Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29347989

Identifier: 29347989

GI number: 29347989

Start: 3222805

End: 3223650

Strand: Reverse

Name: 29347989

Synonym: BT_2579

Alternate gene names: NA

Gene position: 3223650-3222805 (Counterclockwise)

Preceding gene: 29347990

Following gene: 29347988

Centisome position: 51.49

GC content: 34.75

Gene sequence:

>846_bases
ATGTTTCCAGATAAATATGATTCATATTTGTATATAAATCAGGACAAGATTCGAGAAGATTTAAAAAGGGCATTAAAGGA
TGCATTACGTATATGTCTTTTCCATATAACACATAAATCCCCTAATATAAGAACAGAGAAAGCAACCCGGATATGTTACT
ACAGAGAATGCGGATATACAGACGAGCAGATCATAGACAAGATCCTTGAAGAGGAGTATGTTGGATTTGTTGACAATATT
GAGTCTGCCATAAAAAGCCGGGAGGCCCGTTTTCGCAATCCTCAGAATAGTGCTAAAATAGCTTGTTTTACAGAAAATGT
GCAGTCAAAGTATATGTGGGACAGGTATGCTGACGGATATAAAGGCTTTGCACTGGAATATGATCTTAGAAACTGTGTTT
TTAAATATAATAAATTGGGAATGAATGTAAATCTCTTTCCTGTTATATACACTGATCTGCGACCTGATGTCACGTTGGAT
GAAGGAAATATCCATACATATGAATATTTCAAACAGATCGGAGACAAGAACTGGCTTAATTACTTGAATTCTATAATCTC
TGTTAATCAGTTGTATTGGTACAAGGCCTATCTATATAAAGATCAAAAAGAATACGAACATGAACACGAATGGAGAATGC
TTTACTATAATTTTGAAAATGAAGAGGACTATGCCTCAATTCCAGACACAGGATGTTTGAAAGCAATATATTATGGGCCG
GATATAGCAAAAAAAGACAAGGAAAAACTACACAGAATAGCTGTAAAAAAGGGATTGAAGGAATATGATGTGAATCTTGA
TGCAGAAAGCCGTAAATATGATCTGAAAGTAACCATGTTCCAATAG

Upstream 100 bases:

>100_bases
CAATATACCGGAAAAGCTTTTTCGATATCGTAGAATGGATAAGTCCGGCTATTCTATTAAATCGTTTAGGGAGGGGACTA
TTTCATTATGCCATGCAGGG

Downstream 100 bases:

>100_bases
CTGGTGAGGTCAGTGAATATAAAGCCTGTCAAATTTTGCGGAGAAACTAAAAATACAATATGATATAAAAAATATGTTTT
GATGACATTGTGAAATTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MFPDKYDSYLYINQDKIREDLKRALKDALRICLFHITHKSPNIRTEKATRICYYRECGYTDEQIIDKILEEEYVGFVDNI
ESAIKSREARFRNPQNSAKIACFTENVQSKYMWDRYADGYKGFALEYDLRNCVFKYNKLGMNVNLFPVIYTDLRPDVTLD
EGNIHTYEYFKQIGDKNWLNYLNSIISVNQLYWYKAYLYKDQKEYEHEHEWRMLYYNFENEEDYASIPDTGCLKAIYYGP
DIAKKDKEKLHRIAVKKGLKEYDVNLDAESRKYDLKVTMFQ

Sequences:

>Translated_281_residues
MFPDKYDSYLYINQDKIREDLKRALKDALRICLFHITHKSPNIRTEKATRICYYRECGYTDEQIIDKILEEEYVGFVDNI
ESAIKSREARFRNPQNSAKIACFTENVQSKYMWDRYADGYKGFALEYDLRNCVFKYNKLGMNVNLFPVIYTDLRPDVTLD
EGNIHTYEYFKQIGDKNWLNYLNSIISVNQLYWYKAYLYKDQKEYEHEHEWRMLYYNFENEEDYASIPDTGCLKAIYYGP
DIAKKDKEKLHRIAVKKGLKEYDVNLDAESRKYDLKVTMFQ
>Mature_281_residues
MFPDKYDSYLYINQDKIREDLKRALKDALRICLFHITHKSPNIRTEKATRICYYRECGYTDEQIIDKILEEEYVGFVDNI
ESAIKSREARFRNPQNSAKIACFTENVQSKYMWDRYADGYKGFALEYDLRNCVFKYNKLGMNVNLFPVIYTDLRPDVTLD
EGNIHTYEYFKQIGDKNWLNYLNSIISVNQLYWYKAYLYKDQKEYEHEHEWRMLYYNFENEEDYASIPDTGCLKAIYYGP
DIAKKDKEKLHRIAVKKGLKEYDVNLDAESRKYDLKVTMFQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33831; Mature: 33831

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPDKYDSYLYINQDKIREDLKRALKDALRICLFHITHKSPNIRTEKATRICYYRECGYT
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEECCCCC
DEQIIDKILEEEYVGFVDNIESAIKSREARFRNPQNSAKIACFTENVQSKYMWDRYADGY
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCC
KGFALEYDLRNCVFKYNKLGMNVNLFPVIYTDLRPDVTLDEGNIHTYEYFKQIGDKNWLN
CCEEEEEHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEECCCCCHHHHHHHHHCCCHHHH
YLNSIISVNQLYWYKAYLYKDQKEYEHEHEWRMLYYNFENEEDYASIPDTGCLKAIYYGP
HHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHEEEEEECC
DIAKKDKEKLHRIAVKKGLKEYDVNLDAESRKYDLKVTMFQ
CCCHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MFPDKYDSYLYINQDKIREDLKRALKDALRICLFHITHKSPNIRTEKATRICYYRECGYT
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEECCCCC
DEQIIDKILEEEYVGFVDNIESAIKSREARFRNPQNSAKIACFTENVQSKYMWDRYADGY
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCC
KGFALEYDLRNCVFKYNKLGMNVNLFPVIYTDLRPDVTLDEGNIHTYEYFKQIGDKNWLN
CCEEEEEHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEECCCCCHHHHHHHHHCCCHHHH
YLNSIISVNQLYWYKAYLYKDQKEYEHEHEWRMLYYNFENEEDYASIPDTGCLKAIYYGP
HHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHEEEEEECC
DIAKKDKEKLHRIAVKKGLKEYDVNLDAESRKYDLKVTMFQ
CCCHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA