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The map label for this gene is ydjH [C]

Identifier: 29348208

GI number: 29348208

Start: 3473626

End: 3474615

Strand: Reverse

Name: ydjH [C]

Synonym: BT_2799

Alternate gene names: 29348208

Gene position: 3474615-3473626 (Counterclockwise)

Preceding gene: 29348209

Following gene: 29348207

Centisome position: 55.5

GC content: 42.22

Gene sequence:

>990_bases
ATGGACAAAATAATAGGATTGGGCAACGCCCTGATAGACGTACTTGCAACCCTGAAAGACGATACACTCTTGGATGAACT
GGAATTACCCAAGGGAAGCATGCAACTCATCGATGACGCTAAGTTACAGCAGATTAACACAAAATTTTCACAAATGAAAA
CGCATCTGGCAACAGGCGGATCGGCAGGAAATGCCATACTTGGACTCGCTTGTCTGGGTGCCGGAACAGGTTTTATCGGA
AAAGTAGGAAATGATCATTATGGCGATTTTTTTCGGAAAAATCTGCAGAAAAATAATATTGAAGACAATTTATTGACCTC
CGAACAGCTTCCTTCGGGAGTGGCATCCACTTTTATTTCTCAGGATGGAGAGCGTACTTTTGGTACTTATCTGGGAGCGG
CCGCTTCTTTGAAAGCTGAAGATCTGACATTGGAGATGTTCAAAGGATATGCATACTTATTTATAGAAGGATACCTTGTT
CAGGATCACGAAATGATTCTTCATGCCATCGAACTGGCTAAAGAGGCTGGCCTGCAAATCTGTCTCGACATGGCAAGTTA
TAATATCGTGGAGAATGATCTGGAATTTTTCTCCTTATTAATAAATAAGTATGTGGATATCGTTTTTGCAAACGAGGAAG
AAGCGAAAGCATTTACCGGCGAAGAACCGGAGGAAGCTCTGAGAGTGATAGCCAAGAAATGCAGCATTGCTATTGTGAAA
GTTGGAGCAAACGGATCTTATATCCGTAAAGGTACGGAAGAAATTAAAGTGTCGGCTATTCCTGTAGAAAAAGTTCTGGA
TACCACCGGCGCAGGCGATTATTTCGCTGCCGGATTTCTGTATGGTCTGACGTGCGGATACTCGCTCGAAAAATGTGCAA
AAATTGGTTCTATTCTCTCGGGAAATGTTATTCAGGTGATTGGAACAACAATCTCTCCGGAGCGCTGGGATGAAATTAAG
TTAAATATTAACAAGGTTCTGGCGGAATAA

Upstream 100 bases:

>100_bases
CTAACCGACTGAGCTAAGGAAGAATGTTTTTCTCAATTGCGATGCAAAAGTAGTAGGTTTTTTTGAAATATGCAATATCT
TTGCAAAAAAAATATTGAGA

Downstream 100 bases:

>100_bases
CCAAGGTTTGAGTTACTTTTACGTCTCATTTTAATGAAAGATATATGAAAAAATTGCTGAATAGGCGGATAGCTCTTGTT
TTGGTGGCTGTAATAGCTAC

Product: PfkB family carbohydrate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MDKIIGLGNALIDVLATLKDDTLLDELELPKGSMQLIDDAKLQQINTKFSQMKTHLATGGSAGNAILGLACLGAGTGFIG
KVGNDHYGDFFRKNLQKNNIEDNLLTSEQLPSGVASTFISQDGERTFGTYLGAAASLKAEDLTLEMFKGYAYLFIEGYLV
QDHEMILHAIELAKEAGLQICLDMASYNIVENDLEFFSLLINKYVDIVFANEEEAKAFTGEEPEEALRVIAKKCSIAIVK
VGANGSYIRKGTEEIKVSAIPVEKVLDTTGAGDYFAAGFLYGLTCGYSLEKCAKIGSILSGNVIQVIGTTISPERWDEIK
LNINKVLAE

Sequences:

>Translated_329_residues
MDKIIGLGNALIDVLATLKDDTLLDELELPKGSMQLIDDAKLQQINTKFSQMKTHLATGGSAGNAILGLACLGAGTGFIG
KVGNDHYGDFFRKNLQKNNIEDNLLTSEQLPSGVASTFISQDGERTFGTYLGAAASLKAEDLTLEMFKGYAYLFIEGYLV
QDHEMILHAIELAKEAGLQICLDMASYNIVENDLEFFSLLINKYVDIVFANEEEAKAFTGEEPEEALRVIAKKCSIAIVK
VGANGSYIRKGTEEIKVSAIPVEKVLDTTGAGDYFAAGFLYGLTCGYSLEKCAKIGSILSGNVIQVIGTTISPERWDEIK
LNINKVLAE
>Mature_329_residues
MDKIIGLGNALIDVLATLKDDTLLDELELPKGSMQLIDDAKLQQINTKFSQMKTHLATGGSAGNAILGLACLGAGTGFIG
KVGNDHYGDFFRKNLQKNNIEDNLLTSEQLPSGVASTFISQDGERTFGTYLGAAASLKAEDLTLEMFKGYAYLFIEGYLV
QDHEMILHAIELAKEAGLQICLDMASYNIVENDLEFFSLLINKYVDIVFANEEEAKAFTGEEPEEALRVIAKKCSIAIVK
VGANGSYIRKGTEEIKVSAIPVEKVLDTTGAGDYFAAGFLYGLTCGYSLEKCAKIGSILSGNVIQVIGTTISPERWDEIK
LNINKVLAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI32484973, Length=340, Percent_Identity=25.8823529411765, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI32484975, Length=340, Percent_Identity=25.8823529411765, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI11545855, Length=272, Percent_Identity=28.6764705882353, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI4557693, Length=280, Percent_Identity=23.9285714285714, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI5670342, Length=277, Percent_Identity=22.7436823104693, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI87081971, Length=265, Percent_Identity=27.9245283018868, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786684, Length=230, Percent_Identity=25.6521739130435, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1789775, Length=275, Percent_Identity=27.6363636363636, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790193, Length=241, Percent_Identity=26.1410788381743, Blast_Score=61, Evalue=9e-11,
Organism=Escherichia coli, GI87082281, Length=260, Percent_Identity=25.3846153846154, Blast_Score=61, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17541820, Length=333, Percent_Identity=24.6246246246246, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17532905, Length=278, Percent_Identity=26.6187050359712, Blast_Score=73, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6322565, Length=335, Percent_Identity=26.2686567164179, Blast_Score=79, Evalue=9e-16,
Organism=Drosophila melanogaster, GI21355521, Length=342, Percent_Identity=25.1461988304094, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24663633, Length=337, Percent_Identity=24.6290801186944, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21356339, Length=337, Percent_Identity=24.6290801186944, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 35644; Mature: 35644

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKIIGLGNALIDVLATLKDDTLLDELELPKGSMQLIDDAKLQQINTKFSQMKTHLATGG
CCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
SAGNAILGLACLGAGTGFIGKVGNDHYGDFFRKNLQKNNIEDNLLTSEQLPSGVASTFIS
CCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCHHHCCHHHHHHHHH
QDGERTFGTYLGAAASLKAEDLTLEMFKGYAYLFIEGYLVQDHEMILHAIELAKEAGLQI
CCCCHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEEEEEEECHHHHHHHHHHHHHHCCHHE
CLDMASYNIVENDLEFFSLLINKYVDIVFANEEEAKAFTGEEPEEALRVIAKKCSIAIVK
EHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHCCCCCCHHHHHHHHHHHCCEEEEE
VGANGSYIRKGTEEIKVSAIPVEKVLDTTGAGDYFAAGFLYGLTCGYSLEKCAKIGSILS
ECCCCCHHHCCCHHEEEEEECHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHC
GNVIQVIGTTISPERWDEIKLNINKVLAE
CCEEEEEECCCCCCCCHHHEEEHHHHHCC
>Mature Secondary Structure
MDKIIGLGNALIDVLATLKDDTLLDELELPKGSMQLIDDAKLQQINTKFSQMKTHLATGG
CCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
SAGNAILGLACLGAGTGFIGKVGNDHYGDFFRKNLQKNNIEDNLLTSEQLPSGVASTFIS
CCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCHHHCCHHHHHHHHH
QDGERTFGTYLGAAASLKAEDLTLEMFKGYAYLFIEGYLVQDHEMILHAIELAKEAGLQI
CCCCHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEEEEEEECHHHHHHHHHHHHHHCCHHE
CLDMASYNIVENDLEFFSLLINKYVDIVFANEEEAKAFTGEEPEEALRVIAKKCSIAIVK
EHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHCCCCCCHHHHHHHHHHHCCEEEEE
VGANGSYIRKGTEEIKVSAIPVEKVLDTTGAGDYFAAGFLYGLTCGYSLEKCAKIGSILS
ECCCCCHHHCCCHHEEEEEECHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHC
GNVIQVIGTTISPERWDEIKLNINKVLAE
CCEEEEEECCCCCCCCHHHEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]