Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348037

Identifier: 29348037

GI number: 29348037

Start: 3276144

End: 3277448

Strand: Reverse

Name: 29348037

Synonym: BT_2627

Alternate gene names: NA

Gene position: 3277448-3276144 (Counterclockwise)

Preceding gene: 29348038

Following gene: 29348036

Centisome position: 52.35

GC content: 35.56

Gene sequence:

>1305_bases
ATGACAATAATAAAATATATAAAGTTTGTAGTTATAATTGTAATTGTTACAATTGTTTTTTCCTGTTCTAAGAATGAGGC
GGGAAATTCAGAATATGATCCTTCTCTTCCTATTTCTTTAACAGATTTTTTCCCAATACAAGGGGGAATGGCGACTAGAA
TGGTTATTGAGGGAGCTAATTTTGGAACAGATCTCTCACAAATCAAGGTATTTTTTAACCAAAAAGAGGCGTCAATTCTA
AATGTGAAAAATAGTATTATTTATTTGCTTGTTCCTAAACTTCCTGGTAACGATTGTATAGTTACTGTAAAAGTTGGCAA
TCAAGAGGCTAGGTTTACACGTAATTTTCAATATATAGAGAACTATTCTGTTACTACTATTGCTGGGCAACCTGGAACCA
ATTTATTTGTGGAAGGGACCTTGGCTGCAGCACAATTTGGTCCCGTGCAACATCTTGCAATTGATGATGAAAATAATCTC
TTTATTACGGAACGAAATGGTAGTGATGGTAAAGGAACTTGTTCTGTATTGAATGAAGAGAGTGGTACAGTAACTTTTTT
GTTTAAAGCGTCAGACAATTTGAATGTACCAACTGTCAATGCTCAGACGCAGAATGTATATATACCTTTAGACGGAGGAT
ATACTTTCTATGAATTGAATCCTGTAAATCAATGGATTGCTAAGAGTCGTTTGGTACTTCATCCTTCCAAAGAACAGCAA
GAGGCAGGAATGGATGATTTTGAAATAAATTGGAAACATTCTTTGGCTTTTTCTAGATATGATAATATGATTTATACTCG
TTCTTATGGAGGGGATTTAATAAAGGTAGACCCAGAAACAAGAGTAGGGCAAAAGATCGGCAACTTTTTTCCTAATACAG
ATAGTTTTATTGTTGCTCATCCAACACAACCGGAGATTTTATATATAGCTTATGCAGCTAAACATGTTATTTATACTTAC
AATATAGAGACTGGAGAACACAAATTGTTTGCTGGGGCTTTTGGACAATCAGGTTGGAACGATGGAATTGCAACTGATGC
AGAATTTAATTCTCCTCGTCAAATGTCATTAGACATGGAAGGCAACATCTATATAGCTGATAGTGGTAATCACTGTATTA
GAATGATAGATAAAAATGGTATAGTGACGACTCCTATTGGACAACCTGGAGAGGCAGGTTATGCAGATGGTAGCCCAGAT
ATGGCTTTGTTGAACGATCCTAGAGGGGTAGCTGTGAATTCAGAAGGAGATGTGTATATTGCAGATTTAGGGAATCGCTG
TATACGTAAACTTACACTTCAATAA

Upstream 100 bases:

>100_bases
TAAAATGCTTATGAATATTATAGAAAGACATCCACCATGATTAATGATATCCGCTGTTTAATCATATAATAGAAACTAAT
CAAATATAAAGAATATAGAA

Downstream 100 bases:

>100_bases
TTATGGTATAAACAAAAGAATAAGAATATAAAGATGAAAGTGAAATATGCATTAGTGCTATTATCTTTATTGATAAGTAG
TATGGAATTGTTCGCACAAG

Product: cell surface protein

Products: NA

Alternate protein names: NHL Repeat Containing Protein; Serine/Threonine Protein Kinase; IPT/TIG Domain-Containing Protein; IPT/TIG Domain Protein; YD Repeat Protein; Protein Serine/Threonine Kinase; Cell Surface Protein; SMP-30/Gluconolaconase/LRE Domain-Containing Protein; Copper Amine Oxidase Domain Protein; Immunoglobulin I-Set Domain-Containing Protein; Ascorbate-Dependent Monooxygenase; Leucine-Rich Repeat-Containing Protein; YD Repeat-Containing Protein; Lipoprotein; Ig Domain-Containing Protein

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MTIIKYIKFVVIIVIVTIVFSCSKNEAGNSEYDPSLPISLTDFFPIQGGMATRMVIEGANFGTDLSQIKVFFNQKEASIL
NVKNSIIYLLVPKLPGNDCIVTVKVGNQEARFTRNFQYIENYSVTTIAGQPGTNLFVEGTLAAAQFGPVQHLAIDDENNL
FITERNGSDGKGTCSVLNEESGTVTFLFKASDNLNVPTVNAQTQNVYIPLDGGYTFYELNPVNQWIAKSRLVLHPSKEQQ
EAGMDDFEINWKHSLAFSRYDNMIYTRSYGGDLIKVDPETRVGQKIGNFFPNTDSFIVAHPTQPEILYIAYAAKHVIYTY
NIETGEHKLFAGAFGQSGWNDGIATDAEFNSPRQMSLDMEGNIYIADSGNHCIRMIDKNGIVTTPIGQPGEAGYADGSPD
MALLNDPRGVAVNSEGDVYIADLGNRCIRKLTLQ

Sequences:

>Translated_434_residues
MTIIKYIKFVVIIVIVTIVFSCSKNEAGNSEYDPSLPISLTDFFPIQGGMATRMVIEGANFGTDLSQIKVFFNQKEASIL
NVKNSIIYLLVPKLPGNDCIVTVKVGNQEARFTRNFQYIENYSVTTIAGQPGTNLFVEGTLAAAQFGPVQHLAIDDENNL
FITERNGSDGKGTCSVLNEESGTVTFLFKASDNLNVPTVNAQTQNVYIPLDGGYTFYELNPVNQWIAKSRLVLHPSKEQQ
EAGMDDFEINWKHSLAFSRYDNMIYTRSYGGDLIKVDPETRVGQKIGNFFPNTDSFIVAHPTQPEILYIAYAAKHVIYTY
NIETGEHKLFAGAFGQSGWNDGIATDAEFNSPRQMSLDMEGNIYIADSGNHCIRMIDKNGIVTTPIGQPGEAGYADGSPD
MALLNDPRGVAVNSEGDVYIADLGNRCIRKLTLQ
>Mature_433_residues
TIIKYIKFVVIIVIVTIVFSCSKNEAGNSEYDPSLPISLTDFFPIQGGMATRMVIEGANFGTDLSQIKVFFNQKEASILN
VKNSIIYLLVPKLPGNDCIVTVKVGNQEARFTRNFQYIENYSVTTIAGQPGTNLFVEGTLAAAQFGPVQHLAIDDENNLF
ITERNGSDGKGTCSVLNEESGTVTFLFKASDNLNVPTVNAQTQNVYIPLDGGYTFYELNPVNQWIAKSRLVLHPSKEQQE
AGMDDFEINWKHSLAFSRYDNMIYTRSYGGDLIKVDPETRVGQKIGNFFPNTDSFIVAHPTQPEILYIAYAAKHVIYTYN
IETGEHKLFAGAFGQSGWNDGIATDAEFNSPRQMSLDMEGNIYIADSGNHCIRMIDKNGIVTTPIGQPGEAGYADGSPDM
ALLNDPRGVAVNSEGDVYIADLGNRCIRKLTLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47861; Mature: 47729

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51125 NHL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIIKYIKFVVIIVIVTIVFSCSKNEAGNSEYDPSLPISLTDFFPIQGGMATRMVIEGAN
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCC
FGTDLSQIKVFFNQKEASILNVKNSIIYLLVPKLPGNDCIVTVKVGNQEARFTRNFQYIE
CCCCHHHEEEEECCCCCEEEEECCCEEEEEEECCCCCCEEEEEEECCCCCEEEECEEEEC
NYSVTTIAGQPGTNLFVEGTLAAAQFGPVQHLAIDDENNLFITERNGSDGKGTCSVLNEE
CCEEEEEECCCCCEEEEEEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCEEEEEEECC
SGTVTFLFKASDNLNVPTVNAQTQNVYIPLDGGYTFYELNPVNQWIAKSRLVLHPSKEQQ
CCEEEEEEECCCCCCCCEECCCCCEEEEEECCCEEEEEECCHHHHHHCCEEEECCCCHHH
EAGMDDFEINWKHSLAFSRYDNMIYTRSYGGDLIKVDPETRVGQKIGNFFPNTDSFIVAH
HCCCCCEEEEEEEEEEEECCCCEEEEEECCCCEEEECCCHHHHHHHHCCCCCCCCEEEEC
PTQPEILYIAYAAKHVIYTYNIETGEHKLFAGAFGQSGWNDGIATDAEFNSPRQMSLDME
CCCCCEEEEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECC
GNIYIADSGNHCIRMIDKNGIVTTPIGQPGEAGYADGSPDMALLNDPRGVAVNSEGDVYI
CCEEEEECCCEEEEEEECCCEEECCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCEEE
ADLGNRCIRKLTLQ
EECCCHHHHHHCCC
>Mature Secondary Structure 
TIIKYIKFVVIIVIVTIVFSCSKNEAGNSEYDPSLPISLTDFFPIQGGMATRMVIEGAN
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCC
FGTDLSQIKVFFNQKEASILNVKNSIIYLLVPKLPGNDCIVTVKVGNQEARFTRNFQYIE
CCCCHHHEEEEECCCCCEEEEECCCEEEEEEECCCCCCEEEEEEECCCCCEEEECEEEEC
NYSVTTIAGQPGTNLFVEGTLAAAQFGPVQHLAIDDENNLFITERNGSDGKGTCSVLNEE
CCEEEEEECCCCCEEEEEEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCEEEEEEECC
SGTVTFLFKASDNLNVPTVNAQTQNVYIPLDGGYTFYELNPVNQWIAKSRLVLHPSKEQQ
CCEEEEEEECCCCCCCCEECCCCCEEEEEECCCEEEEEECCHHHHHHCCEEEECCCCHHH
EAGMDDFEINWKHSLAFSRYDNMIYTRSYGGDLIKVDPETRVGQKIGNFFPNTDSFIVAH
HCCCCCEEEEEEEEEEEECCCCEEEEEECCCCEEEECCCHHHHHHHHCCCCCCCCEEEEC
PTQPEILYIAYAAKHVIYTYNIETGEHKLFAGAFGQSGWNDGIATDAEFNSPRQMSLDME
CCCCCEEEEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECC
GNIYIADSGNHCIRMIDKNGIVTTPIGQPGEAGYADGSPDMALLNDPRGVAVNSEGDVYI
CCEEEEECCCEEEEEEECCCEEECCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCEEE
ADLGNRCIRKLTLQ
EECCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA