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The map label for this gene is yvqK [H]

Identifier: 29348169

GI number: 29348169

Start: 3420898

End: 3421461

Strand: Reverse

Name: yvqK [H]

Synonym: BT_2760

Alternate gene names: 29348169

Gene position: 3421461-3420898 (Counterclockwise)

Preceding gene: 29348170

Following gene: 29348168

Centisome position: 54.65

GC content: 44.15

Gene sequence:

>564_bases
ATGAAAAAAAGCCTTGTATATACAAAGACCGGTGACAAAGGAACTACCAGTCTTGTCGGCGGAAGCCGCGTTCCGAAGAC
CCATATTCGTTTGGAAGCATACGGAACAATTGACGAACTTAATTCCCATCTGGGATGGCTGAATACGTATTTGCTGGATG
AGGCAGACCGGGATTTTATCCTGAGTATACAGCATAAGCTATTCTCTATCGGTTCGCATTTGGCAACAGACCAGGAAAAA
ACACAACTGAAAGCCGCCAGTATCCTTACTCCGGAAGATGTGGAACGCATCGAGCGCGAGATTGATAAGCTGGACGAACA
GTTGCCCGAACTTTGTGCCTTTATCATACCCGGAGGCAGCCGTGGAGCGGCTGTTTGTCATGTGTGCCGTACGATTTGCC
GGAGAGCCGAACGTCGCATTCTGACTCTGTCCGAAACTTGTACAATTTCTCCTGAAGTGTTAGCTTTTGTCAACAGATTA
TCAGATTATTTGTTTGTTTTATCCCGAAAAATTAATTTTGATGAACAAAATAGTGAAATATTCTGGGATAATAGTTGGAA
ATGA

Upstream 100 bases:

>100_bases
TTTTTTTGATACAACAAAGATTAAACAGCATTATATCGTCAACTTCTGATCACCTTTATACGTTAATCTTATATATAGTA
ATGATGAAAAATAGACGTTT

Downstream 100 bases:

>100_bases
TAGATTTTATTATACTTTTGCCGAAAAATAGAAAATAAGTATTCACTTTTTAATACTCAAGATTATGTATTGGACATTGG
AATTAGCATCGAAACTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Cob(I)alamin adenosyltransferase [H]

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKKSLVYTKTGDKGTTSLVGGSRVPKTHIRLEAYGTIDELNSHLGWLNTYLLDEADRDFILSIQHKLFSIGSHLATDQEK
TQLKAASILTPEDVERIEREIDKLDEQLPELCAFIIPGGSRGAAVCHVCRTICRRAERRILTLSETCTISPEVLAFVNRL
SDYLFVLSRKINFDEQNSEIFWDNSWK

Sequences:

>Translated_187_residues
MKKSLVYTKTGDKGTTSLVGGSRVPKTHIRLEAYGTIDELNSHLGWLNTYLLDEADRDFILSIQHKLFSIGSHLATDQEK
TQLKAASILTPEDVERIEREIDKLDEQLPELCAFIIPGGSRGAAVCHVCRTICRRAERRILTLSETCTISPEVLAFVNRL
SDYLFVLSRKINFDEQNSEIFWDNSWK
>Mature_187_residues
MKKSLVYTKTGDKGTTSLVGGSRVPKTHIRLEAYGTIDELNSHLGWLNTYLLDEADRDFILSIQHKLFSIGSHLATDQEK
TQLKAASILTPEDVERIEREIDKLDEQLPELCAFIIPGGSRGAAVCHVCRTICRRAERRILTLSETCTISPEVLAFVNRL
SDYLFVLSRKINFDEQNSEIFWDNSWK

Specific function: Unknown

COG id: COG2096

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI16418349, Length=191, Percent_Identity=41.3612565445026, Blast_Score=123, Evalue=9e-29,
Organism=Caenorhabditis elegans, GI115534154, Length=181, Percent_Identity=35.3591160220994, Blast_Score=94, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017858
- InterPro:   IPR002779
- InterPro:   IPR016030
- ProDom:   PD007457 [H]

Pfam domain/function: PF01923 Cob_adeno_trans [H]

EC number: =2.5.1.17 [H]

Molecular weight: Translated: 21243; Mature: 21243

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLVYTKTGDKGTTSLVGGSRVPKTHIRLEAYGTIDELNSHLGWLNTYLLDEADRDFI
CCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHH
LSIQHKLFSIGSHLATDQEKTQLKAASILTPEDVERIEREIDKLDEQLPELCAFIIPGGS
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RGAAVCHVCRTICRRAERRILTLSETCTISPEVLAFVNRLSDYLFVLSRKINFDEQNSEI
CHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
FWDNSWK
ECCCCCC
>Mature Secondary Structure
MKKSLVYTKTGDKGTTSLVGGSRVPKTHIRLEAYGTIDELNSHLGWLNTYLLDEADRDFI
CCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHH
LSIQHKLFSIGSHLATDQEKTQLKAASILTPEDVERIEREIDKLDEQLPELCAFIIPGGS
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RGAAVCHVCRTICRRAERRILTLSETCTISPEVLAFVNRLSDYLFVLSRKINFDEQNSEI
CHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
FWDNSWK
ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]