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The map label for this gene is 29348304

Identifier: 29348304

GI number: 29348304

Start: 3618732

End: 3619724

Strand: Reverse

Name: 29348304

Synonym: BT_2895

Alternate gene names: NA

Gene position: 3619724-3618732 (Counterclockwise)

Preceding gene: 29348305

Following gene: 29348303

Centisome position: 57.82

GC content: 40.48

Gene sequence:

>993_bases
ATGTTCAAGAAAGAAATATATAGTCTATTGCTATTCTCCTTTGGGCTTTTGTTTACTTGTTGTGGAGAGAGTGCAACAGA
TGACGAGGAAAAAGATAATAATGGTCAGGGAAGTGTTAGTGTGGAGACTAATTACCTGCCTATTGCAGACCCCTACGTGA
TGTTCTATAATAATAAATATTATGCTTATGGTACAGGAGGAACAACTGCCGGAGAGGGGTTTGCCTGCTTTTCTTCTGAC
GATTTGAAAAACTGGAAACGTGAGGGGCAGGCTCTATCTGCAACCGATTCTTATGGTACATGGGGTTTTTGGGCACCGGA
GGTCTATTACGTTGAGTCTAAGAAGAAATTTTATCTGTTCTATTCAGCAGAAGAACATATTTGCGTAGCGACTTCTACTA
CTCCTGAAGGTCCATTCCGACAAGAAGTAAAGCAGCCGATCTGGAGTGAGAAAAGCATTGATACTTCTTTGTTTATAGAT
GATGACGGTACTCCATATCTTTATTTCGTACGTTTTACAGATGGGAATGTGATATGGGTGGCTCAGATGACTGATGACTT
GATGAGTATAAAGACAGAGACTTTGAATCAATGTATAAAAGCTGAAGTATCATGGGAACTTTTGCAAGGTAAAGTAGCGG
AAGGACCTTCTCTTTTGAAAAAGAATGGCGTGTATTATCTGATTTATTCTGCTAATCATTATGAAAATAAAGGATATGGA
GTTGGATATGCAACCTCAGATACTCCTATGGGGCCTTGGGTGAAGTATAGCAAGAATCCACTTTTACAGGGTGATGCAGC
TACCGGCTTAGTAGGTACAGGACATGGAGCGCCGTTCCAATGCAAAGATGGTAGTTGGAAGTATATATTTCATGCTCATT
GGAGTGCTGCGGAGATACAACCTCGAACATCGTATATTAAGGATTTTGCCATTTCGGATCAGGGAGTGGTTACTATTAGT
GGAACTGTAATTAAGCCGAGAGTTCTGAAGTAA

Upstream 100 bases:

>100_bases
TGTATATGTAGGTGATTGTGAGAATTGGCGTATTCGGGTAATCAAAGAAGAATGATTGTTAGAACTAATAACTGGTATAG
AAAATTAAAGAGTATATTTT

Downstream 100 bases:

>100_bases
AAGGATACCGGATAAATGAATATCATTTTTAATTTAAAACTAATACTATAATGAATAAAAATAATCGAATGAGCAAGAGG
CTTTTGAACTATGTCATTGT

Product: endo-1,4-beta-xylanase

Products: NA

Alternate protein names: 1,4-beta-D-xylan xylohydrolase; Xylan 1,4-beta-xylosidase [H]

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MFKKEIYSLLLFSFGLLFTCCGESATDDEEKDNNGQGSVSVETNYLPIADPYVMFYNNKYYAYGTGGTTAGEGFACFSSD
DLKNWKREGQALSATDSYGTWGFWAPEVYYVESKKKFYLFYSAEEHICVATSTTPEGPFRQEVKQPIWSEKSIDTSLFID
DDGTPYLYFVRFTDGNVIWVAQMTDDLMSIKTETLNQCIKAEVSWELLQGKVAEGPSLLKKNGVYYLIYSANHYENKGYG
VGYATSDTPMGPWVKYSKNPLLQGDAATGLVGTGHGAPFQCKDGSWKYIFHAHWSAAEIQPRTSYIKDFAISDQGVVTIS
GTVIKPRVLK

Sequences:

>Translated_330_residues
MFKKEIYSLLLFSFGLLFTCCGESATDDEEKDNNGQGSVSVETNYLPIADPYVMFYNNKYYAYGTGGTTAGEGFACFSSD
DLKNWKREGQALSATDSYGTWGFWAPEVYYVESKKKFYLFYSAEEHICVATSTTPEGPFRQEVKQPIWSEKSIDTSLFID
DDGTPYLYFVRFTDGNVIWVAQMTDDLMSIKTETLNQCIKAEVSWELLQGKVAEGPSLLKKNGVYYLIYSANHYENKGYG
VGYATSDTPMGPWVKYSKNPLLQGDAATGLVGTGHGAPFQCKDGSWKYIFHAHWSAAEIQPRTSYIKDFAISDQGVVTIS
GTVIKPRVLK
>Mature_330_residues
MFKKEIYSLLLFSFGLLFTCCGESATDDEEKDNNGQGSVSVETNYLPIADPYVMFYNNKYYAYGTGGTTAGEGFACFSSD
DLKNWKREGQALSATDSYGTWGFWAPEVYYVESKKKFYLFYSAEEHICVATSTTPEGPFRQEVKQPIWSEKSIDTSLFID
DDGTPYLYFVRFTDGNVIWVAQMTDDLMSIKTETLNQCIKAEVSWELLQGKVAEGPSLLKKNGVYYLIYSANHYENKGYG
VGYATSDTPMGPWVKYSKNPLLQGDAATGLVGTGHGAPFQCKDGSWKYIFHAHWSAAEIQPRTSYIKDFAISDQGVVTIS
GTVIKPRVLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 43 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR013320
- InterPro:   IPR006710 [H]

Pfam domain/function: PF04616 Glyco_hydro_43 [H]

EC number: =3.2.1.37 [H]

Molecular weight: Translated: 36923; Mature: 36923

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKEIYSLLLFSFGLLFTCCGESATDDEEKDNNGQGSVSVETNYLPIADPYVMFYNNKY
CCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEEECEEECCCCEEEEECCEE
YAYGTGGTTAGEGFACFSSDDLKNWKREGQALSATDSYGTWGFWAPEVYYVESKKKFYLF
EEEECCCCCCCCCEEEECCCHHHHHHHCCCEEECCCCCCCCCEECCEEEEEECCCEEEEE
YSAEEHICVATSTTPEGPFRQEVKQPIWSEKSIDTSLFIDDDGTPYLYFVRFTDGNVIWV
EECCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCEEEE
AQMTDDLMSIKTETLNQCIKAEVSWELLQGKVAEGPSLLKKNGVYYLIYSANHYENKGYG
EECCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHCCCEEEEEEECCCCCCCCEE
VGYATSDTPMGPWVKYSKNPLLQGDAATGLVGTGHGAPFQCKDGSWKYIFHAHWSAAEIQ
EEEECCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCEEECCCCEEEEEEEECCCCCCC
PRTSYIKDFAISDQGVVTISGTVIKPRVLK
CCHHHHHHHEECCCCEEEEECEEECCEECC
>Mature Secondary Structure
MFKKEIYSLLLFSFGLLFTCCGESATDDEEKDNNGQGSVSVETNYLPIADPYVMFYNNKY
CCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEEECEEECCCCEEEEECCEE
YAYGTGGTTAGEGFACFSSDDLKNWKREGQALSATDSYGTWGFWAPEVYYVESKKKFYLF
EEEECCCCCCCCCEEEECCCHHHHHHHCCCEEECCCCCCCCCEECCEEEEEECCCEEEEE
YSAEEHICVATSTTPEGPFRQEVKQPIWSEKSIDTSLFIDDDGTPYLYFVRFTDGNVIWV
EECCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCEEEE
AQMTDDLMSIKTETLNQCIKAEVSWELLQGKVAEGPSLLKKNGVYYLIYSANHYENKGYG
EECCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHCCCEEEEEEECCCCCCCCEE
VGYATSDTPMGPWVKYSKNPLLQGDAATGLVGTGHGAPFQCKDGSWKYIFHAHWSAAEIQ
EEEECCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCEEECCCCEEEEEEEECCCCCCC
PRTSYIKDFAISDQGVVTISGTVIKPRVLK
CCHHHHHHHEECCCCEEEEECEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA