| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348310
Identifier: 29348310
GI number: 29348310
Start: 3630640
End: 3631665
Strand: Reverse
Name: 29348310
Synonym: BT_2901
Alternate gene names: NA
Gene position: 3631665-3630640 (Counterclockwise)
Preceding gene: 29348311
Following gene: 29348309
Centisome position: 58.01
GC content: 42.59
Gene sequence:
>1026_bases ATGAAACATCTACTTGCTGGTATTTTAGTATGGGTGATATGGGGACTTTGTTCTTGTCAGTCTGATGGTAAGGTGATCAT TCCTTCACCCATTTATGTAGATAATCACTATCATGGTCCGGCTGATCCGGAGATAACCTGGAATCCTAAAACAGAAGAAT GGATGATTTTTTATACATCACGTCGTCCTTTTAAAGATCAGGCTTCTTATGTAGGAACGCCTGTGGGGGTTGCTGTGTCC AAAGATTTTGTACATTGGAAGTTTGCGGGATATTGCTCGTTCGATGGTGTAGGCGGTCAGCCGGATAGTGAGAAAACGTA TTGGGCACCGGGTGTGATTGTGGAAGGTGATAGTGCCCATATGTTTGTGACTTTGAAAGATGACTCTACTCCGGTCTGGG GTGGACCTAGTAACATTGTTCATTTCTCTGCACCTTTGGAAGATATGATTTCAGGGTGGAGACGGGTAAATACAGTGGTG GATACTCCGATTTCTATTGATGCGACTGTTGTAAAGAATGGTGATCGTTGGGATATGTGGTATCGTGACCGTCCGACAGA AGATACAGGCGGATTGTATTATGCACAAAGTAATGATTTGTATCATTGGACATTAAAGGGGCTTGCCAAAGGCGATATTA ATAATGTCGAGGTGACGAAGCATACATATCAGGAGGGGGCTTATGCTTTTCAGTGGAAAGGTTATTTCTGGATAATAGCT GATCCTCATAAAGGATTGGCCGTGTATCGTTCGAAAGATGCGGAGAACTGGGAATATCAAGGAATTGTCATGTATGAACC GGGTACTCGGTTCTTTGACAATACTCGCGCCCGGCATCCTAGTGTCATTATCAGAAATGATCGGGCATTCATTGTATACC ATGTGCAACCCTTTTTAGGATATAATCCAAATACACACGAGGCTGGTGATGATGTTTACCAGAAACTGAGTTTCTTGCAG ATGGCGGAATTGGAGTTTAAGGATGGAAAACTTATTTGTGACCGTAATAAGGTACTGTATAAATAA
Upstream 100 bases:
>100_bases TTCCGGAGGTTCGCTATATAAGAATTAAGGTTCTCGATTCATGGAGTGGACAGGGATATGTACAGTTCTCGGAATTTACA TTTTATAAAAGTGAATAAAA
Downstream 100 bases:
>100_bases GATTGCAGGATATTGGATGTCATTATATTAGATATTATTTCTGTAAATGAGTAAATAGATTAAGTAAAGCGTGGAATATT ACCACATATTTCACGCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Glycoside Hydrolase Family Protein
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MKHLLAGILVWVIWGLCSCQSDGKVIIPSPIYVDNHYHGPADPEITWNPKTEEWMIFYTSRRPFKDQASYVGTPVGVAVS KDFVHWKFAGYCSFDGVGGQPDSEKTYWAPGVIVEGDSAHMFVTLKDDSTPVWGGPSNIVHFSAPLEDMISGWRRVNTVV DTPISIDATVVKNGDRWDMWYRDRPTEDTGGLYYAQSNDLYHWTLKGLAKGDINNVEVTKHTYQEGAYAFQWKGYFWIIA DPHKGLAVYRSKDAENWEYQGIVMYEPGTRFFDNTRARHPSVIIRNDRAFIVYHVQPFLGYNPNTHEAGDDVYQKLSFLQ MAELEFKDGKLICDRNKVLYK
Sequences:
>Translated_341_residues MKHLLAGILVWVIWGLCSCQSDGKVIIPSPIYVDNHYHGPADPEITWNPKTEEWMIFYTSRRPFKDQASYVGTPVGVAVS KDFVHWKFAGYCSFDGVGGQPDSEKTYWAPGVIVEGDSAHMFVTLKDDSTPVWGGPSNIVHFSAPLEDMISGWRRVNTVV DTPISIDATVVKNGDRWDMWYRDRPTEDTGGLYYAQSNDLYHWTLKGLAKGDINNVEVTKHTYQEGAYAFQWKGYFWIIA DPHKGLAVYRSKDAENWEYQGIVMYEPGTRFFDNTRARHPSVIIRNDRAFIVYHVQPFLGYNPNTHEAGDDVYQKLSFLQ MAELEFKDGKLICDRNKVLYK >Mature_341_residues MKHLLAGILVWVIWGLCSCQSDGKVIIPSPIYVDNHYHGPADPEITWNPKTEEWMIFYTSRRPFKDQASYVGTPVGVAVS KDFVHWKFAGYCSFDGVGGQPDSEKTYWAPGVIVEGDSAHMFVTLKDDSTPVWGGPSNIVHFSAPLEDMISGWRRVNTVV DTPISIDATVVKNGDRWDMWYRDRPTEDTGGLYYAQSNDLYHWTLKGLAKGDINNVEVTKHTYQEGAYAFQWKGYFWIIA DPHKGLAVYRSKDAENWEYQGIVMYEPGTRFFDNTRARHPSVIIRNDRAFIVYHVQPFLGYNPNTHEAGDDVYQKLSFLQ MAELEFKDGKLICDRNKVLYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39059; Mature: 39059
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHLLAGILVWVIWGLCSCQSDGKVIIPSPIYVDNHYHGPADPEITWNPKTEEWMIFYTS CHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEECCCCCCCCCCEEEECCCCCEEEEEEEC RRPFKDQASYVGTPVGVAVSKDFVHWKFAGYCSFDGVGGQPDSEKTYWAPGVIVEGDSAH CCCCCHHHHHCCCCEEEEEECCEEEEEEEEEEEECCCCCCCCCCCEEECCCEEEECCCCE MFVTLKDDSTPVWGGPSNIVHFSAPLEDMISGWRRVNTVVDTPISIDATVVKNGDRWDMW EEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCEECCCEEEEEEEEECCCEEEEE YRDRPTEDTGGLYYAQSNDLYHWTLKGLAKGDINNVEVTKHTYQEGAYAFQWKGYFWIIA ECCCCCCCCCCEEEEECCCEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEECCEEEEEE DPHKGLAVYRSKDAENWEYQGIVMYEPGTRFFDNTRARHPSVIIRNDRAFIVYHVQPFLG CCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEECHHHC YNPNTHEAGDDVYQKLSFLQMAELEFKDGKLICDRNKVLYK CCCCCCCCHHHHHHHHHHHHHEEEEECCCCEEECCCCEECC >Mature Secondary Structure MKHLLAGILVWVIWGLCSCQSDGKVIIPSPIYVDNHYHGPADPEITWNPKTEEWMIFYTS CHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEECCCCCCCCCCEEEECCCCCEEEEEEEC RRPFKDQASYVGTPVGVAVSKDFVHWKFAGYCSFDGVGGQPDSEKTYWAPGVIVEGDSAH CCCCCHHHHHCCCCEEEEEECCEEEEEEEEEEEECCCCCCCCCCCEEECCCEEEECCCCE MFVTLKDDSTPVWGGPSNIVHFSAPLEDMISGWRRVNTVVDTPISIDATVVKNGDRWDMW EEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCEECCCEEEEEEEEECCCEEEEE YRDRPTEDTGGLYYAQSNDLYHWTLKGLAKGDINNVEVTKHTYQEGAYAFQWKGYFWIIA ECCCCCCCCCCEEEEECCCEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEECCEEEEEE DPHKGLAVYRSKDAENWEYQGIVMYEPGTRFFDNTRARHPSVIIRNDRAFIVYHVQPFLG CCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEECHHHC YNPNTHEAGDDVYQKLSFLQMAELEFKDGKLICDRNKVLYK CCCCCCCCHHHHHHHHHHHHHEEEEECCCCEEECCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA