Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29348008

Identifier: 29348008

GI number: 29348008

Start: 3238347

End: 3238970

Strand: Reverse

Name: 29348008

Synonym: BT_2598

Alternate gene names: NA

Gene position: 3238970-3238347 (Counterclockwise)

Preceding gene: 29348009

Following gene: 29348007

Centisome position: 51.74

GC content: 53.21

Gene sequence:

>624_bases
ATGGAATTCAAGTCATTGACCAATATTGAAAGCAGCTTCAGGCGTATCCGCCTGATGCTGGCAGCCTTTGTATGCTGCTG
TACGCTCATTACCGGCTATTCGTTGTGGAGCTCCTACAGCTTTGCCGAGAAGCAGCGTGAAAAGATCTATGTGCTGGACG
GCGGCAAGTCGCTGATGCTTGCGCTCTCGCAGGACCTTTCCCAGAACCGTCCGGCGGAAGCCAGGGAGCATGTGAGGCGC
TTCCATGAACTCTTCTTCAGCCTTTCACCGCAGAAGGACGCCATCGAGCACAATATCCACCGGGCTCTGCTGCTGGCCGA
CAAGAGTGCCTACCATTATTATGTGGACCTTGCCGAGAAAGGGTATTACAACCGCCTGATTTCGGGTAACATCAACCAGG
TTGTCCAGGTGGACAGTGTGGCCTGCGACTTCAACAGTTATCCCTATAAGGCGAGGACGTATGCCCGGCAGATGATCATC
CGTGAGAGCAATGTGACGGAACGCAGCCTGGTGACGGAGTGCCGGCTTCAGAATGCTGTCAGGTCGGATGACAATCCGAA
CGGGTTCATTATCGAGCATTTTACCATTACGGAAAACAGGGATTTAAGGAGTGCCAACCGATGA

Upstream 100 bases:

>100_bases
GACTAAAGCCGGTGGTTTCACTGCCGGTGCCGGCGGTGCGGCACTGGGTAATATCGGAGGGCGTATACGTGGAAAATAAA
CAATCAAAAACGATTCACAG

Downstream 100 bases:

>100_bases
GAAGAAGAAAATACCCGTGGAAACAGGCGGATATTCTGATACACCGATACTGCCGCAGACTGACGACAGGGCAGCGGTTG
GCTGTCATCGCCGTTGCATT

Product: conjugate transposon protein

Products: NA

Alternate protein names: Plasmid Transfer Protein; Conjugate Transposon Protein; F Pilus Assembly Protein TraK; Conjugate Transposon Protein TraK; Transposon TraK Protein; Conserved Protein Found In Conjugate Transposon TraK

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MEFKSLTNIESSFRRIRLMLAAFVCCCTLITGYSLWSSYSFAEKQREKIYVLDGGKSLMLALSQDLSQNRPAEAREHVRR
FHELFFSLSPQKDAIEHNIHRALLLADKSAYHYYVDLAEKGYYNRLISGNINQVVQVDSVACDFNSYPYKARTYARQMII
RESNVTERSLVTECRLQNAVRSDDNPNGFIIEHFTITENRDLRSANR

Sequences:

>Translated_207_residues
MEFKSLTNIESSFRRIRLMLAAFVCCCTLITGYSLWSSYSFAEKQREKIYVLDGGKSLMLALSQDLSQNRPAEAREHVRR
FHELFFSLSPQKDAIEHNIHRALLLADKSAYHYYVDLAEKGYYNRLISGNINQVVQVDSVACDFNSYPYKARTYARQMII
RESNVTERSLVTECRLQNAVRSDDNPNGFIIEHFTITENRDLRSANR
>Mature_207_residues
MEFKSLTNIESSFRRIRLMLAAFVCCCTLITGYSLWSSYSFAEKQREKIYVLDGGKSLMLALSQDLSQNRPAEAREHVRR
FHELFFSLSPQKDAIEHNIHRALLLADKSAYHYYVDLAEKGYYNRLISGNINQVVQVDSVACDFNSYPYKARTYARQMII
RESNVTERSLVTECRLQNAVRSDDNPNGFIIEHFTITENRDLRSANR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24038; Mature: 24038

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFKSLTNIESSFRRIRLMLAAFVCCCTLITGYSLWSSYSFAEKQREKIYVLDGGKSLML
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEEECCCHHHH
ALSQDLSQNRPAEAREHVRRFHELFFSLSPQKDAIEHNIHRALLLADKSAYHYYVDLAEK
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCCCEEEEEEEHHC
GYYNRLISGNINQVVQVDSVACDFNSYPYKARTYARQMIIRESNVTERSLVTECRLQNAV
CHHHHHHCCCCHHHEEECCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RSDDNPNGFIIEHFTITENRDLRSANR
CCCCCCCCEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MEFKSLTNIESSFRRIRLMLAAFVCCCTLITGYSLWSSYSFAEKQREKIYVLDGGKSLML
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEEECCCHHHH
ALSQDLSQNRPAEAREHVRRFHELFFSLSPQKDAIEHNIHRALLLADKSAYHYYVDLAEK
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCCCEEEEEEEHHC
GYYNRLISGNINQVVQVDSVACDFNSYPYKARTYARQMIIRESNVTERSLVTECRLQNAV
CHHHHHHCCCCHHHEEECCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RSDDNPNGFIIEHFTITENRDLRSANR
CCCCCCCCEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA