Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348186

Identifier: 29348186

GI number: 29348186

Start: 3442351

End: 3444303

Strand: Reverse

Name: 29348186

Synonym: BT_2777

Alternate gene names: NA

Gene position: 3444303-3442351 (Counterclockwise)

Preceding gene: 29348191

Following gene: 29348185

Centisome position: 55.02

GC content: 41.01

Gene sequence:

>1953_bases
ATGGGTAAATACAAATTTATAGAAGAAAGAGTGGAAACAATGTCTTCGTCGGAGCTTAAGATATTCTTGAATATACTGAA
GAGCAGATCTAAGGAATTGATGTCAACTCTGGAGTCAGTAAGGGGAATAAAAGATTTGGAGGCTGTTTGTAAATCAACTC
AGAAACTAAACAATCGTGTTTCTGAGTTTGACGGAGGATCTTTTCTTATATTAGTGGTTGGACCCGTGAAATCGGGAAAA
TCTACTTTAGTAAATCTCATAGCACATGCTCACGTCAGCCCCACTCATTTCTTGGAGTGTACGGTGCGTCCGTCCATTAT
TTCAAAAGGACAGGAGGAATCCATTACCCGTATTTTTTCTGTTGCTGATAAAGCTAGAAAGGTAGAACAGTTTGATTCGG
TCATTGATAGCCTGCGCGGATTTGAAAAACTGGAAAACATTTCCGAGATAAGCATTGAAAAGAAAGAATTGAATGATGCT
AATCTGGAGGAGTGTGTTTCGTTAGCTTTGGAAGAAAGCGTGATAAATACAGATCATACGCTGGTGACATCCATAACAAC
TTCCGGTGGGGAGCTTTTGAAAGATAATATATTTCTGGTGGATATGCCCGGGCTGGATGGCGGGTATGTGAATTTGGATA
ATCCTATTTATGAAACGATCTCTCAAAGGGCAGATTTCGTGATATTTGTGCAAAGTTCAAATTCTGCTATATCGAAGGTT
TCCAATCGTTTTCTGAAGTTGCTGCAGGAGAATAATCCGAAAGTTCCGGTTTGTCTTCTACATAATGTGTTTGAAGCGGC
TTACTGGCATTCGGAAGAGGAGAAGCAGGCTGTAATTAAGGCACAGGTAGAATTTGCCGAGAATGAAATGGGCAGACGTA
ACTTCCAGTTGAAGGAGAATATATATAGTTTGAACTTGGGAAAAGTGGCGGATGCTGCCAGCTATGAGGGAATGGAGGAT
CTTCAGGAAGAAGCTGCGAAATTTCAGAGATTTGAGAAGGATTTGTATGGCAAGGTGATCTCCAATAGTACTGATATACG
TCTGAGAAGCGTAATCGGAAGAACGCTGAATCAGTTGGAAAAACTGGATAATTTAGTCGGAGAATCAATTGGCCAACAGG
AAGCAATCGATATAGAATATCAGGCTGCGGCAACTTCGTTTGACGAGTTACTCCGTCAGGCGAGTGAACTTAGTTACGAT
GGGAGCGATTTTAGAAAAATGGTGCAAGTCTATATGGATGATGATTTGAAAGAGTTTACTGAAATCGTTAGGGAGTATTA
TGATTCCGGATGCAATTCCGCATTTGCCGGTGGAGCGAAGGGGAAAGATGCGACACGCAGCCTTGTTACAAAGTTTATGA
CTGATTCGTCAGCGGCGATAAAAAGTAAGTTCCTTGATTCCCATGAACATAGCCTGGCCCGGCAGTATTTGCGGAAACTC
TCTAACTTGAAAGATGATGTGGCTTTTATAGAGAAGATGAATACTTTTCTGAAGCAGAAAGGTTGTGCACCTTTTGACTC
AGTGCCGCAAGTGACGGATTTTCCGGTGGTCGATTTTGATTTGCAGGGAGCTTTTGATGTGAAGAATATTAATAATCCGA
CTGTTCCGCATATCGGAATACCCAATCCGTTCGGGACTTATTCGACAATGGAAATTCAGAGTTTTCTGAGAAAAGCGATG
GAATGTATCACCGGAATCGATCATACGCATACCGGGAAAACGATCAAAGGATATCTTCAGCTGACTGTCGGGAAGAGTAT
ATATAAGGCGGCTAATGACCTTTATGATCAGTATGTGCCTGTACGCAAACAAAGTATCATTGATTTTTTGGAACAACAAA
AAACAATGTATCTGAATGCGCTGGTGTCTGATAAAGAAGAATTTGACAGGAAGGATGCGTTGCTTCGGTCAATAAATGCA
CAAGTTCAGAGTTTTAAGGATTCAATAAGATAA

Upstream 100 bases:

>100_bases
TGCTCTATACATTTTTTATTTCCCGACAAACTGCTAACTTTATCATCATTATTATAATGACATGTGAATAGTCGGTTGTA
CCATTATTTAAATCTCGTTT

Downstream 100 bases:

>100_bases
GAATAAGCCAATGAAACGAAATTTATTAATTATCACACTCCTGTTTTTGGGCTCTTTTGTGATTTTATTGTTGGGTAACA
TCATTATTATTGGTGAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 650; Mature: 649

Protein sequence:

>650_residues
MGKYKFIEERVETMSSSELKIFLNILKSRSKELMSTLESVRGIKDLEAVCKSTQKLNNRVSEFDGGSFLILVVGPVKSGK
STLVNLIAHAHVSPTHFLECTVRPSIISKGQEESITRIFSVADKARKVEQFDSVIDSLRGFEKLENISEISIEKKELNDA
NLEECVSLALEESVINTDHTLVTSITTSGGELLKDNIFLVDMPGLDGGYVNLDNPIYETISQRADFVIFVQSSNSAISKV
SNRFLKLLQENNPKVPVCLLHNVFEAAYWHSEEEKQAVIKAQVEFAENEMGRRNFQLKENIYSLNLGKVADAASYEGMED
LQEEAAKFQRFEKDLYGKVISNSTDIRLRSVIGRTLNQLEKLDNLVGESIGQQEAIDIEYQAAATSFDELLRQASELSYD
GSDFRKMVQVYMDDDLKEFTEIVREYYDSGCNSAFAGGAKGKDATRSLVTKFMTDSSAAIKSKFLDSHEHSLARQYLRKL
SNLKDDVAFIEKMNTFLKQKGCAPFDSVPQVTDFPVVDFDLQGAFDVKNINNPTVPHIGIPNPFGTYSTMEIQSFLRKAM
ECITGIDHTHTGKTIKGYLQLTVGKSIYKAANDLYDQYVPVRKQSIIDFLEQQKTMYLNALVSDKEEFDRKDALLRSINA
QVQSFKDSIR

Sequences:

>Translated_650_residues
MGKYKFIEERVETMSSSELKIFLNILKSRSKELMSTLESVRGIKDLEAVCKSTQKLNNRVSEFDGGSFLILVVGPVKSGK
STLVNLIAHAHVSPTHFLECTVRPSIISKGQEESITRIFSVADKARKVEQFDSVIDSLRGFEKLENISEISIEKKELNDA
NLEECVSLALEESVINTDHTLVTSITTSGGELLKDNIFLVDMPGLDGGYVNLDNPIYETISQRADFVIFVQSSNSAISKV
SNRFLKLLQENNPKVPVCLLHNVFEAAYWHSEEEKQAVIKAQVEFAENEMGRRNFQLKENIYSLNLGKVADAASYEGMED
LQEEAAKFQRFEKDLYGKVISNSTDIRLRSVIGRTLNQLEKLDNLVGESIGQQEAIDIEYQAAATSFDELLRQASELSYD
GSDFRKMVQVYMDDDLKEFTEIVREYYDSGCNSAFAGGAKGKDATRSLVTKFMTDSSAAIKSKFLDSHEHSLARQYLRKL
SNLKDDVAFIEKMNTFLKQKGCAPFDSVPQVTDFPVVDFDLQGAFDVKNINNPTVPHIGIPNPFGTYSTMEIQSFLRKAM
ECITGIDHTHTGKTIKGYLQLTVGKSIYKAANDLYDQYVPVRKQSIIDFLEQQKTMYLNALVSDKEEFDRKDALLRSINA
QVQSFKDSIR
>Mature_649_residues
GKYKFIEERVETMSSSELKIFLNILKSRSKELMSTLESVRGIKDLEAVCKSTQKLNNRVSEFDGGSFLILVVGPVKSGKS
TLVNLIAHAHVSPTHFLECTVRPSIISKGQEESITRIFSVADKARKVEQFDSVIDSLRGFEKLENISEISIEKKELNDAN
LEECVSLALEESVINTDHTLVTSITTSGGELLKDNIFLVDMPGLDGGYVNLDNPIYETISQRADFVIFVQSSNSAISKVS
NRFLKLLQENNPKVPVCLLHNVFEAAYWHSEEEKQAVIKAQVEFAENEMGRRNFQLKENIYSLNLGKVADAASYEGMEDL
QEEAAKFQRFEKDLYGKVISNSTDIRLRSVIGRTLNQLEKLDNLVGESIGQQEAIDIEYQAAATSFDELLRQASELSYDG
SDFRKMVQVYMDDDLKEFTEIVREYYDSGCNSAFAGGAKGKDATRSLVTKFMTDSSAAIKSKFLDSHEHSLARQYLRKLS
NLKDDVAFIEKMNTFLKQKGCAPFDSVPQVTDFPVVDFDLQGAFDVKNINNPTVPHIGIPNPFGTYSTMEIQSFLRKAME
CITGIDHTHTGKTIKGYLQLTVGKSIYKAANDLYDQYVPVRKQSIIDFLEQQKTMYLNALVSDKEEFDRKDALLRSINAQ
VQSFKDSIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73143; Mature: 73011

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKYKFIEERVETMSSSELKIFLNILKSRSKELMSTLESVRGIKDLEAVCKSTQKLNNRV
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SEFDGGSFLILVVGPVKSGKSTLVNLIAHAHVSPTHFLECTVRPSIISKGQEESITRIFS
HHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCHHEEEEECHHHHCCCCHHHHHHHHH
VADKARKVEQFDSVIDSLRGFEKLENISEISIEKKELNDANLEECVSLALEESVINTDHT
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCE
LVTSITTSGGELLKDNIFLVDMPGLDGGYVNLDNPIYETISQRADFVIFVQSSNSAISKV
EEEEEECCCCHHHHCCEEEEECCCCCCCEECCCCHHHHHHHCCCCEEEEEECCCHHHHHH
SNRFLKLLQENNPKVPVCLLHNVFEAAYWHSEEEKQAVIKAQVEFAENEMGRRNFQLKEN
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
IYSLNLGKVADAASYEGMEDLQEEAAKFQRFEKDLYGKVISNSTDIRLRSVIGRTLNQLE
HHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
KLDNLVGESIGQQEAIDIEYQAAATSFDELLRQASELSYDGSDFRKMVQVYMDDDLKEFT
HHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHH
EIVREYYDSGCNSAFAGGAKGKDATRSLVTKFMTDSSAAIKSKFLDSHEHSLARQYLRKL
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SNLKDDVAFIEKMNTFLKQKGCAPFDSVPQVTDFPVVDFDLQGAFDVKNINNPTVPHIGI
HCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCC
PNPFGTYSTMEIQSFLRKAMECITGIDHTHTGKTIKGYLQLTVGKSIYKAANDLYDQYVP
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
VRKQSIIDFLEQQKTMYLNALVSDKEEFDRKDALLRSINAQVQSFKDSIR
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GKYKFIEERVETMSSSELKIFLNILKSRSKELMSTLESVRGIKDLEAVCKSTQKLNNRV
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SEFDGGSFLILVVGPVKSGKSTLVNLIAHAHVSPTHFLECTVRPSIISKGQEESITRIFS
HHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCHHEEEEECHHHHCCCCHHHHHHHHH
VADKARKVEQFDSVIDSLRGFEKLENISEISIEKKELNDANLEECVSLALEESVINTDHT
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCE
LVTSITTSGGELLKDNIFLVDMPGLDGGYVNLDNPIYETISQRADFVIFVQSSNSAISKV
EEEEEECCCCHHHHCCEEEEECCCCCCCEECCCCHHHHHHHCCCCEEEEEECCCHHHHHH
SNRFLKLLQENNPKVPVCLLHNVFEAAYWHSEEEKQAVIKAQVEFAENEMGRRNFQLKEN
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
IYSLNLGKVADAASYEGMEDLQEEAAKFQRFEKDLYGKVISNSTDIRLRSVIGRTLNQLE
HHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
KLDNLVGESIGQQEAIDIEYQAAATSFDELLRQASELSYDGSDFRKMVQVYMDDDLKEFT
HHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHH
EIVREYYDSGCNSAFAGGAKGKDATRSLVTKFMTDSSAAIKSKFLDSHEHSLARQYLRKL
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SNLKDDVAFIEKMNTFLKQKGCAPFDSVPQVTDFPVVDFDLQGAFDVKNINNPTVPHIGI
HCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCC
PNPFGTYSTMEIQSFLRKAMECITGIDHTHTGKTIKGYLQLTVGKSIYKAANDLYDQYVP
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
VRKQSIIDFLEQQKTMYLNALVSDKEEFDRKDALLRSINAQVQSFKDSIR
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA