| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is prpC [H]
Identifier: 29348181
GI number: 29348181
Start: 3434041
End: 3435690
Strand: Reverse
Name: prpC [H]
Synonym: BT_2772
Alternate gene names: 29348181
Gene position: 3435690-3434041 (Counterclockwise)
Preceding gene: 29348182
Following gene: 29348180
Centisome position: 54.88
GC content: 37.76
Gene sequence:
>1650_bases ATGAAAGAAGAAAATATATATAACTATTGTCACATTGCAGGGCGTACCGACATTGGCTGCAAACGTCAGGCAAATGAAGA CAGTATGGGCAACTTCGAAACGATCAATGGCCTTGCTGCTGTTGTATGTGACGGTATGGGAGGGCACGTCGGAGGAGCTA CGGCATCCCGCTTAGCTGTAGAAGCGATTCATGGTTTTCTTGACGGACAGTATTATGAAGATCCTCGTGAAGCCATTGGA GAAGCTATTGATGCTGCCAATAAGGCTATACTTCATCAGGCAATGATACAACCTGAGTTGCAGGGAATGGGGTCTACATG TGTATTGTTGTTGGTCCGTGACTCTAAAGTTTATATAGGTCATGTGGGAGATAGTCGTGTTTACCTAATACGTAACAGAT GTATAAAACAACTAACCAAGGATCACTCTTATGTACAGATGTTGGTGGATATGGGACAACTGACTAATGAGCAGGCAGAA CATCACCCACGGAAAAACGAAATAACAAATGCTTTAGGCATTGCCAATATGAAACCGGCTACAGTACTGCCTGATGCGAT TTTACCCGAAGCTGGAGATTGTTTTTTGCTTTGTTCGGATGGATTGAGCGGAATGATATCAGATAGGGAGATAGAACGCA TCGTCAGCAGACAATCTGAAATGGGGTCACAGGAACGTGTGGACTATTTAGTACAACGAGCAAGGGACAATGGGGGATTG GACAATATAACGGTAGAGATTGTAGAGTTTTCTATTACTCCTGGTTCGCCTTCTAAACCTCAAAGAAGAAAAATAGGAAT GATCATATTAACTGTCATTTTGCTGATATGTATTGGCGCCAGTGGAGGTTATTATTTTTGGAATAAGCATTTTAAGTCGG AATCTATTACTATATATAAATCCTTTATGCGAAGGGATACAATTATTATGTTGCCTGAAATTAAGTTCCAGAAAGGTGAA GATATTTTAGAAATAAATTATAAGCAAGGACATACGGAGATCCTTATGGGCAAAGAAAAAGAAAAGGTGATAGAAATAAA CCGTGCTCTGTCAAGTGATTCATTAAAGTATGATGAGGATATTGATGTGGCATATGGTAACCGTCTTTTAGTGTTTCGAC AAGAGTTTAAAAACGAACAATTGCGTTTTTCTTTGGCAGACTCTGTGAAGATATTCAAATTTGTTGTTCCTGTGGTAAAA GATATGACATTGACACAGCCGAAGCAAACTCATCAAGAATCTACTCCCTCTGTTGTAAATGATGTAAGTAATACCGCAAA TGGTAGTATTGTTGCTATTGTGGCAGCTACTGGAAAAGTGGATTCTCTTACATATAGAGTTGATGCTCAGTTTGTTCCTA AAAGAAAAGCCTTTTCTTTTATTGAAGGTGAGAATGCGTGTTTTTTAGTTGAAGGACAATCACAGCCTTCAAAACTCAAT CGTCATTTTCAGATAACTGACATAGAATATGATGCAACTTATTTCAAGAAAACAAAAAAGGAAACAGGATTTGATATCTC TTTTACAGAGAAAGAACCACCTAAAAAAATAGATATTGTAATAAAAGGAAAAGAGAAAGAAGGAGAGAACTCTACTGATG TATTACTTAATATAATTATTAGTCTTAATATTAATAAGGAAGGAAAATAG
Upstream 100 bases:
>100_bases TGTAGGTGACCGTGTACAGTTGTATACGAATGATGTTATTGTTTTGGGAGCTACCAAAATGATTTTCTTGGCTATTCCTC AATAAAAAGCAAATTAGGCA
Downstream 100 bases:
>100_bases TTATGCCTGAATATGAATTGATAAAAGTAATAGGTCAAGGAGGCATGGGCAGCGTCTATGAAGGGAGAAGTGGCGATGGG AAACGTGTAGCAATAAAGAT
Product: putative protein phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MKEENIYNYCHIAGRTDIGCKRQANEDSMGNFETINGLAAVVCDGMGGHVGGATASRLAVEAIHGFLDGQYYEDPREAIG EAIDAANKAILHQAMIQPELQGMGSTCVLLLVRDSKVYIGHVGDSRVYLIRNRCIKQLTKDHSYVQMLVDMGQLTNEQAE HHPRKNEITNALGIANMKPATVLPDAILPEAGDCFLLCSDGLSGMISDREIERIVSRQSEMGSQERVDYLVQRARDNGGL DNITVEIVEFSITPGSPSKPQRRKIGMIILTVILLICIGASGGYYFWNKHFKSESITIYKSFMRRDTIIMLPEIKFQKGE DILEINYKQGHTEILMGKEKEKVIEINRALSSDSLKYDEDIDVAYGNRLLVFRQEFKNEQLRFSLADSVKIFKFVVPVVK DMTLTQPKQTHQESTPSVVNDVSNTANGSIVAIVAATGKVDSLTYRVDAQFVPKRKAFSFIEGENACFLVEGQSQPSKLN RHFQITDIEYDATYFKKTKKETGFDISFTEKEPPKKIDIVIKGKEKEGENSTDVLLNIIISLNINKEGK
Sequences:
>Translated_549_residues MKEENIYNYCHIAGRTDIGCKRQANEDSMGNFETINGLAAVVCDGMGGHVGGATASRLAVEAIHGFLDGQYYEDPREAIG EAIDAANKAILHQAMIQPELQGMGSTCVLLLVRDSKVYIGHVGDSRVYLIRNRCIKQLTKDHSYVQMLVDMGQLTNEQAE HHPRKNEITNALGIANMKPATVLPDAILPEAGDCFLLCSDGLSGMISDREIERIVSRQSEMGSQERVDYLVQRARDNGGL DNITVEIVEFSITPGSPSKPQRRKIGMIILTVILLICIGASGGYYFWNKHFKSESITIYKSFMRRDTIIMLPEIKFQKGE DILEINYKQGHTEILMGKEKEKVIEINRALSSDSLKYDEDIDVAYGNRLLVFRQEFKNEQLRFSLADSVKIFKFVVPVVK DMTLTQPKQTHQESTPSVVNDVSNTANGSIVAIVAATGKVDSLTYRVDAQFVPKRKAFSFIEGENACFLVEGQSQPSKLN RHFQITDIEYDATYFKKTKKETGFDISFTEKEPPKKIDIVIKGKEKEGENSTDVLLNIIISLNINKEGK >Mature_549_residues MKEENIYNYCHIAGRTDIGCKRQANEDSMGNFETINGLAAVVCDGMGGHVGGATASRLAVEAIHGFLDGQYYEDPREAIG EAIDAANKAILHQAMIQPELQGMGSTCVLLLVRDSKVYIGHVGDSRVYLIRNRCIKQLTKDHSYVQMLVDMGQLTNEQAE HHPRKNEITNALGIANMKPATVLPDAILPEAGDCFLLCSDGLSGMISDREIERIVSRQSEMGSQERVDYLVQRARDNGGL DNITVEIVEFSITPGSPSKPQRRKIGMIILTVILLICIGASGGYYFWNKHFKSESITIYKSFMRRDTIIMLPEIKFQKGE DILEINYKQGHTEILMGKEKEKVIEINRALSSDSLKYDEDIDVAYGNRLLVFRQEFKNEQLRFSLADSVKIFKFVVPVVK DMTLTQPKQTHQESTPSVVNDVSNTANGSIVAIVAATGKVDSLTYRVDAQFVPKRKAFSFIEGENACFLVEGQSQPSKLN RHFQITDIEYDATYFKKTKKETGFDISFTEKEPPKKIDIVIKGKEKEGENSTDVLLNIIISLNINKEGK
Specific function: Protein phosphatase that dephosphorylates prkC and fusA (elongation factor G). PrpC and prkC are cotranscribed, which suggests that they form a functional couple in vivo, prpC's primary role being possibly to counter the action of prkC. May be involved in
COG id: COG0631
COG function: function code T; Serine/threonine protein phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015655 - InterPro: IPR001932 - InterPro: IPR014045 [H]
Pfam domain/function: PF00481 PP2C [H]
EC number: =3.1.3.16 [H]
Molecular weight: Translated: 61383; Mature: 61383
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEENIYNYCHIAGRTDIGCKRQANEDSMGNFETINGLAAVVCDGMGGHVGGATASRLAV CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCEEEEEECCCCCCCCCCHHHHHHH EAIHGFLDGQYYEDPREAIGEAIDAANKAILHQAMIQPELQGMGSTCVLLLVRDSKVYIG HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEEEEEEEECCEEEEE HVGDSRVYLIRNRCIKQLTKDHSYVQMLVDMGQLTNEQAEHHPRKNEITNALGIANMKPA ECCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCCCCCCC TVLPDAILPEAGDCFLLCSDGLSGMISDREIERIVSRQSEMGSQERVDYLVQRARDNGGL CCCCHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC DNITVEIVEFSITPGSPSKPQRRKIGMIILTVILLICIGASGGYYFWNKHFKSESITIYK CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHH SFMRRDTIIMLPEIKFQKGEDILEINYKQGHTEILMGKEKEKVIEINRALSSDSLKYDED HHHHCCCEEEECCCCCCCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCC IDVAYGNRLLVFRQEFKNEQLRFSLADSVKIFKFVVPVVKDMTLTQPKQTHQESTPSVVN CCEECCCEEEEEEHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHH DVSNTANGSIVAIVAATGKVDSLTYRVDAQFVPKRKAFSFIEGENACFLVEGQSQPSKLN HHCCCCCCCEEEEEEECCCCCEEEEEECCEECCCHHHHHEECCCCCEEEEECCCCHHHCC RHFQITDIEYDATYFKKTKKETGFDISFTEKEPPKKIDIVIKGKEKEGENSTDVLLNIII CCEEEEEEEECHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCCHHHEEEEEEE SLNINKEGK EEEECCCCC >Mature Secondary Structure MKEENIYNYCHIAGRTDIGCKRQANEDSMGNFETINGLAAVVCDGMGGHVGGATASRLAV CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHCCEEEEEECCCCCCCCCCHHHHHHH EAIHGFLDGQYYEDPREAIGEAIDAANKAILHQAMIQPELQGMGSTCVLLLVRDSKVYIG HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEEEEEEEECCEEEEE HVGDSRVYLIRNRCIKQLTKDHSYVQMLVDMGQLTNEQAEHHPRKNEITNALGIANMKPA ECCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCCCCCCC TVLPDAILPEAGDCFLLCSDGLSGMISDREIERIVSRQSEMGSQERVDYLVQRARDNGGL CCCCHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC DNITVEIVEFSITPGSPSKPQRRKIGMIILTVILLICIGASGGYYFWNKHFKSESITIYK CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHH SFMRRDTIIMLPEIKFQKGEDILEINYKQGHTEILMGKEKEKVIEINRALSSDSLKYDED HHHHCCCEEEECCCCCCCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCC IDVAYGNRLLVFRQEFKNEQLRFSLADSVKIFKFVVPVVKDMTLTQPKQTHQESTPSVVN CCEECCCEEEEEEHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHH DVSNTANGSIVAIVAATGKVDSLTYRVDAQFVPKRKAFSFIEGENACFLVEGQSQPSKLN HHCCCCCCCEEEEEEECCCCCEEEEEECCEECCCHHHHHEECCCCCEEEEECCCCHHHCC RHFQITDIEYDATYFKKTKKETGFDISFTEKEPPKKIDIVIKGKEKEGENSTDVLLNIII CCEEEEEEEECHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCCHHHEEEEEEE SLNINKEGK EEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]