| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29348328
Identifier: 29348328
GI number: 29348328
Start: 3660858
End: 3662780
Strand: Reverse
Name: 29348328
Synonym: BT_2919
Alternate gene names: NA
Gene position: 3662780-3660858 (Counterclockwise)
Preceding gene: 29348329
Following gene: 29348327
Centisome position: 58.51
GC content: 38.38
Gene sequence:
>1923_bases ATGAAAAAATTACAATTATTAATATTGAATTGTTTGATTATCGTTTTATCCTCCTGTGATTCATTTCTGGATATCGTTCC GGATGATATCGCCACAATCGATAATGCATTTACAATGAGAGCGCAAGCAGAGAAATATCTGTTTACCTGTTATTACTATC TTCCAGCTCATGGACTATTGGAGGCAAATCCTGCGATTGCCGGTGGTGATGAATTGTATATTACGGAGTCTTTCCGTAGT GCAGCACACGTGCATGCCTGGTATATTTCACATAATATGCAAAGTTCGGCAAGACCGCGTTGTGATTACTGGACGGGAGC CGATCAGCAAAACAACAAGTCTTTATATCAGGGAATCAGTGACTGTAATATTTTTTTAGAGAATATCCAGAAGGTGCCTG ATATGACACAGGCTGAAAAGGATCGTTGGGCGGCTGAAGTGCGTTTTCTGAAAGCCTATTATCATTATTGGTTGATCAGG ATGTATGGTCCGATTCCTATTATGGACCAGAATATTCCGGTGAATGCTGGTGAAGAAGAGGTAAAGGTCTTTAGAAATAC AATAGATGAATGTTTTGATTATGTGATTAACACATTGACTGAAATTATCGACAGCAACCATTTACCAGATAAGATAATGA ATGAGGCGGAAGAACTGGGACGAATTACTCAAGGAATTGCAATGGCTATAAGAGCAGAGGTGATGGTAACTGCTGCCAGT CCTTTATTTAATGGAAACGCGGATTATAAAGGATATACCGATTCAAGGGGCATTGAGATCTTTAATCCTAACAAATCGGA ACAAGATAAGAAGCAACGTTGGATAGATGCAGCAGAAGCATGTAAACAAGCTATTGAATTTTTAAAGGCTCAGGGACATG ATTTATATAAATATACTTCTCTTGAGTACACTATATCTGATCAGACACGGGCAAAAATGAATATCCGTAATATTGTAACA GAGAAATGGAATCAGGAAATTATCTGGGCTAATTCAAATAGTATTATCGGTCAATTGCAGGATCATGCGATTCCACGCGG TTTGGAACCAGGAAAAGAAGGGAATGCAAGTGTTGGTGGTAATCTGGCTGTTCCTCTGAAAATAGCTGATTTATTCTACA CAAAAAATGGAGTACCTATCACGGAAGATAAAACCTGGAACTATGATGATCGCTTAGAATTGAGAAAGGCAACATCTGAT GATAAATACTTTATAAAAGAAGGATATACAACAGCCAGTATCAATTTTGACAGAGAAGTTCGCTACTATGCAAGTTTAGG ATTTGACGGTGCAGTTTGGTTCGGTCAGGGTGTAACGGATGAAACGAAGCCGATTTATGTACAATGTAAGCAAGGACAGT CTGCTGCTAATCAGATATCAAACTCATGGAATGAAACTGGTATATGGCCTAAAAAACTAGTTCACTTTAAAAGTGTTGTA GGACAGACTAGTGGGTTTACCAAGATTACTTATCCATTCCCAGTGATGAGATTAGGAAACTTATACTTGTTGTATGCCGA GGCTTTGAATGAGAGTGGTGCTTCTAAAACAGATGTTCTGACCTGGGTCGACTTGATCAGAGAAAGAGCAGGTTTGGAAG GAGTAGAAGAGAGTTGGGATACATACACGAATAACAAGAAATATGAAACAGTAGACGGCAGACGTGAGATTATCCAGCAA GAACGGGGTATTGAGTTAGCCTTTGAAGCTCAGAGGTTCTGGGATTTGCGTCGATGGAAGTTGGCATATCAGGAACAAAA TAAGCCTATTACAGGATGGAATACTCAATATAGTACAAATGAGGATTACTATACAGAACAATTGATTTATGCTCAAGAAT TCAGAATAAGAAACTATTTCTGGCCGATATTAGATAAAGAATTATATTCGAATAAAAATCTGGTACAGAATTATGGGTGG TAA
Upstream 100 bases:
>100_bases TAAACTTTGGGATCCTGAAATGGCAGGTGCCGGTTTAGGTTACCCTGTGCAGAGAGTATATAATGTTGGACTAAATTTAA CATTCTAAATCTGATATAAA
Downstream 100 bases:
>100_bases ACTTTAAATTTAAGACGTTATGAAGAAGAAATTATATAAATATGGTTTGCTTTATATAGGAGTGGCTTTAGCTGCTTGTG CTGATAATGCTGATTTGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MKKLQLLILNCLIIVLSSCDSFLDIVPDDIATIDNAFTMRAQAEKYLFTCYYYLPAHGLLEANPAIAGGDELYITESFRS AAHVHAWYISHNMQSSARPRCDYWTGADQQNNKSLYQGISDCNIFLENIQKVPDMTQAEKDRWAAEVRFLKAYYHYWLIR MYGPIPIMDQNIPVNAGEEEVKVFRNTIDECFDYVINTLTEIIDSNHLPDKIMNEAEELGRITQGIAMAIRAEVMVTAAS PLFNGNADYKGYTDSRGIEIFNPNKSEQDKKQRWIDAAEACKQAIEFLKAQGHDLYKYTSLEYTISDQTRAKMNIRNIVT EKWNQEIIWANSNSIIGQLQDHAIPRGLEPGKEGNASVGGNLAVPLKIADLFYTKNGVPITEDKTWNYDDRLELRKATSD DKYFIKEGYTTASINFDREVRYYASLGFDGAVWFGQGVTDETKPIYVQCKQGQSAANQISNSWNETGIWPKKLVHFKSVV GQTSGFTKITYPFPVMRLGNLYLLYAEALNESGASKTDVLTWVDLIRERAGLEGVEESWDTYTNNKKYETVDGRREIIQQ ERGIELAFEAQRFWDLRRWKLAYQEQNKPITGWNTQYSTNEDYYTEQLIYAQEFRIRNYFWPILDKELYSNKNLVQNYGW
Sequences:
>Translated_640_residues MKKLQLLILNCLIIVLSSCDSFLDIVPDDIATIDNAFTMRAQAEKYLFTCYYYLPAHGLLEANPAIAGGDELYITESFRS AAHVHAWYISHNMQSSARPRCDYWTGADQQNNKSLYQGISDCNIFLENIQKVPDMTQAEKDRWAAEVRFLKAYYHYWLIR MYGPIPIMDQNIPVNAGEEEVKVFRNTIDECFDYVINTLTEIIDSNHLPDKIMNEAEELGRITQGIAMAIRAEVMVTAAS PLFNGNADYKGYTDSRGIEIFNPNKSEQDKKQRWIDAAEACKQAIEFLKAQGHDLYKYTSLEYTISDQTRAKMNIRNIVT EKWNQEIIWANSNSIIGQLQDHAIPRGLEPGKEGNASVGGNLAVPLKIADLFYTKNGVPITEDKTWNYDDRLELRKATSD DKYFIKEGYTTASINFDREVRYYASLGFDGAVWFGQGVTDETKPIYVQCKQGQSAANQISNSWNETGIWPKKLVHFKSVV GQTSGFTKITYPFPVMRLGNLYLLYAEALNESGASKTDVLTWVDLIRERAGLEGVEESWDTYTNNKKYETVDGRREIIQQ ERGIELAFEAQRFWDLRRWKLAYQEQNKPITGWNTQYSTNEDYYTEQLIYAQEFRIRNYFWPILDKELYSNKNLVQNYGW >Mature_640_residues MKKLQLLILNCLIIVLSSCDSFLDIVPDDIATIDNAFTMRAQAEKYLFTCYYYLPAHGLLEANPAIAGGDELYITESFRS AAHVHAWYISHNMQSSARPRCDYWTGADQQNNKSLYQGISDCNIFLENIQKVPDMTQAEKDRWAAEVRFLKAYYHYWLIR MYGPIPIMDQNIPVNAGEEEVKVFRNTIDECFDYVINTLTEIIDSNHLPDKIMNEAEELGRITQGIAMAIRAEVMVTAAS PLFNGNADYKGYTDSRGIEIFNPNKSEQDKKQRWIDAAEACKQAIEFLKAQGHDLYKYTSLEYTISDQTRAKMNIRNIVT EKWNQEIIWANSNSIIGQLQDHAIPRGLEPGKEGNASVGGNLAVPLKIADLFYTKNGVPITEDKTWNYDDRLELRKATSD DKYFIKEGYTTASINFDREVRYYASLGFDGAVWFGQGVTDETKPIYVQCKQGQSAANQISNSWNETGIWPKKLVHFKSVV GQTSGFTKITYPFPVMRLGNLYLLYAEALNESGASKTDVLTWVDLIRERAGLEGVEESWDTYTNNKKYETVDGRREIIQQ ERGIELAFEAQRFWDLRRWKLAYQEQNKPITGWNTQYSTNEDYYTEQLIYAQEFRIRNYFWPILDKELYSNKNLVQNYGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73803; Mature: 73803
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLQLLILNCLIIVLSSCDSFLDIVPDDIATIDNAFTMRAQAEKYLFTCYYYLPAHGLL CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHEEHHHHCCEEEEEEEECCCCCCE EANPAIAGGDELYITESFRSAAHVHAWYISHNMQSSARPRCDYWTGADQQNNKSLYQGIS ECCCCCCCCCEEEEEHHHHCCHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCHH DCNIFLENIQKVPDMTQAEKDRWAAEVRFLKAYYHYWLIRMYGPIPIMDQNIPVNAGEEE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHH VKVFRNTIDECFDYVINTLTEIIDSNHLPDKIMNEAEELGRITQGIAMAIRAEVMVTAAS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC PLFNGNADYKGYTDSRGIEIFNPNKSEQDKKQRWIDAAEACKQAIEFLKAQGHDLYKYTS CCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE LEYTISDQTRAKMNIRNIVTEKWNQEIIWANSNSIIGQLQDHAIPRGLEPGKEGNASVGG EEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCC NLAVPLKIADLFYTKNGVPITEDKTWNYDDRLELRKATSDDKYFIKEGYTTASINFDREV CEEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCEEEEECCCCCE RYYASLGFDGAVWFGQGVTDETKPIYVQCKQGQSAANQISNSWNETGIWPKKLVHFKSVV EEEEECCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH GQTSGFTKITYPFPVMRLGNLYLLYAEALNESGASKTDVLTWVDLIRERAGLEGVEESWD CCCCCCEEEECCCCHHHHCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH TYTNNKKYETVDGRREIIQQERGIELAFEAQRFWDLRRWKLAYQEQNKPITGWNTQYSTN HHCCCCEEECCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC EDYYTEQLIYAQEFRIRNYFWPILDKELYSNKNLVQNYGW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC >Mature Secondary Structure MKKLQLLILNCLIIVLSSCDSFLDIVPDDIATIDNAFTMRAQAEKYLFTCYYYLPAHGLL CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHEEHHHHCCEEEEEEEECCCCCCE EANPAIAGGDELYITESFRSAAHVHAWYISHNMQSSARPRCDYWTGADQQNNKSLYQGIS ECCCCCCCCCEEEEEHHHHCCHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCHH DCNIFLENIQKVPDMTQAEKDRWAAEVRFLKAYYHYWLIRMYGPIPIMDQNIPVNAGEEE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHH VKVFRNTIDECFDYVINTLTEIIDSNHLPDKIMNEAEELGRITQGIAMAIRAEVMVTAAS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC PLFNGNADYKGYTDSRGIEIFNPNKSEQDKKQRWIDAAEACKQAIEFLKAQGHDLYKYTS CCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE LEYTISDQTRAKMNIRNIVTEKWNQEIIWANSNSIIGQLQDHAIPRGLEPGKEGNASVGG EEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCC NLAVPLKIADLFYTKNGVPITEDKTWNYDDRLELRKATSDDKYFIKEGYTTASINFDREV CEEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECCCEEEEECCCCCE RYYASLGFDGAVWFGQGVTDETKPIYVQCKQGQSAANQISNSWNETGIWPKKLVHFKSVV EEEEECCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH GQTSGFTKITYPFPVMRLGNLYLLYAEALNESGASKTDVLTWVDLIRERAGLEGVEESWD CCCCCCEEEECCCCHHHHCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH TYTNNKKYETVDGRREIIQQERGIELAFEAQRFWDLRRWKLAYQEQNKPITGWNTQYSTN HHCCCCEEECCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC EDYYTEQLIYAQEFRIRNYFWPILDKELYSNKNLVQNYGW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA