| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is ugl [H]
Identifier: 29348322
GI number: 29348322
Start: 3653945
End: 3655153
Strand: Reverse
Name: ugl [H]
Synonym: BT_2913
Alternate gene names: 29348322
Gene position: 3655153-3653945 (Counterclockwise)
Preceding gene: 29348323
Following gene: 29348321
Centisome position: 58.39
GC content: 38.96
Gene sequence:
>1209_bases ATGAAAGTAAGTTCATCTATCATTGCATCTCTTTTGCTTTTGACAGTTTGTAGTTGTTCAACTCCGAAAAGCGAAATGAG TACTCTCGTGAATAACAGTTTACAAACGGCAACTGTACAGTCAAAGCTTATGGCTGAGGATTTATTGAATGAAGAAGGAA AACTACCTCGTACAATCGGCAAGGATGGTAAGTTGATGACATCAAAATCCAATTGGTGGACAAGTGGCTTTTTTCCCGGT GTATTATGGTATCTGTACGAGGTGAATGGCAATGATTCTTTGAAAATGTATGCTGAGAACTATACAAAACGGATAGAAAA CCAGAAATATACTACTGATAATCATGATGTGGGATTTATGTTGTATTGTAGCTTTGGTAATGGATTACGCTTGACAGGTA ATGATGATTATAGAAAGACATTATTGCAGGGGTCTGAATCGTTGAGTACCCGTTTTCGTCCACAGGTGGGTTGCATTCGT TCTTGGGACTGGAATCAGAAGGTGTGGGAGTATCCGGTAATTATTGATAATTTGATGAATCTGGAGATGTTAATGTGGGC TTCCAAGAACTCTGATGATCCTAAATTTGAGGAAATAGCTAAGTCACATGCGGATGTGACGATGAAATATCATTTCCGAT CAGATTATAGCTCATATCATGTAATTTCTTATGATACTATTTCCGGTTTACCGGAAAAGAAGAATACTTGTCAGGGATAT GCACATGAGTCATGTTGGGCGCGTGGGCAAGGTTGGGCATTGTATGGCTATACTATGATGTATCGTGAAACAGGGCAGGA GAAGTATTTGCGGCATGCCATCAATGTTGCTAAATTCATAATAAATCATCCCCGTTTGCCTGAAGATAAGATTCCATATT GGGATTTTGATGCTCCTAATATACCTAATGAACTTCGCGATGCCTCTGCTGGTGCATTGATGGCTTCTGCTTTTATTGAA CTCAGTCTGTATACAGAAGGGGATTTTTCGAAGCAATGTCTCTCTGTTGCAGAAACACAGTTGAAAACCCTTTCTTCGCC GGAATATTTGGCGGAGCCTGGCACAAATTGCAATTTTATCCTAAAGCATTCTGTAGGTAATAATCCAGGTAAGGCAGAAG TTGATGTACCATTAACCTATGCCGATTATTATTATGTTGAGGCTTTAGTGCGCTATAAAAGAGATATTTTAAAAGAAAAG CTGAATTGA
Upstream 100 bases:
>100_bases AGGTGCATTGCCCATATTTGAGTAGAGAAAGAGATAAACTTGAGGCTCAGATTAAGATCCGGAAATCTCAATTATAGAAA TAATTTAAAAGAATATATAA
Downstream 100 bases:
>100_bases AAATCTTATTTTAAATGATACAAAGATTATCTTTTTGGATAATAATGATTATCTGTTCGACGATGGTCTATGGACAAGAA CATGATGGTGATTATACAAA
Product: unsaturated glucuronylhydrolase
Products: NA
Alternate protein names: UGL; Glycosaminoglycan hydrolase; Glycuronidase; Unsaturated uronic acid hydrolase [H]
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MKVSSSIIASLLLLTVCSCSTPKSEMSTLVNNSLQTATVQSKLMAEDLLNEEGKLPRTIGKDGKLMTSKSNWWTSGFFPG VLWYLYEVNGNDSLKMYAENYTKRIENQKYTTDNHDVGFMLYCSFGNGLRLTGNDDYRKTLLQGSESLSTRFRPQVGCIR SWDWNQKVWEYPVIIDNLMNLEMLMWASKNSDDPKFEEIAKSHADVTMKYHFRSDYSSYHVISYDTISGLPEKKNTCQGY AHESCWARGQGWALYGYTMMYRETGQEKYLRHAINVAKFIINHPRLPEDKIPYWDFDAPNIPNELRDASAGALMASAFIE LSLYTEGDFSKQCLSVAETQLKTLSSPEYLAEPGTNCNFILKHSVGNNPGKAEVDVPLTYADYYYVEALVRYKRDILKEK LN
Sequences:
>Translated_402_residues MKVSSSIIASLLLLTVCSCSTPKSEMSTLVNNSLQTATVQSKLMAEDLLNEEGKLPRTIGKDGKLMTSKSNWWTSGFFPG VLWYLYEVNGNDSLKMYAENYTKRIENQKYTTDNHDVGFMLYCSFGNGLRLTGNDDYRKTLLQGSESLSTRFRPQVGCIR SWDWNQKVWEYPVIIDNLMNLEMLMWASKNSDDPKFEEIAKSHADVTMKYHFRSDYSSYHVISYDTISGLPEKKNTCQGY AHESCWARGQGWALYGYTMMYRETGQEKYLRHAINVAKFIINHPRLPEDKIPYWDFDAPNIPNELRDASAGALMASAFIE LSLYTEGDFSKQCLSVAETQLKTLSSPEYLAEPGTNCNFILKHSVGNNPGKAEVDVPLTYADYYYVEALVRYKRDILKEK LN >Mature_402_residues MKVSSSIIASLLLLTVCSCSTPKSEMSTLVNNSLQTATVQSKLMAEDLLNEEGKLPRTIGKDGKLMTSKSNWWTSGFFPG VLWYLYEVNGNDSLKMYAENYTKRIENQKYTTDNHDVGFMLYCSFGNGLRLTGNDDYRKTLLQGSESLSTRFRPQVGCIR SWDWNQKVWEYPVIIDNLMNLEMLMWASKNSDDPKFEEIAKSHADVTMKYHFRSDYSSYHVISYDTISGLPEKKNTCQGY AHESCWARGQGWALYGYTMMYRETGQEKYLRHAINVAKFIINHPRLPEDKIPYWDFDAPNIPNELRDASAGALMASAFIE LSLYTEGDFSKQCLSVAETQLKTLSSPEYLAEPGTNCNFILKHSVGNNPGKAEVDVPLTYADYYYVEALVRYKRDILKEK LN
Specific function: Catalyzes the hydrolysis of oligosaccharides with unsaturated glucuronyl residues at the non-reducing terminal, to a sugar or an amino sugar, and an unsaturated D-glucuronic acid (GlcA), which is nonenzymatically converted immediately to alpha- keto acid
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 88 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010905 [H]
Pfam domain/function: PF07470 Glyco_hydro_88 [H]
EC number: NA
Molecular weight: Translated: 45945; Mature: 45945
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSSSIIASLLLLTVCSCSTPKSEMSTLVNNSLQTATVQSKLMAEDLLNEEGKLPRTIG CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHCC KDGKLMTSKSNWWTSGFFPGVLWYLYEVNGNDSLKMYAENYTKRIENQKYTTDNHDVGFM CCCCEEECCCCCCCCCCHHCEEEEEEEECCCCCEEEHHHHHHHHHCCCCCCCCCCCEEEE LYCSFGNGLRLTGNDDYRKTLLQGSESLSTRFRPQVGCIRSWDWNQKVWEYPVIIDNLMN EEEECCCCEEECCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCEECCHHHHHHHC LEMLMWASKNSDDPKFEEIAKSHADVTMKYHFRSDYSSYHVISYDTISGLPEKKNTCQGY CEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEHHHCCCCCCCCHHCCC AHESCWARGQGWALYGYTMMYRETGQEKYLRHAINVAKFIINHPRLPEDKIPYWDFDAPN CHHHHHCCCCCEEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCC IPNELRDASAGALMASAFIELSLYTEGDFSKQCLSVAETQLKTLSSPEYLAEPGTNCNFI CCHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEE LKHSVGNNPGKAEVDVPLTYADYYYVEALVRYKRDILKEKLN EEECCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVSSSIIASLLLLTVCSCSTPKSEMSTLVNNSLQTATVQSKLMAEDLLNEEGKLPRTIG CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHCC KDGKLMTSKSNWWTSGFFPGVLWYLYEVNGNDSLKMYAENYTKRIENQKYTTDNHDVGFM CCCCEEECCCCCCCCCCHHCEEEEEEEECCCCCEEEHHHHHHHHHCCCCCCCCCCCEEEE LYCSFGNGLRLTGNDDYRKTLLQGSESLSTRFRPQVGCIRSWDWNQKVWEYPVIIDNLMN EEEECCCCEEECCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCEECCHHHHHHHC LEMLMWASKNSDDPKFEEIAKSHADVTMKYHFRSDYSSYHVISYDTISGLPEKKNTCQGY CEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEHHHCCCCCCCCHHCCC AHESCWARGQGWALYGYTMMYRETGQEKYLRHAINVAKFIINHPRLPEDKIPYWDFDAPN CHHHHHCCCCCEEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCC IPNELRDASAGALMASAFIELSLYTEGDFSKQCLSVAETQLKTLSSPEYLAEPGTNCNFI CCHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEE LKHSVGNNPGKAEVDVPLTYADYYYVEALVRYKRDILKEKLN EEECCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10441389 [H]