKENIMTVDIEDFKKSQHILDYIDDDFAIVNSLDGIPYSNDTVRLNCFLIAVCAEGCIQLDINYRTYQLQAGDLLLGLP
NTLISRTMLSPKYKIRLAGFSTRFLQRIIKMEKKTWNTAAHIHNNPVKSISEGGDDPVFRFYRDLIVAKINDEPHYYHRE
VMQHLFSALFCEMLGQLHKEIDAPDKGDSPKEGIKQADYTLRKFVELLSKDKGMHRSVSYYADALCYTPKHFSKVIKQAC
GRTPLDLINETTIEHIKYRLKRSDKSVKEIAEEFNFPNQSFFGKYVKMHLGTSPANYRNREDE
>Mature_303_residues
MEKENIMTVDIEDFKKSQHILDYIDDDFAIVNSLDGIPYSNDTVRLNCFLIAVCAEGCIQLDINYRTYQLQAGDLLLGLP
NTLISRTMLSPKYKIRLAGFSTRFLQRIIKMEKKTWNTAAHIHNNPVKSISEGGDDPVFRFYRDLIVAKINDEPHYYHRE
VMQHLFSALFCEMLGQLHKEIDAPDKGDSPKEGIKQADYTLRKFVELLSKDKGMHRSVSYYADALCYTPKHFSKVIKQAC
GRTPLDLINETTIEHIKYRLKRSDKSVKEIAEEFNFPNQSFFGKYVKMHLGTSPANYRNREDE

Specific function: Unknown

COG id: COG4753

COG function: function code T; Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35106; Mature: 35106

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKENIMTVDIEDFKKSQHILDYIDDDFAIVNSLDGIPYSNDTVRLNCFLIAVCAEGCIQ
CCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEHHHHHHHHHCCCEE
LDINYRTYQLQAGDLLLGLPNTLISRTMLSPKYKIRLAGFSTRFLQRIIKMEKKTWNTAA
EEECCEEEEEECCCEEEECCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCHHHH
HIHNNPVKSISEGGDDPVFRFYRDLIVAKINDEPHYYHREVMQHLFSALFCEMLGQLHKE
HHCCCCHHHHHCCCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IDAPDKGDSPKEGIKQADYTLRKFVELLSKDKGMHRSVSYYADALCYTPKHFSKVIKQAC
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
GRTPLDLINETTIEHIKYRLKRSDKSVKEIAEEFNFPNQSFFGKYVKMHLGTSPANYRNR
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC
EDE
CCC
>Mature Secondary Structure
MEKENIMTVDIEDFKKSQHILDYIDDDFAIVNSLDGIPYSNDTVRLNCFLIAVCAEGCIQ
CCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEHHHHHHHHHCCCEE
LDINYRTYQLQAGDLLLGLPNTLISRTMLSPKYKIRLAGFSTRFLQRIIKMEKKTWNTAA
EEECCEEEEEECCCEEEECCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCHHHH
HIHNNPVKSISEGGDDPVFRFYRDLIVAKINDEPHYYHREVMQHLFSALFCEMLGQLHKE
HHCCCCHHHHHCCCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IDAPDKGDSPKEGIKQADYTLRKFVELLSKDKGMHRSVSYYADALCYTPKHFSKVIKQAC
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
GRTPLDLINETTIEHIKYRLKRSDKSVKEIAEEFNFPNQSFFGKYVKMHLGTSPANYRNR
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC
EDE
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA