| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is yvnB [H]
Identifier: 29348324
GI number: 29348324
Start: 3656629
End: 3657603
Strand: Reverse
Name: yvnB [H]
Synonym: BT_2915
Alternate gene names: 29348324
Gene position: 3657603-3656629 (Counterclockwise)
Preceding gene: 29348325
Following gene: 29348323
Centisome position: 58.42
GC content: 38.77
Gene sequence:
>975_bases ATGAAAAATCAAATGAAATGGATAGCTTTATTGACTACGGCAGTTTTTATTTTCTCGGGTTGTAAAACACAAAAACAGGT CAGACTGGTTTTGTTGCCGGATATACAAACTTATTCACGGCTTTATCCCGATATTTTAAAATCGCAAACTCAATGGGCAA TAGATCATGCAGATAGTATTGACTTTGTTTTGCAACAGGGGGACATGACTGATCACAATGTCGATAAGGAGTGGGAGGTT GCAGCTGCCGCTTTGAATACTATGGACAACCAAGTTCCTTATGCTTTTGTAATGGGAAATCACGATTTAGGTAAAAATTC GAATAAAAGAGATTCGGAACTCTTCAATCGATATTTTCCTTATGATAAATACAGTAAGACGAGAAATTTCGGTGGTGCAT TTGAAGAAGGGAAAATGGATAATGTGTGGTATACTTTCAAGGCTGCCGGATTGAAATGGCTGATTCTTTGTTTGGAATTT GGACCTCGTACTAGTGTGCTTGACTGGGCAGGTGAGATTGTGAAGAAACATCCGCATCATAAGGTGATTATCAATACGCA TGCATATATGTACTCGGATGATACACGTATGGGAGAAGGCGATCGTTGGCTGCCGCAGAAATACGGTTTAGGCAAAGATA CCGGTGAAAATGCGGTGAATAACGGTGAGCAAATGTGGGATAAGTTGGTTAGTAAATATCCTAATATTCTTTTTGTATTC AGTGGGCATGTACTGAATAGCGGTGTTGGGACCTTAGTCAGTATAGGTGATCATGGTAATAAAGTGTTTCAGATGTTAGC CAATTTTCAAGATGGAGTGAAAGGGACGAACAGAGGGCAAACCGGTTTCTTGCGTATTGTGGATATAGACGTGAAGAAAC AGCAAGTCAGAGTAAAAACTTATTCTCCCTATCTGAAGGAATATAAGAATGATGTTAAAAATAAATTCTCTTTCGAAGGG GTAAACTTTAAATGA
Upstream 100 bases:
>100_bases GTTCTATTAAAAACTAGGATTAAATCTTAGGGAAGTATTGAAAAGAAAGTAGATGTAACTAAATAAACTTCTGAGAAAGT TGAATAAAGAGTAGAAACAG
Downstream 100 bases:
>100_bases TATAGTTTTAGTATTCTGGAGGATGTGGCTATGAAATACACTCAATCTTTTTGTTTTGTAAGTGTGATTGTTTTGTCGTC TTCTGTTCATCTCCATGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKNQMKWIALLTTAVFIFSGCKTQKQVRLVLLPDIQTYSRLYPDILKSQTQWAIDHADSIDFVLQQGDMTDHNVDKEWEV AAAALNTMDNQVPYAFVMGNHDLGKNSNKRDSELFNRYFPYDKYSKTRNFGGAFEEGKMDNVWYTFKAAGLKWLILCLEF GPRTSVLDWAGEIVKKHPHHKVIINTHAYMYSDDTRMGEGDRWLPQKYGLGKDTGENAVNNGEQMWDKLVSKYPNILFVF SGHVLNSGVGTLVSIGDHGNKVFQMLANFQDGVKGTNRGQTGFLRIVDIDVKKQQVRVKTYSPYLKEYKNDVKNKFSFEG VNFK
Sequences:
>Translated_324_residues MKNQMKWIALLTTAVFIFSGCKTQKQVRLVLLPDIQTYSRLYPDILKSQTQWAIDHADSIDFVLQQGDMTDHNVDKEWEV AAAALNTMDNQVPYAFVMGNHDLGKNSNKRDSELFNRYFPYDKYSKTRNFGGAFEEGKMDNVWYTFKAAGLKWLILCLEF GPRTSVLDWAGEIVKKHPHHKVIINTHAYMYSDDTRMGEGDRWLPQKYGLGKDTGENAVNNGEQMWDKLVSKYPNILFVF SGHVLNSGVGTLVSIGDHGNKVFQMLANFQDGVKGTNRGQTGFLRIVDIDVKKQQVRVKTYSPYLKEYKNDVKNKFSFEG VNFK >Mature_324_residues MKNQMKWIALLTTAVFIFSGCKTQKQVRLVLLPDIQTYSRLYPDILKSQTQWAIDHADSIDFVLQQGDMTDHNVDKEWEV AAAALNTMDNQVPYAFVMGNHDLGKNSNKRDSELFNRYFPYDKYSKTRNFGGAFEEGKMDNVWYTFKAAGLKWLILCLEF GPRTSVLDWAGEIVKKHPHHKVIINTHAYMYSDDTRMGEGDRWLPQKYGLGKDTGENAVNNGEQMWDKLVSKYPNILFVF SGHVLNSGVGTLVSIGDHGNKVFQMLANFQDGVKGTNRGQTGFLRIVDIDVKKQQVRVKTYSPYLKEYKNDVKNKFSFEG VNFK
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR011401 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 37140; Mature: 37140
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNQMKWIALLTTAVFIFSGCKTQKQVRLVLLPDIQTYSRLYPDILKSQTQWAIDHADSI CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCHHEECCCCCCC DFVLQQGDMTDHNVDKEWEVAAAALNTMDNQVPYAFVMGNHDLGKNSNKRDSELFNRYFP EEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCC YDKYSKTRNFGGAFEEGKMDNVWYTFKAAGLKWLILCLEFGPRTSVLDWAGEIVKKHPHH CCHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEHHCCCCCCHHHHHHHHHHCCCCC KVIINTHAYMYSDDTRMGEGDRWLPQKYGLGKDTGENAVNNGEQMWDKLVSKYPNILFVF EEEEECCEEEEECCCCCCCCCCCCHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCEEEEE SGHVLNSGVGTLVSIGDHGNKVFQMLANFQDGVKGTNRGQTGFLRIVDIDVKKQQVRVKT ECCCHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEC YSPYLKEYKNDVKNKFSFEGVNFK CCHHHHHHHHHHHHCEECCCCCCC >Mature Secondary Structure MKNQMKWIALLTTAVFIFSGCKTQKQVRLVLLPDIQTYSRLYPDILKSQTQWAIDHADSI CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCHHEECCCCCCC DFVLQQGDMTDHNVDKEWEVAAAALNTMDNQVPYAFVMGNHDLGKNSNKRDSELFNRYFP EEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCC YDKYSKTRNFGGAFEEGKMDNVWYTFKAAGLKWLILCLEFGPRTSVLDWAGEIVKKHPHH CCHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEHHCCCCCCHHHHHHHHHHCCCCC KVIINTHAYMYSDDTRMGEGDRWLPQKYGLGKDTGENAVNNGEQMWDKLVSKYPNILFVF EEEEECCEEEEECCCCCCCCCCCCHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCEEEEE SGHVLNSGVGTLVSIGDHGNKVFQMLANFQDGVKGTNRGQTGFLRIVDIDVKKQQVRVKT ECCCHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEC YSPYLKEYKNDVKNKFSFEGVNFK CCHHHHHHHHHHHHCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]