| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is rpmC [H]
Identifier: 29348128
GI number: 29348128
Start: 3373845
End: 3374042
Strand: Reverse
Name: rpmC [H]
Synonym: BT_2719
Alternate gene names: 29348128
Gene position: 3374042-3373845 (Counterclockwise)
Preceding gene: 29348129
Following gene: 29348127
Centisome position: 53.9
GC content: 32.32
Gene sequence:
>198_bases ATGAAAATTGCAGAAATTAAAGAAATGACTACTAATGATTTAGTAGAAAGAGTAGAGGCAGAAACAGCTAATTATAACCA GATGGTTATCAATCATTCTATTTCTCCTTTGGAAAATCCTGCTCAAATCAAACAATTACGCAGGACTATTGCGCGTATGA AAACAGAATTACGCCAAAGAGAACTTAACAATAAATGA
Upstream 100 bases:
>100_bases CGAAAGAAGCATTGCGCTTAGCTGCTCAAAAGCTTCCTATTACAACGAAGTTTGTCGTAAGACGTGATTATGATATTCAA AATCAAAATGCGTAAGGTTT
Downstream 100 bases:
>100_bases TCAGCTTGATGGAAGCAAGAAATTTAAGAAAAGAAAGAACAGGGGTTGTATTGAGCAACAAGATGGAAAAAACTATCACA GTTGCTGCCAAGTTTAAAGA
Product: 50S ribosomal protein L29
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MKIAEIKEMTTNDLVERVEAETANYNQMVINHSISPLENPAQIKQLRRTIARMKTELRQRELNNK
Sequences:
>Translated_65_residues MKIAEIKEMTTNDLVERVEAETANYNQMVINHSISPLENPAQIKQLRRTIARMKTELRQRELNNK >Mature_65_residues MKIAEIKEMTTNDLVERVEAETANYNQMVINHSISPLENPAQIKQLRRTIARMKTELRQRELNNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L29P family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001854 - InterPro: IPR018254 [H]
Pfam domain/function: PF00831 Ribosomal_L29 [H]
EC number: NA
Molecular weight: Translated: 7652; Mature: 7652
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS00579 RIBOSOMAL_L29
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAEIKEMTTNDLVERVEAETANYNQMVINHSISPLENPAQIKQLRRTIARMKTELRQR CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ELNNK HCCCC >Mature Secondary Structure MKIAEIKEMTTNDLVERVEAETANYNQMVINHSISPLENPAQIKQLRRTIARMKTELRQR CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ELNNK HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA