| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348069
Identifier: 29348069
GI number: 29348069
Start: 3314081
End: 3315421
Strand: Reverse
Name: 29348069
Synonym: BT_2659
Alternate gene names: NA
Gene position: 3315421-3314081 (Counterclockwise)
Preceding gene: 29348070
Following gene: 29348068
Centisome position: 52.96
GC content: 43.03
Gene sequence:
>1341_bases ATGGGCGGTAATGTGACAGTATCTGACCTTGCCGTGTCTCGTTCGGAAGATAAATTGTTCGTATCAATGGATATTGATGT TTCGGCATTGAGTGTAAAAAGTAACCGTGAAGTGATTCTTACGCCTAGACTGTCAGGAGAAGGTAATGAACTGAACTTAC CTTCGGTGATGATAGCTGGTCGCAACCGCTATTATCATCATCTGCGCAATGGCTTGTGTACGGATGATATGATGCTTTAT CAAAAAAGCAAAGTATCTGTGGTCAAATATCGTACAGTGGTACCTTATGCCGATTGGATGAAACGTGCCACGCTCAGTAC GGGCAATGAAACATGCGGTTGTTGCGGCGAGGCACTTGTTGATGGCAACGAGCCTCTGTTGGTGCTTCAGTTGGAGCCGA AAGAATTTGTGCCTGCCTATGTATACATTCGTCCGAAAGCAGAACCAAAAATTAATGTATTGGAAGGTTCGGCTTATATT GACTTTCCTGTGAACCGAACAGAAATCCATGAGAATTATCGTCGTAATCCGGCTGAATTACAAAAGATACTTAATACTAT TGATGCGGTGAAGAATGATGTGGATACACGGATTATCTCTGTCAGCATCAAAGGATATGCTTCGCCTGAAAGTCCCTATT CGAATAATGAACGTCTGGCGATGGGACGAACGAAAACATTGAAAGAGTATGTACGCAAACAGTACGATTTTGCCGATTCA CTATTCATTACCGATAACGAGCCGGAAGATTGGGCAGGACTCGAACGTTATGTGGAAAACTCGTATCTCGAAAACAAAGC AGGTATTCTGGCATTAATCCGCAGTAACCAGGAACCGGATGCAAAAGAACGTAGCATCAAGACTGCCTTTCCAAAAGATT ATGCATTCTTACTGAAAGAGGTTTATCCGGGGCTTCGTCATTCAGACTATGCAGTCAAATATGAAGTGCGTACCTATACT GATATCAACGAAATCAAGCGTCTGATTAAAACACAGCCACAGAAGTTAAGTTTGAATGAGATGTATCTTGCCGCACAGGA TATGAAACTGGGGAGTGAAGAATATAATGAAACATTCGAAGTCGCTGTACGTATGTTCCCTGATGATGAAGTGGCTAATC TGAATGCTGCAAATGCCGCAATGGCTAGGGGGGATATGAAGAATGCGGAATATTATCTGAAGAAAGCTGGAAACTCACCG CAGGCTGTTTATGGTCGGGGGACATACGCTGCCTTGAAGAAGGAGTTTGATATGGCAGAGAAAATGTTTACTGAAGCTGC ACATAGGGGGCTGGCTGATGCAGAGGAGATGTTAAAGCAAATAGAAGAGATAAAACATTAA
Upstream 100 bases:
>100_bases TTAAATCACACAAATTACGGATATGAATAGAACAACAAAAATACTTTGTAGTAGTTTGCTATTCCTACTCTTGATGATAG GAGCAAAGGCTCAAACAATA
Downstream 100 bases:
>100_bases CAGGATCTAAATATAAAAACATAGAAATTATTAATTCATTCAAAGTTGCAGATTATGAAAAGAATTAGCAAGTATTTTTT ATGCCTTTTTGCCGTAGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MGGNVTVSDLAVSRSEDKLFVSMDIDVSALSVKSNREVILTPRLSGEGNELNLPSVMIAGRNRYYHHLRNGLCTDDMMLY QKSKVSVVKYRTVVPYADWMKRATLSTGNETCGCCGEALVDGNEPLLVLQLEPKEFVPAYVYIRPKAEPKINVLEGSAYI DFPVNRTEIHENYRRNPAELQKILNTIDAVKNDVDTRIISVSIKGYASPESPYSNNERLAMGRTKTLKEYVRKQYDFADS LFITDNEPEDWAGLERYVENSYLENKAGILALIRSNQEPDAKERSIKTAFPKDYAFLLKEVYPGLRHSDYAVKYEVRTYT DINEIKRLIKTQPQKLSLNEMYLAAQDMKLGSEEYNETFEVAVRMFPDDEVANLNAANAAMARGDMKNAEYYLKKAGNSP QAVYGRGTYAALKKEFDMAEKMFTEAAHRGLADAEEMLKQIEEIKH
Sequences:
>Translated_446_residues MGGNVTVSDLAVSRSEDKLFVSMDIDVSALSVKSNREVILTPRLSGEGNELNLPSVMIAGRNRYYHHLRNGLCTDDMMLY QKSKVSVVKYRTVVPYADWMKRATLSTGNETCGCCGEALVDGNEPLLVLQLEPKEFVPAYVYIRPKAEPKINVLEGSAYI DFPVNRTEIHENYRRNPAELQKILNTIDAVKNDVDTRIISVSIKGYASPESPYSNNERLAMGRTKTLKEYVRKQYDFADS LFITDNEPEDWAGLERYVENSYLENKAGILALIRSNQEPDAKERSIKTAFPKDYAFLLKEVYPGLRHSDYAVKYEVRTYT DINEIKRLIKTQPQKLSLNEMYLAAQDMKLGSEEYNETFEVAVRMFPDDEVANLNAANAAMARGDMKNAEYYLKKAGNSP QAVYGRGTYAALKKEFDMAEKMFTEAAHRGLADAEEMLKQIEEIKH >Mature_445_residues GGNVTVSDLAVSRSEDKLFVSMDIDVSALSVKSNREVILTPRLSGEGNELNLPSVMIAGRNRYYHHLRNGLCTDDMMLYQ KSKVSVVKYRTVVPYADWMKRATLSTGNETCGCCGEALVDGNEPLLVLQLEPKEFVPAYVYIRPKAEPKINVLEGSAYID FPVNRTEIHENYRRNPAELQKILNTIDAVKNDVDTRIISVSIKGYASPESPYSNNERLAMGRTKTLKEYVRKQYDFADSL FITDNEPEDWAGLERYVENSYLENKAGILALIRSNQEPDAKERSIKTAFPKDYAFLLKEVYPGLRHSDYAVKYEVRTYTD INEIKRLIKTQPQKLSLNEMYLAAQDMKLGSEEYNETFEVAVRMFPDDEVANLNAANAAMARGDMKNAEYYLKKAGNSPQ AVYGRGTYAALKKEFDMAEKMFTEAAHRGLADAEEMLKQIEEIKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50601; Mature: 50470
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGNVTVSDLAVSRSEDKLFVSMDIDVSALSVKSNREVILTPRLSGEGNELNLPSVMIAG CCCCEEEHHEEEECCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEC RNRYYHHLRNGLCTDDMMLYQKSKVSVVKYRTVVPYADWMKRATLSTGNETCGCCGEALV CCHHHHHHHCCCCCCHHHHHHCCCEEEEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHC DGNEPLLVLQLEPKEFVPAYVYIRPKAEPKINVLEGSAYIDFPVNRTEIHENYRRNPAEL CCCCCEEEEEECCHHHCCEEEEEECCCCCCEEEEECCEEEECCCCHHHHHHHHCCCHHHH QKILNTIDAVKNDVDTRIISVSIKGYASPESPYSNNERLAMGRTKTLKEYVRKQYDFADS HHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCE LFITDNEPEDWAGLERYVENSYLENKAGILALIRSNQEPDAKERSIKTAFPKDYAFLLKE EEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCHHHCCCHHHHHHHHH VYPGLRHSDYAVKYEVRTYTDINEIKRLIKTQPQKLSLNEMYLAAQDMKLGSEEYNETFE HCCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCHHHHEEEHHHCCCCCHHHCCEEE VAVRMFPDDEVANLNAANAAMARGDMKNAEYYLKKAGNSPQAVYGRGTYAALKKEFDMAE EEEEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHH KMFTEAAHRGLADAEEMLKQIEEIKH HHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure GGNVTVSDLAVSRSEDKLFVSMDIDVSALSVKSNREVILTPRLSGEGNELNLPSVMIAG CCCEEEHHEEEECCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEC RNRYYHHLRNGLCTDDMMLYQKSKVSVVKYRTVVPYADWMKRATLSTGNETCGCCGEALV CCHHHHHHHCCCCCCHHHHHHCCCEEEEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHC DGNEPLLVLQLEPKEFVPAYVYIRPKAEPKINVLEGSAYIDFPVNRTEIHENYRRNPAEL CCCCCEEEEEECCHHHCCEEEEEECCCCCCEEEEECCEEEECCCCHHHHHHHHCCCHHHH QKILNTIDAVKNDVDTRIISVSIKGYASPESPYSNNERLAMGRTKTLKEYVRKQYDFADS HHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCE LFITDNEPEDWAGLERYVENSYLENKAGILALIRSNQEPDAKERSIKTAFPKDYAFLLKE EEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCHHHCCCHHHHHHHHH VYPGLRHSDYAVKYEVRTYTDINEIKRLIKTQPQKLSLNEMYLAAQDMKLGSEEYNETFE HCCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCHHHHEEEHHHCCCCCHHHCCEEE VAVRMFPDDEVANLNAANAAMARGDMKNAEYYLKKAGNSPQAVYGRGTYAALKKEFDMAE EEEEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHH KMFTEAAHRGLADAEEMLKQIEEIKH HHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA