| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348326
Identifier: 29348326
GI number: 29348326
Start: 3658925
End: 3659599
Strand: Reverse
Name: 29348326
Synonym: BT_2917
Alternate gene names: NA
Gene position: 3659599-3658925 (Counterclockwise)
Preceding gene: 29348327
Following gene: 29348325
Centisome position: 58.46
GC content: 36.74
Gene sequence:
>675_bases ATGAGACTATTTAAGAATTTTGCTCTTGTATTTTTATTTATAGGTACTTTGGCGTCTTGTGATGGCATGGATGCAACATA TAAAGAGTTTATTGAAGAAGGACCTATTGTTTATATAGGAAAAGTGGATTCGTTGAAAGCGTATGCCGGACGTAACCGAG CTATGCTTGAGTGGCAGAAGTTGCTTGATCCACGTGCTAAAACAGCTAAAATCTTCTGGGAAAACAGAACGAGGTCCACT GAATTACAATTAACTGATAAGGCTGGTCTAACACAGGTTATAGTGAAGGATTTGGCGGAAGGTTCGTATGTATTTGAAGT TTGCACATATGATACTCATGGTAATTCTTCTATTATGTCAGAAGTTCCTTGTACTGTATATGGTGATGTTTATGAGAAGT TGTTGTTTAATACAAAAGTAAAGACGGCAGTTTTAAAAAACGATGTGTTGACCATTACTTTTGCAGCTTCGCTTGAACCG ACTTTCTTTGGTTCCGAAATTACTTATACGAGCATTGATGGAGGGGATAAAACGGTGATTCTGAAAGCACCCGAGACGCA GATTAAGATAGATGATTTTGCAGGCGATCGTATTATTTATCGTTCTGTTTATTTGCCGGAAGAAACTGCTATCGATTATT TCTATAGTGAATCGGATGAATTTGAAATTAAATAA
Upstream 100 bases:
>100_bases GACGAATAACACTTGGGGAAATACACGCTACATGCATCTTCACGAACTAACATTCTTCGGTGCAAAGCATAATTAGTAAT AAGTAAAAAGAAATAATGCT
Downstream 100 bases:
>100_bases AGAGGATAGAAAGAATGCGTAAAGTAGTAATATTATTATATTTGGTCCAGTTATTGTTTACCGGTTTTGCTCAGGCAAAA CCGGGCAAGGACCGTGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MRLFKNFALVFLFIGTLASCDGMDATYKEFIEEGPIVYIGKVDSLKAYAGRNRAMLEWQKLLDPRAKTAKIFWENRTRST ELQLTDKAGLTQVIVKDLAEGSYVFEVCTYDTHGNSSIMSEVPCTVYGDVYEKLLFNTKVKTAVLKNDVLTITFAASLEP TFFGSEITYTSIDGGDKTVILKAPETQIKIDDFAGDRIIYRSVYLPEETAIDYFYSESDEFEIK
Sequences:
>Translated_224_residues MRLFKNFALVFLFIGTLASCDGMDATYKEFIEEGPIVYIGKVDSLKAYAGRNRAMLEWQKLLDPRAKTAKIFWENRTRST ELQLTDKAGLTQVIVKDLAEGSYVFEVCTYDTHGNSSIMSEVPCTVYGDVYEKLLFNTKVKTAVLKNDVLTITFAASLEP TFFGSEITYTSIDGGDKTVILKAPETQIKIDDFAGDRIIYRSVYLPEETAIDYFYSESDEFEIK >Mature_224_residues MRLFKNFALVFLFIGTLASCDGMDATYKEFIEEGPIVYIGKVDSLKAYAGRNRAMLEWQKLLDPRAKTAKIFWENRTRST ELQLTDKAGLTQVIVKDLAEGSYVFEVCTYDTHGNSSIMSEVPCTVYGDVYEKLLFNTKVKTAVLKNDVLTITFAASLEP TFFGSEITYTSIDGGDKTVILKAPETQIKIDDFAGDRIIYRSVYLPEETAIDYFYSESDEFEIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25348; Mature: 25348
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFKNFALVFLFIGTLASCDGMDATYKEFIEEGPIVYIGKVDSLKAYAGRNRAMLEWQK CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCHHHCCCCCHHHHHHH LLDPRAKTAKIFWENRTRSTELQLTDKAGLTQVIVKDLAEGSYVFEVCTYDTHGNSSIMS HCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCHHH EVPCTVYGDVYEKLLFNTKVKTAVLKNDVLTITFAASLEPTFFGSEITYTSIDGGDKTVI CCCCEEEHHHHHHHHHCCCHHEEEECCCEEEEEEECCCCCEECCCEEEEEEECCCCEEEE LKAPETQIKIDDFAGDRIIYRSVYLPEETAIDYFYSESDEFEIK EECCCCEEEEECCCCCEEEEEEEECCCHHHEEEEECCCCCEEEC >Mature Secondary Structure MRLFKNFALVFLFIGTLASCDGMDATYKEFIEEGPIVYIGKVDSLKAYAGRNRAMLEWQK CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCHHHCCCCCHHHHHHH LLDPRAKTAKIFWENRTRSTELQLTDKAGLTQVIVKDLAEGSYVFEVCTYDTHGNSSIMS HCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCHHH EVPCTVYGDVYEKLLFNTKVKTAVLKNDVLTITFAASLEPTFFGSEITYTSIDGGDKTVI CCCCEEEHHHHHHHHHCCCHHEEEECCCEEEEEEECCCCCEECCCEEEEEEECCCCEEEE LKAPETQIKIDDFAGDRIIYRSVYLPEETAIDYFYSESDEFEIK EECCCCEEEEECCCCCEEEEEEEECCCHHHEEEEECCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA