| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29348019
Identifier: 29348019
GI number: 29348019
Start: 3249310
End: 3250068
Strand: Reverse
Name: 29348019
Synonym: BT_2609
Alternate gene names: NA
Gene position: 3250068-3249310 (Counterclockwise)
Preceding gene: 29348025
Following gene: 29348018
Centisome position: 51.92
GC content: 48.22
Gene sequence:
>759_bases ATGAAGAAGGAACCTTTATTTGTAGCCCTCAGCAATCAGAAGGGCGGAGTCGGTAAATCAACGTTAACCGTGTTGCTTGC CAGCTATTTCCATTACCATAAGGCAAAGAACGTGCTTGTGGTAGATTGTGACTACCCCCAGCACAGCATGATGACTTTGC GTGAATGGGACATAAAAAATGTGGAAAAGACCCCTCGTCTGCAAAGTTTGCTGGTGGAGCAGTTTGGGGATACGGGCAGA AAGGCCTACAATATCCTGGCTTCCATGCCCGAACAAGCCAAGGAAACTGCCTATGGTTTTATAGACCGTTCCGATACCGA ATATGACCTTGTCCTTTTGGACCTTCCCGGAACGGTCAATACCACAGGCGTTTTCCAGTCCATCATCAATATGGACTATG TTTTTACCCCGATCACCCAGGAGAGGATGGTCATGCAGAGCAGCATGTCATTTGTCCTGTCCATCCGGGAATATCTGCTT CATCACAAGGGAGTCCCCTTGCGTGATATCCATATGTTCTGGAATAAAATGGACAAGCGCGTCTCCAGGGACTTGTATGA CGCTTATATGGAAATCATCCGTTCTTTGGGATTACCTGTATTGAATACGGTCCTTCCGGCTGCGGAGCGTTATAAAAAGG ATGTCGGTTTGAACGGGCAGATATTCCGCAGCACCCTGTTTCCGCCTTCCGCCGCCGCTCTGAAAGGAAGCAACTTCGAT CTGCTTGCCGCTGAAATGGAAACCATACTCGGACTTTAA
Upstream 100 bases:
>100_bases CAGCCGTATTCATGCTGCCGTATAGTATTGTGCGGCGTCACTTGATGTAAGGATACAGGCGAAAAGAAAATAAGTCATTA ACCCTTAATTTCATGAAGTT
Downstream 100 bases:
>100_bases CCGGACATGACTATGGCAAACAAGAACAGATCCGTCTATAATGTGGACGAGGACGCGCTCAAGCGTATGGTAGCCGGAGA TACAACGGCCTTGGAAAAGA
Product: conjugate transposon protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MKKEPLFVALSNQKGGVGKSTLTVLLASYFHYHKAKNVLVVDCDYPQHSMMTLREWDIKNVEKTPRLQSLLVEQFGDTGR KAYNILASMPEQAKETAYGFIDRSDTEYDLVLLDLPGTVNTTGVFQSIINMDYVFTPITQERMVMQSSMSFVLSIREYLL HHKGVPLRDIHMFWNKMDKRVSRDLYDAYMEIIRSLGLPVLNTVLPAAERYKKDVGLNGQIFRSTLFPPSAAALKGSNFD LLAAEMETILGL
Sequences:
>Translated_252_residues MKKEPLFVALSNQKGGVGKSTLTVLLASYFHYHKAKNVLVVDCDYPQHSMMTLREWDIKNVEKTPRLQSLLVEQFGDTGR KAYNILASMPEQAKETAYGFIDRSDTEYDLVLLDLPGTVNTTGVFQSIINMDYVFTPITQERMVMQSSMSFVLSIREYLL HHKGVPLRDIHMFWNKMDKRVSRDLYDAYMEIIRSLGLPVLNTVLPAAERYKKDVGLNGQIFRSTLFPPSAAALKGSNFD LLAAEMETILGL >Mature_252_residues MKKEPLFVALSNQKGGVGKSTLTVLLASYFHYHKAKNVLVVDCDYPQHSMMTLREWDIKNVEKTPRLQSLLVEQFGDTGR KAYNILASMPEQAKETAYGFIDRSDTEYDLVLLDLPGTVNTTGVFQSIINMDYVFTPITQERMVMQSSMSFVLSIREYLL HHKGVPLRDIHMFWNKMDKRVSRDLYDAYMEIIRSLGLPVLNTVLPAAERYKKDVGLNGQIFRSTLFPPSAAALKGSNFD LLAAEMETILGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28609; Mature: 28609
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKEPLFVALSNQKGGVGKSTLTVLLASYFHYHKAKNVLVVDCDYPQHSMMTLREWDIKN CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCC VEKTPRLQSLLVEQFGDTGRKAYNILASMPEQAKETAYGFIDRSDTEYDLVLLDLPGTVN CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCC TTGVFQSIINMDYVFTPITQERMVMQSSMSFVLSIREYLLHHKGVPLRDIHMFWNKMDKR HHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VSRDLYDAYMEIIRSLGLPVLNTVLPAAERYKKDVGLNGQIFRSTLFPPSAAALKGSNFD HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHCCCCCCH LLAAEMETILGL HHHHHHHHHHCC >Mature Secondary Structure MKKEPLFVALSNQKGGVGKSTLTVLLASYFHYHKAKNVLVVDCDYPQHSMMTLREWDIKN CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCC VEKTPRLQSLLVEQFGDTGRKAYNILASMPEQAKETAYGFIDRSDTEYDLVLLDLPGTVN CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCC TTGVFQSIINMDYVFTPITQERMVMQSSMSFVLSIREYLLHHKGVPLRDIHMFWNKMDKR HHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VSRDLYDAYMEIIRSLGLPVLNTVLPAAERYKKDVGLNGQIFRSTLFPPSAAALKGSNFD HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHCCCCCCH LLAAEMETILGL HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA