| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is fusA [H]
Identifier: 29348138
GI number: 29348138
Start: 3378768
End: 3380885
Strand: Reverse
Name: fusA [H]
Synonym: BT_2729
Alternate gene names: 29348138
Gene position: 3380885-3378768 (Counterclockwise)
Preceding gene: 29348139
Following gene: 29348137
Centisome position: 54.0
GC content: 41.6
Gene sequence:
>2118_bases ATGGCAAAGACAGATTTACATTTGACTCGTAATATCGGTATCATGGCTCACATTGATGCCGGAAAAACAACAACTTCTGA ACGTATCCTGTTCTACACTGGATTGACTCACAAAATTGGTGAGGTACACGATGGTGCTGCAACAATGGACTGGATGGAAC AGGAGCAAGAACGTGGTATTACTATTACATCTGCTGCAACAACAACAAGATGGAAATATGCTGGTGATACTTATAAAATC AACTTGATTGACACTCCGGGACACGTTGACTTTACTGCTGAAGTAGAACGTTCGTTACGTATTCTGGATGGTGCTGTGGC TGCTTACTGTGCAGTAGGTGGTGTAGAGCCTCAATCAGAAACTGTATGGCGTCAAGCTGATAAGTATAATGTGCCACGTA TTGCGTACGTAAACAAAATGGACCGTTCGGGTGCTGACTTCTTTGAGGTTGTACGCCAGATGAAAGCTGTTTTGGGTGCT AATCCTTGTCCAATCGTTGTTCCTATTGGCGCTGAGGAAACCTTCAAAGGTCTAGTAGACTTGATTAAAATGAAAGCTAT CTATTGGCATGATGAAACAATGGGGGCTGACTATACAGTTGAAGAAATACCGGCAGATCTCGTTGATGAAGCAAATGAAT GGAGAGATAAAATGCTTGAAAAGGTAGCTGAGTTTGACGATGCTTTGATGGAGAAATATTTCGACGATCCTTCTACTATT ACAGAAGAAGAAGTGTTGAGAGCTCTTCGCAATGCAACAGTTCAGATGGCAGTTGTACCAATGTTGTGTGGCTCTTCATT TAAGAATAAGGGTGTTCAGACATTGTTGGACTATGTTTGTGCTTTCTTGCCTTCTCCATTGGATACTGAGAATGTGATTG GTACAAATCCGAATACAGGTGCAGAAGAAGATCGTAAACCGAGTGATGATGAGAAAACATCAGCTTTGGCATTTAAGATT GCTACTGACCCTTATGTAGGTCGTTTGACTTTCTTCCGTGTATATTCGGGTAAGATTGAAGCTGGTTCTTATATCTATAA TTCTCGCTCTGGTAAGAAAGAACGTGTTTCTCGTCTGTTCCAGATGCATTCAAACAAGCAGAATCCGGTTGAAGTAATCG GTGCTGGTGATATTGGTGCAGGTGTAGGTTTTAAAGATATTCATACTGGTGATACGCTTTGTGATGAAACAGCTCCGATC GTATTAGAGTCTATGGACTTCCCAGAACCGGTAATCGGTATTGCAGTTGAGCCTAAAACTCAGAAAGACATGGATAAATT GTCTAACGGTTTGGCTAAGCTCGCTGAAGAAGATCCGACATTTACAGTTAAGACTGATGAGCAAACAGGACAGACTGTAA TCTCTGGTATGGGTGAGTTGCACTTGGATATCATTATTGACCGTTTGAAACGTGAATTTAAAGTAGAATGTAACCAAGGT AAACCTCAGGTTAATTATAAGGAAGCTATCACTAAGACAGTTGATCTTCGTGAAGTTTATAAGAAACAGTCTGGTGGTCG TGGTAAGTTTGCAGATATTATTGTTAAGATCGGTCCTGTTGATGAAGATTTCAAAGAAGGCGGATTGCAGTTTATCGATG AAGTGAAGGGTGGTAATATTCCTAAAGAATTTATTCCTTCAGTTCAGAAAGGTTTCACAAGCGCAATGAAGAACGGTGTG TTGGCCGGATATCCGTTGGATTCAATGAAAGTAACTTTGATTGATGGTTCATTCCACCCGGTTGACTCTGACCAGTTGTC TTTCGAAATCTGTGCTATTCAGGCATATAAGAATGCATGTGCTAAAGCAGGTCCGGTATTGATGGAGCCTATCATGAAAC TGGAGGTTGTTACTCCGGAAGAAAACATGGGTGATGTGATCGGTGACTTGAATAAGCGTCGTGGCCAGGTTGAAGGTATG GAATCTAGCCGTTCCGGTGCTCGTATCGTGAAAGCAATGGTGCCACTGGCTGAAATGTTTGGTTATGTAACAGCGTTACG TACTATTACATCAGGTCGCGCAACTTCATCAATGGTATATTCTCATCACGCTCAAGTTTCTAACTCTATTGCTAAGGCAG TATTGGAAGAAGTTAAAGGACGTGCTGATTTACTCTAG
Upstream 100 bases:
>100_bases AGAATGGCTGAAGCTAACCGTGCATTTGCCCATTTCAGATTCTAATACTATAAGAATATAACCGATTTAGATTAAAAACT TAAAGTAAAGGAATAAGAAA
Downstream 100 bases:
>100_bases AAGAATATCAAAAGCAGCAGGCTAGCGAATGACTCTTAGCCTGCCGCTTTATCTTATTTATAAATATATTAATTTAAAAC CATAATGAGTCAGAAAATTA
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 705; Mature: 704
Protein sequence:
>705_residues MAKTDLHLTRNIGIMAHIDAGKTTTSERILFYTGLTHKIGEVHDGAATMDWMEQEQERGITITSAATTTRWKYAGDTYKI NLIDTPGHVDFTAEVERSLRILDGAVAAYCAVGGVEPQSETVWRQADKYNVPRIAYVNKMDRSGADFFEVVRQMKAVLGA NPCPIVVPIGAEETFKGLVDLIKMKAIYWHDETMGADYTVEEIPADLVDEANEWRDKMLEKVAEFDDALMEKYFDDPSTI TEEEVLRALRNATVQMAVVPMLCGSSFKNKGVQTLLDYVCAFLPSPLDTENVIGTNPNTGAEEDRKPSDDEKTSALAFKI ATDPYVGRLTFFRVYSGKIEAGSYIYNSRSGKKERVSRLFQMHSNKQNPVEVIGAGDIGAGVGFKDIHTGDTLCDETAPI VLESMDFPEPVIGIAVEPKTQKDMDKLSNGLAKLAEEDPTFTVKTDEQTGQTVISGMGELHLDIIIDRLKREFKVECNQG KPQVNYKEAITKTVDLREVYKKQSGGRGKFADIIVKIGPVDEDFKEGGLQFIDEVKGGNIPKEFIPSVQKGFTSAMKNGV LAGYPLDSMKVTLIDGSFHPVDSDQLSFEICAIQAYKNACAKAGPVLMEPIMKLEVVTPEENMGDVIGDLNKRRGQVEGM ESSRSGARIVKAMVPLAEMFGYVTALRTITSGRATSSMVYSHHAQVSNSIAKAVLEEVKGRADLL
Sequences:
>Translated_705_residues MAKTDLHLTRNIGIMAHIDAGKTTTSERILFYTGLTHKIGEVHDGAATMDWMEQEQERGITITSAATTTRWKYAGDTYKI NLIDTPGHVDFTAEVERSLRILDGAVAAYCAVGGVEPQSETVWRQADKYNVPRIAYVNKMDRSGADFFEVVRQMKAVLGA NPCPIVVPIGAEETFKGLVDLIKMKAIYWHDETMGADYTVEEIPADLVDEANEWRDKMLEKVAEFDDALMEKYFDDPSTI TEEEVLRALRNATVQMAVVPMLCGSSFKNKGVQTLLDYVCAFLPSPLDTENVIGTNPNTGAEEDRKPSDDEKTSALAFKI ATDPYVGRLTFFRVYSGKIEAGSYIYNSRSGKKERVSRLFQMHSNKQNPVEVIGAGDIGAGVGFKDIHTGDTLCDETAPI VLESMDFPEPVIGIAVEPKTQKDMDKLSNGLAKLAEEDPTFTVKTDEQTGQTVISGMGELHLDIIIDRLKREFKVECNQG KPQVNYKEAITKTVDLREVYKKQSGGRGKFADIIVKIGPVDEDFKEGGLQFIDEVKGGNIPKEFIPSVQKGFTSAMKNGV LAGYPLDSMKVTLIDGSFHPVDSDQLSFEICAIQAYKNACAKAGPVLMEPIMKLEVVTPEENMGDVIGDLNKRRGQVEGM ESSRSGARIVKAMVPLAEMFGYVTALRTITSGRATSSMVYSHHAQVSNSIAKAVLEEVKGRADLL >Mature_704_residues AKTDLHLTRNIGIMAHIDAGKTTTSERILFYTGLTHKIGEVHDGAATMDWMEQEQERGITITSAATTTRWKYAGDTYKIN LIDTPGHVDFTAEVERSLRILDGAVAAYCAVGGVEPQSETVWRQADKYNVPRIAYVNKMDRSGADFFEVVRQMKAVLGAN PCPIVVPIGAEETFKGLVDLIKMKAIYWHDETMGADYTVEEIPADLVDEANEWRDKMLEKVAEFDDALMEKYFDDPSTIT EEEVLRALRNATVQMAVVPMLCGSSFKNKGVQTLLDYVCAFLPSPLDTENVIGTNPNTGAEEDRKPSDDEKTSALAFKIA TDPYVGRLTFFRVYSGKIEAGSYIYNSRSGKKERVSRLFQMHSNKQNPVEVIGAGDIGAGVGFKDIHTGDTLCDETAPIV LESMDFPEPVIGIAVEPKTQKDMDKLSNGLAKLAEEDPTFTVKTDEQTGQTVISGMGELHLDIIIDRLKREFKVECNQGK PQVNYKEAITKTVDLREVYKKQSGGRGKFADIIVKIGPVDEDFKEGGLQFIDEVKGGNIPKEFIPSVQKGFTSAMKNGVL AGYPLDSMKVTLIDGSFHPVDSDQLSFEICAIQAYKNACAKAGPVLMEPIMKLEVVTPEENMGDVIGDLNKRRGQVEGME SSRSGARIVKAMVPLAEMFGYVTALRTITSGRATSSMVYSHHAQVSNSIAKAVLEEVKGRADLL
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=687, Percent_Identity=43.8136826783115, Blast_Score=535, Evalue=1e-152, Organism=Homo sapiens, GI19923640, Length=718, Percent_Identity=37.883008356546, Blast_Score=454, Evalue=1e-127, Organism=Homo sapiens, GI25306287, Length=718, Percent_Identity=34.1225626740947, Blast_Score=374, Evalue=1e-103, Organism=Homo sapiens, GI25306283, Length=456, Percent_Identity=41.0087719298246, Blast_Score=313, Evalue=3e-85, Organism=Homo sapiens, GI4503483, Length=482, Percent_Identity=26.3485477178423, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI94966754, Length=133, Percent_Identity=41.3533834586466, Blast_Score=106, Evalue=8e-23, Organism=Homo sapiens, GI157426893, Length=158, Percent_Identity=34.1772151898734, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI310132016, Length=117, Percent_Identity=41.025641025641, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI310110807, Length=117, Percent_Identity=41.025641025641, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI310123363, Length=117, Percent_Identity=41.025641025641, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI94966752, Length=95, Percent_Identity=40, Blast_Score=76, Evalue=1e-13, Organism=Escherichia coli, GI1789738, Length=704, Percent_Identity=57.1022727272727, Blast_Score=812, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=498, Percent_Identity=28.1124497991968, Blast_Score=145, Evalue=1e-35, Organism=Escherichia coli, GI1788922, Length=177, Percent_Identity=37.2881355932203, Blast_Score=103, Evalue=5e-23, Organism=Escherichia coli, GI48994988, Length=136, Percent_Identity=39.7058823529412, Blast_Score=101, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17533571, Length=684, Percent_Identity=40.4970760233918, Blast_Score=499, Evalue=1e-141, Organism=Caenorhabditis elegans, GI17556745, Length=710, Percent_Identity=27.4647887323944, Blast_Score=280, Evalue=2e-75, Organism=Caenorhabditis elegans, GI17506493, Length=813, Percent_Identity=26.5682656826568, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17557151, Length=154, Percent_Identity=41.5584415584416, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71988819, Length=159, Percent_Identity=30.8176100628931, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71988811, Length=159, Percent_Identity=30.8176100628931, Blast_Score=74, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323098, Length=695, Percent_Identity=40, Blast_Score=526, Evalue=1e-150, Organism=Saccharomyces cerevisiae, GI6322359, Length=802, Percent_Identity=32.2942643391521, Blast_Score=398, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6324707, Length=489, Percent_Identity=26.7893660531697, Blast_Score=120, Evalue=8e-28, Organism=Saccharomyces cerevisiae, GI6320593, Length=489, Percent_Identity=26.7893660531697, Blast_Score=120, Evalue=8e-28, Organism=Saccharomyces cerevisiae, GI6323320, Length=147, Percent_Identity=36.734693877551, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6324166, Length=179, Percent_Identity=31.2849162011173, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24582462, Length=689, Percent_Identity=42.9608127721335, Blast_Score=530, Evalue=1e-150, Organism=Drosophila melanogaster, GI221458488, Length=728, Percent_Identity=32.6923076923077, Blast_Score=373, Evalue=1e-103, Organism=Drosophila melanogaster, GI24585711, Length=495, Percent_Identity=26.6666666666667, Blast_Score=119, Evalue=6e-27, Organism=Drosophila melanogaster, GI24585713, Length=495, Percent_Identity=26.6666666666667, Blast_Score=119, Evalue=6e-27, Organism=Drosophila melanogaster, GI24585709, Length=495, Percent_Identity=26.6666666666667, Blast_Score=119, Evalue=8e-27, Organism=Drosophila melanogaster, GI78706572, Length=153, Percent_Identity=36.6013071895425, Blast_Score=105, Evalue=8e-23, Organism=Drosophila melanogaster, GI28574573, Length=167, Percent_Identity=34.1317365269461, Blast_Score=92, Evalue=1e-18,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 77588; Mature: 77457
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTDLHLTRNIGIMAHIDAGKTTTSERILFYTGLTHKIGEVHDGAATMDWMEQEQERGI CCCCCEEEEECCCEEEEECCCCCCCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHHHCCE TITSAATTTRWKYAGDTYKINLIDTPGHVDFTAEVERSLRILDGAVAAYCAVGGVEPQSE EEEECCCCCEEEECCCEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHH TVWRQADKYNVPRIAYVNKMDRSGADFFEVVRQMKAVLGANPCPIVVPIGAEETFKGLVD HHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHH LIKMKAIYWHDETMGADYTVEEIPADLVDEANEWRDKMLEKVAEFDDALMEKYFDDPSTI HHHHHHHEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TEEEVLRALRNATVQMAVVPMLCGSSFKNKGVQTLLDYVCAFLPSPLDTENVIGTNPNTG CHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AEEDRKPSDDEKTSALAFKIATDPYVGRLTFFRVYSGKIEAGSYIYNSRSGKKERVSRLF CCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHHH QMHSNKQNPVEVIGAGDIGAGVGFKDIHTGDTLCDETAPIVLESMDFPEPVIGIAVEPKT HHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCCCCCCEEEEECCCC QKDMDKLSNGLAKLAEEDPTFTVKTDEQTGQTVISGMGELHLDIIIDRLKREFKVECNQG HHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCC KPQVNYKEAITKTVDLREVYKKQSGGRGKFADIIVKIGPVDEDFKEGGLQFIDEVKGGNI CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHCHHHHHHHHCCCCC PKEFIPSVQKGFTSAMKNGVLAGYPLDSMKVTLIDGSFHPVDSDQLSFEICAIQAYKNAC CHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHH AKAGPVLMEPIMKLEVVTPEENMGDVIGDLNKRRGQVEGMESSRSGARIVKAMVPLAEMF HHCCCHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH GYVTALRTITSGRATSSMVYSHHAQVSNSIAKAVLEEVKGRADLL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCC >Mature Secondary Structure AKTDLHLTRNIGIMAHIDAGKTTTSERILFYTGLTHKIGEVHDGAATMDWMEQEQERGI CCCCEEEEECCCEEEEECCCCCCCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHHHCCE TITSAATTTRWKYAGDTYKINLIDTPGHVDFTAEVERSLRILDGAVAAYCAVGGVEPQSE EEEECCCCCEEEECCCEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHH TVWRQADKYNVPRIAYVNKMDRSGADFFEVVRQMKAVLGANPCPIVVPIGAEETFKGLVD HHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHH LIKMKAIYWHDETMGADYTVEEIPADLVDEANEWRDKMLEKVAEFDDALMEKYFDDPSTI HHHHHHHEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TEEEVLRALRNATVQMAVVPMLCGSSFKNKGVQTLLDYVCAFLPSPLDTENVIGTNPNTG CHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AEEDRKPSDDEKTSALAFKIATDPYVGRLTFFRVYSGKIEAGSYIYNSRSGKKERVSRLF CCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHHH QMHSNKQNPVEVIGAGDIGAGVGFKDIHTGDTLCDETAPIVLESMDFPEPVIGIAVEPKT HHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCCCCCCEEEEECCCC QKDMDKLSNGLAKLAEEDPTFTVKTDEQTGQTVISGMGELHLDIIIDRLKREFKVECNQG HHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCC KPQVNYKEAITKTVDLREVYKKQSGGRGKFADIIVKIGPVDEDFKEGGLQFIDEVKGGNI CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHCHHHHHHHHCCCCC PKEFIPSVQKGFTSAMKNGVLAGYPLDSMKVTLIDGSFHPVDSDQLSFEICAIQAYKNAC CHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHH AKAGPVLMEPIMKLEVVTPEENMGDVIGDLNKRRGQVEGMESSRSGARIVKAMVPLAEMF HHCCCHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH GYVTALRTITSGRATSSMVYSHHAQVSNSIAKAVLEEVKGRADLL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA