| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348317
Identifier: 29348317
GI number: 29348317
Start: 3642019
End: 3644565
Strand: Reverse
Name: 29348317
Synonym: BT_2908
Alternate gene names: NA
Gene position: 3644565-3642019 (Counterclockwise)
Preceding gene: 29348318
Following gene: 29348316
Centisome position: 58.22
GC content: 40.48
Gene sequence:
>2547_bases ATGGAAAAGTTGAAGTATTCTCTTTTGTTTATGATTTCGATTCTGGCTATTTCCAATAGATGGGTGTCGGCAAATGACAT CGATGACGAAAGGAACCGTATATACAATAGTTCTTATAGTGGGAAATATAATAATCGAATCGCTTTTCCTATAGGGGGAA TTGGTACAGGTATGTATTGTCTGGAAGGAACAGGCTATATATCTCATATGTCAGTATGGCATCGACCGGAAGTTTTTCAT GAACCGGGAATGTTTGCTGCTCTGTATGTGAAGGGGGTATGTAATGGGGCTAAGGTACTTGAAGGACCTGTATCTGATTG GAGAAAATTTGGAATGCCCAATTACGGAACAGGAGGTAGTATGGGATCAATATTAGGACTTCCCCGTTTTGATACAGTCG AATTTGAAGCACGTTTTCCGTTTGCCAAGGTTTCATTAACAGATAAAGATATTCCCGTTAAGGTAACCATTTTGGGGTGG AGTCCTTTTATTCCGGGTGATCCGGATAATTCCAGTTTACCGGTAGGAGGATTGGAATATAGTTTAGAGAATACTAGTAA AGAGGTTCAGGAAACTATTTTCTCCTACCATGCTCGTAACTTTCTGAGTTGGGGTAAAGGATTGGATGCTATAAAAACGA TGCCTCATGGGTTTATCCTTTCACAGTCAGGTACAGAAACGGAGCCTCATTTGCAGGGTGATTTTGCTATCTTTACGGAT CAGGATTCTTTAAAGATTAATTATTGTTGGTTTCGTGGAGGATGGTTTGATAGTCTTACGATGGTCTGGAACGCTATTGA GGCAGGTTTAATGCCACAATGTCCAGCAATAGAGAAAGGTGCACCAGGAGCTTCTATGTTTGTCCCGGTAACATTGATGC CAGGGGAAAAGAAAACAATCAGGATTTATACGGCATGGTATGTTCCTAACTCGACTTTGAGGCTTGGAGAGGAACCGGAA GACTGGAATGACAATAATGTTGACTCCGCAAGACTAGCTGTAGAAAAGGCAGATAAGGGTAATTATAAACCTTGGTATAG TAGCCGCTTTACAGGAGTAAATGAGGTTATTGATTATTTTCTGTCTCATTATAAGATTTTGCGCAATCAGACAGAAAGGT TCACAGACTCTTTTTATCGTTCTACCTTACCGCCTGAAGTGATTGAAGCTGTTTCTGCTAACTTAAGTATTTTAAAGTCT CCAACGGTGATGCGGCAATATGACGGACGCTTATGGACTTGGGAGGGATGTGCCGATAATTGGGGATCGTGTCATGGCTC ATGTACTCACGTCTGGAATTATGCACAGGCTATTCCACACTTATTTCCTTCTTTGGAACGTTCGTTAAGGCATACAGAAT TTGAAGAAGGGCAAGATTTGAAAGGCCATCAAGTGTTTCGTGTCAATTTACCGATTCGTCCTACCCGGCACAATTTTCAC TCAGCTGCTGACGGGCAATTGGGAGGTATAATGAAAGTATATCGTGAGTGGAGAATTTCAGGTGAAAATGAGTTCCTTAT CTCTATGTATCCAAAAGTAAAAAAGAGTTTGGACTACTGTATCTCAACTTGGGATCCTCGTAGGGTAGGAAGTATTGAAG AACCACACCATAATACTTATGATATTGAGTTCTGGGGGCCGGATGGTATGCATAATAGTTTCTATTATGGAGCTTTATCA GCTTTCATTCGTATGAGTGAGTTTCTCGATAAAGACGTTACTGAATATAAGAAACTATTGAAAAAAGGACGAAAATTTAC TGAAACAGGCTTGTTTAATGGTGAGTATTTTATCCAAAAGATAGAGTGGAGGGGATTGAATGCAAAAGATCCGACTGTTG CACAAAGTTTCCATAGTTCTTATTCTCCCGAAGCGAAAGAAATACTGGAGAAGGAAGGTCCTAAGTATCAGTATGGGAAC GGTTGTCTGTCTGATGGAGTTTTGGGGTCGTGGCTCTCCCGAATGTGTGGGATGGAAGAAACTCTGAATACAGAAAAAGT GAAGAGCCATTTATTATCAGTACATCGATATAATTTTAAGAAAGATCTGACTGATCACGCCAATCCTCAACGTTCCCCTT ACGCTTTAGGCAAAGAAGGAGGCTTATTATTAGGAAGTTGGCCTAAAGGGGGCAAGTTGTCATTACCTTTTGTCTATAGT AATGAAGTCTGGACAGGAATAGAATATCAAGTAGCTTCACATTTGATGCTACAGGGAGAAGTAGAAAAAGGCCTTGAGAT CGTACGTGCCTGTAGGCAACGTTATGATGGAAGCGTCCGTAACCCTTTTAATGAGTATGAGTGTGGACATTGGTACGGAC GAGCGTTATCCAGTTATGGCTTACTTCAAGGATTGACAGGAGTCCGATATGATGCTGTAGATAAAACACTGTATATTAAT TCAAAAATAGGAGACTTTATTAGCTTTATCAGTACGGAGTCTGGATTTGGTAATATAGAACTTCGTTCCGGAAAACCTTT TGTAAAAGTAGTATCCGGTCATATAGAGGTTGACAGATTTGTCGTATCGGGGAAAGTAGTTGAATAA
Upstream 100 bases:
>100_bases TGCGATTGGCATTGGACATAAAGTCTCTGAACTGAAGAAACTGGCATTTCTTCTGGATATTCCAATAATAGTAGTTGAAT AATGCTTTAAAACTCTTTTT
Downstream 100 bases:
>100_bases TCAACAATAAGATAATAACTAAATTTTTAAGTGATAACTAAATACTATAATATTATGGATAGAAGAACTTTTCTTAAATC TGCGAGTATGAAAGGTACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 848; Mature: 848
Protein sequence:
>848_residues MEKLKYSLLFMISILAISNRWVSANDIDDERNRIYNSSYSGKYNNRIAFPIGGIGTGMYCLEGTGYISHMSVWHRPEVFH EPGMFAALYVKGVCNGAKVLEGPVSDWRKFGMPNYGTGGSMGSILGLPRFDTVEFEARFPFAKVSLTDKDIPVKVTILGW SPFIPGDPDNSSLPVGGLEYSLENTSKEVQETIFSYHARNFLSWGKGLDAIKTMPHGFILSQSGTETEPHLQGDFAIFTD QDSLKINYCWFRGGWFDSLTMVWNAIEAGLMPQCPAIEKGAPGASMFVPVTLMPGEKKTIRIYTAWYVPNSTLRLGEEPE DWNDNNVDSARLAVEKADKGNYKPWYSSRFTGVNEVIDYFLSHYKILRNQTERFTDSFYRSTLPPEVIEAVSANLSILKS PTVMRQYDGRLWTWEGCADNWGSCHGSCTHVWNYAQAIPHLFPSLERSLRHTEFEEGQDLKGHQVFRVNLPIRPTRHNFH SAADGQLGGIMKVYREWRISGENEFLISMYPKVKKSLDYCISTWDPRRVGSIEEPHHNTYDIEFWGPDGMHNSFYYGALS AFIRMSEFLDKDVTEYKKLLKKGRKFTETGLFNGEYFIQKIEWRGLNAKDPTVAQSFHSSYSPEAKEILEKEGPKYQYGN GCLSDGVLGSWLSRMCGMEETLNTEKVKSHLLSVHRYNFKKDLTDHANPQRSPYALGKEGGLLLGSWPKGGKLSLPFVYS NEVWTGIEYQVASHLMLQGEVEKGLEIVRACRQRYDGSVRNPFNEYECGHWYGRALSSYGLLQGLTGVRYDAVDKTLYIN SKIGDFISFISTESGFGNIELRSGKPFVKVVSGHIEVDRFVVSGKVVE
Sequences:
>Translated_848_residues MEKLKYSLLFMISILAISNRWVSANDIDDERNRIYNSSYSGKYNNRIAFPIGGIGTGMYCLEGTGYISHMSVWHRPEVFH EPGMFAALYVKGVCNGAKVLEGPVSDWRKFGMPNYGTGGSMGSILGLPRFDTVEFEARFPFAKVSLTDKDIPVKVTILGW SPFIPGDPDNSSLPVGGLEYSLENTSKEVQETIFSYHARNFLSWGKGLDAIKTMPHGFILSQSGTETEPHLQGDFAIFTD QDSLKINYCWFRGGWFDSLTMVWNAIEAGLMPQCPAIEKGAPGASMFVPVTLMPGEKKTIRIYTAWYVPNSTLRLGEEPE DWNDNNVDSARLAVEKADKGNYKPWYSSRFTGVNEVIDYFLSHYKILRNQTERFTDSFYRSTLPPEVIEAVSANLSILKS PTVMRQYDGRLWTWEGCADNWGSCHGSCTHVWNYAQAIPHLFPSLERSLRHTEFEEGQDLKGHQVFRVNLPIRPTRHNFH SAADGQLGGIMKVYREWRISGENEFLISMYPKVKKSLDYCISTWDPRRVGSIEEPHHNTYDIEFWGPDGMHNSFYYGALS AFIRMSEFLDKDVTEYKKLLKKGRKFTETGLFNGEYFIQKIEWRGLNAKDPTVAQSFHSSYSPEAKEILEKEGPKYQYGN GCLSDGVLGSWLSRMCGMEETLNTEKVKSHLLSVHRYNFKKDLTDHANPQRSPYALGKEGGLLLGSWPKGGKLSLPFVYS NEVWTGIEYQVASHLMLQGEVEKGLEIVRACRQRYDGSVRNPFNEYECGHWYGRALSSYGLLQGLTGVRYDAVDKTLYIN SKIGDFISFISTESGFGNIELRSGKPFVKVVSGHIEVDRFVVSGKVVE >Mature_848_residues MEKLKYSLLFMISILAISNRWVSANDIDDERNRIYNSSYSGKYNNRIAFPIGGIGTGMYCLEGTGYISHMSVWHRPEVFH EPGMFAALYVKGVCNGAKVLEGPVSDWRKFGMPNYGTGGSMGSILGLPRFDTVEFEARFPFAKVSLTDKDIPVKVTILGW SPFIPGDPDNSSLPVGGLEYSLENTSKEVQETIFSYHARNFLSWGKGLDAIKTMPHGFILSQSGTETEPHLQGDFAIFTD QDSLKINYCWFRGGWFDSLTMVWNAIEAGLMPQCPAIEKGAPGASMFVPVTLMPGEKKTIRIYTAWYVPNSTLRLGEEPE DWNDNNVDSARLAVEKADKGNYKPWYSSRFTGVNEVIDYFLSHYKILRNQTERFTDSFYRSTLPPEVIEAVSANLSILKS PTVMRQYDGRLWTWEGCADNWGSCHGSCTHVWNYAQAIPHLFPSLERSLRHTEFEEGQDLKGHQVFRVNLPIRPTRHNFH SAADGQLGGIMKVYREWRISGENEFLISMYPKVKKSLDYCISTWDPRRVGSIEEPHHNTYDIEFWGPDGMHNSFYYGALS AFIRMSEFLDKDVTEYKKLLKKGRKFTETGLFNGEYFIQKIEWRGLNAKDPTVAQSFHSSYSPEAKEILEKEGPKYQYGN GCLSDGVLGSWLSRMCGMEETLNTEKVKSHLLSVHRYNFKKDLTDHANPQRSPYALGKEGGLLLGSWPKGGKLSLPFVYS NEVWTGIEYQVASHLMLQGEVEKGLEIVRACRQRYDGSVRNPFNEYECGHWYGRALSSYGLLQGLTGVRYDAVDKTLYIN SKIGDFISFISTESGFGNIELRSGKPFVKVVSGHIEVDRFVVSGKVVE
Specific function: Unknown
COG id: COG4354
COG function: function code G; Predicted bile acid beta-glucosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96075; Mature: 96075
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLKYSLLFMISILAISNRWVSANDIDDERNRIYNSSYSGKYNNRIAFPIGGIGTGMYC CCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEE LEGTGYISHMSVWHRPEVFHEPGMFAALYVKGVCNGAKVLEGPVSDWRKFGMPNYGTGGS EECCCCHHHHHHHCCCCHHCCCCCEEEHHHHHHCCCHHHHCCCHHHHHHCCCCCCCCCCC MGSILGLPRFDTVEFEARFPFAKVSLTDKDIPVKVTILGWSPFIPGDPDNSSLPVGGLEY CHHHCCCCCCCCEEEEECCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEE SLENTSKEVQETIFSYHARNFLSWGKGLDAIKTMPHGFILSQSGTETEPHLQGDFAIFTD EHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEC QDSLKINYCWFRGGWFDSLTMVWNAIEAGLMPQCPAIEKGAPGASMFVPVTLMPGEKKTI CCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEE RIYTAWYVPNSTLRLGEEPEDWNDNNVDSARLAVEKADKGNYKPWYSSRFTGVNEVIDYF EEEEEEECCCCCEECCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHH LSHYKILRNQTERFTDSFYRSTLPPEVIEAVSANLSILKSPTVMRQYDGRLWTWEGCADN HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEECCCHHHHHHCCCEEEECCCCCC WGSCHGSCTHVWNYAQAIPHLFPSLERSLRHTEFEEGQDLKGHQVFRVNLPIRPTRHNFH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCC SAADGQLGGIMKVYREWRISGENEFLISMYPKVKKSLDYCISTWDPRRVGSIEEPHHNTY CCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCCCCHHCCCCCCCCCCEE DIEFWGPDGMHNSFYYGALSAFIRMSEFLDKDVTEYKKLLKKGRKFTETGLFNGEYFIQK EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEEEE IEWRGLNAKDPTVAQSFHSSYSPEAKEILEKEGPKYQYGNGCLSDGVLGSWLSRMCGMEE EEECCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCHH TLNTEKVKSHLLSVHRYNFKKDLTDHANPQRSPYALGKEGGLLLGSWPKGGKLSLPFVYS HCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEC NEVWTGIEYQVASHLMLQGEVEKGLEIVRACRQRYDGSVRNPFNEYECGHWYGRALSSYG CCEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH LLQGLTGVRYDAVDKTLYINSKIGDFISFISTESGFGNIELRSGKPFVKVVSGHIEVDRF HHHCCCCCEEECCCCEEEECCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCEEEEEE VVSGKVVE EECCEECC >Mature Secondary Structure MEKLKYSLLFMISILAISNRWVSANDIDDERNRIYNSSYSGKYNNRIAFPIGGIGTGMYC CCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEE LEGTGYISHMSVWHRPEVFHEPGMFAALYVKGVCNGAKVLEGPVSDWRKFGMPNYGTGGS EECCCCHHHHHHHCCCCHHCCCCCEEEHHHHHHCCCHHHHCCCHHHHHHCCCCCCCCCCC MGSILGLPRFDTVEFEARFPFAKVSLTDKDIPVKVTILGWSPFIPGDPDNSSLPVGGLEY CHHHCCCCCCCCEEEEECCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEE SLENTSKEVQETIFSYHARNFLSWGKGLDAIKTMPHGFILSQSGTETEPHLQGDFAIFTD EHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEC QDSLKINYCWFRGGWFDSLTMVWNAIEAGLMPQCPAIEKGAPGASMFVPVTLMPGEKKTI CCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEE RIYTAWYVPNSTLRLGEEPEDWNDNNVDSARLAVEKADKGNYKPWYSSRFTGVNEVIDYF EEEEEEECCCCCEECCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHH LSHYKILRNQTERFTDSFYRSTLPPEVIEAVSANLSILKSPTVMRQYDGRLWTWEGCADN HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEECCCHHHHHHCCCEEEECCCCCC WGSCHGSCTHVWNYAQAIPHLFPSLERSLRHTEFEEGQDLKGHQVFRVNLPIRPTRHNFH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCC SAADGQLGGIMKVYREWRISGENEFLISMYPKVKKSLDYCISTWDPRRVGSIEEPHHNTY CCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCCCCHHCCCCCCCCCCEE DIEFWGPDGMHNSFYYGALSAFIRMSEFLDKDVTEYKKLLKKGRKFTETGLFNGEYFIQK EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEEEE IEWRGLNAKDPTVAQSFHSSYSPEAKEILEKEGPKYQYGNGCLSDGVLGSWLSRMCGMEE EEECCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCHH TLNTEKVKSHLLSVHRYNFKKDLTDHANPQRSPYALGKEGGLLLGSWPKGGKLSLPFVYS HCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEC NEVWTGIEYQVASHLMLQGEVEKGLEIVRACRQRYDGSVRNPFNEYECGHWYGRALSSYG CCEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH LLQGLTGVRYDAVDKTLYINSKIGDFISFISTESGFGNIELRSGKPFVKVVSGHIEVDRF HHHCCCCCEEECCCCEEEECCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCEEEEEE VVSGKVVE EECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA