| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29347969
Identifier: 29347969
GI number: 29347969
Start: 3192720
End: 3194363
Strand: Reverse
Name: 29347969
Synonym: BT_2559
Alternate gene names: NA
Gene position: 3194363-3192720 (Counterclockwise)
Preceding gene: 29347970
Following gene: 29347964
Centisome position: 51.03
GC content: 44.34
Gene sequence:
>1644_bases ATGAAAAAAAATCTATATATAGCGAATCTGTTAGTAGCCGGACTGATGACATTTACCGGATGTACGGATGGTTTTGAATC AGATAATGCCAATAAAGCCGGATATACGCCTGAACTTCAGGAATATGATCTTCAGAAATATGTGCTGAACCTCGGAGTCA TGCAACAGGGTATTTACTTTAATTACGATTGGGGAAGAGGTACCGACTGGACTTTCCAGACTATACAGAATCTGGGTCAT GATATGTTTGCCGGATATTTTCACGATATGAACAACAGTTTCAATGACAAGAACTCTGTATATGCTTTGAATGACGGCTG GACAGGCTCGGCATGGACATATACTTATGGATATATAATGACCGCCGCTCAGAAATCGGAGAAGATCAATCAGGAACAGA AAGGTTTGCTGGGAGTGACCAAAATCCTGAAAGTCGAGTTGATGCACCGTATAGCTGATACTTATGGCCCTATTGTCTAC ACTAAATTCGGACAGGAAGAGGGTGATAATGTCGATAGTCAGGAAGCCGCTTACCGTCAGTTCTTCAAAGATTTGGACGA AGGAGTCAAACTGATCAACGAATATAAGAAAGACAATGCCGCTCTCGAACCTTTTGCTGCTGCCGATATTCTGATGCCGG CAGGCAAACGTACACTATCACAGTGGGTGAAGTTTGCAAACTCTCTCCGCTTGCGGCTTGCAATCCGTGTATCGATGAGT GCTCCTGATCTGGCGAGAGCAGAAGTTGCCAAAGCGATGGATGCAACTGCCGGTGGCGTGTTGGAGAGTGCGGATGAAAC AGTTGCTGTTTCTACCGAAAGCGGTTATAAGAATCCGCTGGGAACAGTCAATGAAGGCTGGGGAGAAGTATTCATGGGTG CTACGATGGAGTCTGTTTTGGTAGGATATAATGATCCGCGACTGATTAAGTATTACTCGAAAGCGGAAGGTGGTGATATA AAAGACGAAAAGGGTAATTTGATTATTGCCGAAAGAAATAAGATTGCCGGTACTTATAAAGGTGTTCCCCAAGGAACAGG AGTTACTGTAAAAGACGAAAACCGTTACCGTCTGCATTCCAAGAGTACGATAACCAAACAGACCGATGCTATCTTGATGA CTGCTGCCGAAGTATGGTTCCTTCGTGCTGAGGCTGCCTTGCGTGGATTTACTTCCGAAAACGTGAAAGACTGCTACGAG AAAGGTATTACGGTTTCCTGTCAGCAATGGGGAGTGAATGTAGGCGATTATCTCACAAGTGATGCTACTCCTTCCGATTA TGTCGATGCCTTCGAAGCAAAATATGATGTGAAAGCGCTGATTAAAGTGACTCCGAAGTGGGATGGAGGTGCTTCTCCGG AAGAGCAACTGGAAAGAATCCTTACACAGAAGTGGATTGCTTGTTATCCTGAAGGCTATGAAGCTTGGACAGAACAACGC CGTACAGGTTATCCGCAGTTGTTCAAAGTCTTTGTGAACAATAGTGGTGGAGCTATCGATACCAACATACGTATTCGTCG CTTGCCATATCCGTCAGACATTCAAAAAAACAATCCTACTCAATATTCTGCTTTGAAGAAAGCTTTGGGAGGTGAAGATA ACGGTGGAACTCGCCTTTGGTGGGATACTGGTAGAAATTTCTAG
Upstream 100 bases:
>100_bases AGGTAACACTAATCAGGGAGTTGATGTATTCGGTATGCCGACAACCCGTAACATTGGTTTCAACGTTAAATTTACATTCT AACTTTAAAGCAAGCGAATT
Downstream 100 bases:
>100_bases AGGTTTATAAATATTAGGTGTAACTTTTTTTAATTCAAACTTGTTTTCTCCGTGTATTAGGCAAAAAGTAGAGGAGAAAG ATTGTGGGGGAGTGAAGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MKKNLYIANLLVAGLMTFTGCTDGFESDNANKAGYTPELQEYDLQKYVLNLGVMQQGIYFNYDWGRGTDWTFQTIQNLGH DMFAGYFHDMNNSFNDKNSVYALNDGWTGSAWTYTYGYIMTAAQKSEKINQEQKGLLGVTKILKVELMHRIADTYGPIVY TKFGQEEGDNVDSQEAAYRQFFKDLDEGVKLINEYKKDNAALEPFAAADILMPAGKRTLSQWVKFANSLRLRLAIRVSMS APDLARAEVAKAMDATAGGVLESADETVAVSTESGYKNPLGTVNEGWGEVFMGATMESVLVGYNDPRLIKYYSKAEGGDI KDEKGNLIIAERNKIAGTYKGVPQGTGVTVKDENRYRLHSKSTITKQTDAILMTAAEVWFLRAEAALRGFTSENVKDCYE KGITVSCQQWGVNVGDYLTSDATPSDYVDAFEAKYDVKALIKVTPKWDGGASPEEQLERILTQKWIACYPEGYEAWTEQR RTGYPQLFKVFVNNSGGAIDTNIRIRRLPYPSDIQKNNPTQYSALKKALGGEDNGGTRLWWDTGRNF
Sequences:
>Translated_547_residues MKKNLYIANLLVAGLMTFTGCTDGFESDNANKAGYTPELQEYDLQKYVLNLGVMQQGIYFNYDWGRGTDWTFQTIQNLGH DMFAGYFHDMNNSFNDKNSVYALNDGWTGSAWTYTYGYIMTAAQKSEKINQEQKGLLGVTKILKVELMHRIADTYGPIVY TKFGQEEGDNVDSQEAAYRQFFKDLDEGVKLINEYKKDNAALEPFAAADILMPAGKRTLSQWVKFANSLRLRLAIRVSMS APDLARAEVAKAMDATAGGVLESADETVAVSTESGYKNPLGTVNEGWGEVFMGATMESVLVGYNDPRLIKYYSKAEGGDI KDEKGNLIIAERNKIAGTYKGVPQGTGVTVKDENRYRLHSKSTITKQTDAILMTAAEVWFLRAEAALRGFTSENVKDCYE KGITVSCQQWGVNVGDYLTSDATPSDYVDAFEAKYDVKALIKVTPKWDGGASPEEQLERILTQKWIACYPEGYEAWTEQR RTGYPQLFKVFVNNSGGAIDTNIRIRRLPYPSDIQKNNPTQYSALKKALGGEDNGGTRLWWDTGRNF >Mature_547_residues MKKNLYIANLLVAGLMTFTGCTDGFESDNANKAGYTPELQEYDLQKYVLNLGVMQQGIYFNYDWGRGTDWTFQTIQNLGH DMFAGYFHDMNNSFNDKNSVYALNDGWTGSAWTYTYGYIMTAAQKSEKINQEQKGLLGVTKILKVELMHRIADTYGPIVY TKFGQEEGDNVDSQEAAYRQFFKDLDEGVKLINEYKKDNAALEPFAAADILMPAGKRTLSQWVKFANSLRLRLAIRVSMS APDLARAEVAKAMDATAGGVLESADETVAVSTESGYKNPLGTVNEGWGEVFMGATMESVLVGYNDPRLIKYYSKAEGGDI KDEKGNLIIAERNKIAGTYKGVPQGTGVTVKDENRYRLHSKSTITKQTDAILMTAAEVWFLRAEAALRGFTSENVKDCYE KGITVSCQQWGVNVGDYLTSDATPSDYVDAFEAKYDVKALIKVTPKWDGGASPEEQLERILTQKWIACYPEGYEAWTEQR RTGYPQLFKVFVNNSGGAIDTNIRIRRLPYPSDIQKNNPTQYSALKKALGGEDNGGTRLWWDTGRNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61141; Mature: 61141
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNLYIANLLVAGLMTFTGCTDGFESDNANKAGYTPELQEYDLQKYVLNLGVMQQGIYF CCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEE NYDWGRGTDWTFQTIQNLGHDMFAGYFHDMNNSFNDKNSVYALNDGWTGSAWTYTYGYIM EECCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEHHHHH TAAQKSEKINQEQKGLLGVTKILKVELMHRIADTYGPIVYTKFGQEEGDNVDSQEAAYRQ HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHH FFKDLDEGVKLINEYKKDNAALEPFAAADILMPAGKRTLSQWVKFANSLRLRLAIRVSMS HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCEEEEEEEEEECC APDLARAEVAKAMDATAGGVLESADETVAVSTESGYKNPLGTVNEGWGEVFMGATMESVL CCCHHHHHHHHHHHHHCCCHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCHHHHH VGYNDPRLIKYYSKAEGGDIKDEKGNLIIAERNKIAGTYKGVPQGTGVTVKDENRYRLHS CCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCEEEECCCCEEECC KSTITKQTDAILMTAAEVWFLRAEAALRGFTSENVKDCYEKGITVSCQQWGVNVGDYLTS CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEHHHCCCHHHHHCC DATPSDYVDAFEAKYDVKALIKVTPKWDGGASPEEQLERILTQKWIACYPEGYEAWTEQR CCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH RTGYPQLFKVFVNNSGGAIDTNIRIRRLPYPSDIQKNNPTQYSALKKALGGEDNGGTRLW HCCCHHHHHEEECCCCCEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEE WDTGRNF ECCCCCC >Mature Secondary Structure MKKNLYIANLLVAGLMTFTGCTDGFESDNANKAGYTPELQEYDLQKYVLNLGVMQQGIYF CCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEE NYDWGRGTDWTFQTIQNLGHDMFAGYFHDMNNSFNDKNSVYALNDGWTGSAWTYTYGYIM EECCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEHHHHH TAAQKSEKINQEQKGLLGVTKILKVELMHRIADTYGPIVYTKFGQEEGDNVDSQEAAYRQ HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHH FFKDLDEGVKLINEYKKDNAALEPFAAADILMPAGKRTLSQWVKFANSLRLRLAIRVSMS HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCEEEEEEEEEECC APDLARAEVAKAMDATAGGVLESADETVAVSTESGYKNPLGTVNEGWGEVFMGATMESVL CCCHHHHHHHHHHHHHCCCHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCHHHHH VGYNDPRLIKYYSKAEGGDIKDEKGNLIIAERNKIAGTYKGVPQGTGVTVKDENRYRLHS CCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCEEEECCCCEEECC KSTITKQTDAILMTAAEVWFLRAEAALRGFTSENVKDCYEKGITVSCQQWGVNVGDYLTS CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEHHHCCCHHHHHCC DATPSDYVDAFEAKYDVKALIKVTPKWDGGASPEEQLERILTQKWIACYPEGYEAWTEQR CCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH RTGYPQLFKVFVNNSGGAIDTNIRIRRLPYPSDIQKNNPTQYSALKKALGGEDNGGTRLW HCCCHHHHHEEECCCCCEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEE WDTGRNF ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA