Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347947

Identifier: 29347947

GI number: 29347947

Start: 3170856

End: 3171239

Strand: Reverse

Name: 29347947

Synonym: BT_2537

Alternate gene names: NA

Gene position: 3171239-3170856 (Counterclockwise)

Preceding gene: 29347949

Following gene: 29347937

Centisome position: 50.66

GC content: 42.45

Gene sequence:

>384_bases
ATGATTTCCTGTTTATTAAGAATACACAGTTTACGTTTTTTCGACGGAGGCTTGCATGAGGTTCCTGTGGAAGAAGTGAT
GACGGTTGCGCTTATTGCGATATTCATCTTTGTTCCGTGCCTGTGGCTTGTCCGGTATTTAAAAGATAAGAGGCTGGACT
CGGACGAGAAAGACAAGTTTATACAAATACATATTATCTCGACCATTGTCCTGACTATTGCGGGCGGTGTTTTTGCACGG
ATGTCCGGACTTGTCAATAAATGGATAGACGAACAGCCGTTGATTATCGCTGTTTACATCGCTTTGGCGCTTAGTTCCTT
CGGCATCATTGTCGGAAAAATGATCGACTTTTGGGTGTATTGTCTCCGAAAGAAGATGTTTTAA

Upstream 100 bases:

>100_bases
TCCGGTGACTCAGGAGCCGGGATGTCCGGAGAACGACCGGCTAGGCGATGGAAAGGGAATGAAGAATATGAATAAAGAAT
TAACGGATGTAGTATAAATG

Downstream 100 bases:

>100_bases
GTATCTGTATATAGATGCCTGTTGCCTCTGCCCGAAGAAGGTTGGAAACAGGCTTTGTCCGGTATTTATTGCTAAAGTAT
GGTTTTGAGGGTCGTTTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MISCLLRIHSLRFFDGGLHEVPVEEVMTVALIAIFIFVPCLWLVRYLKDKRLDSDEKDKFIQIHIISTIVLTIAGGVFAR
MSGLVNKWIDEQPLIIAVYIALALSSFGIIVGKMIDFWVYCLRKKMF

Sequences:

>Translated_127_residues
MISCLLRIHSLRFFDGGLHEVPVEEVMTVALIAIFIFVPCLWLVRYLKDKRLDSDEKDKFIQIHIISTIVLTIAGGVFAR
MSGLVNKWIDEQPLIIAVYIALALSSFGIIVGKMIDFWVYCLRKKMF
>Mature_127_residues
MISCLLRIHSLRFFDGGLHEVPVEEVMTVALIAIFIFVPCLWLVRYLKDKRLDSDEKDKFIQIHIISTIVLTIAGGVFAR
MSGLVNKWIDEQPLIIAVYIALALSSFGIIVGKMIDFWVYCLRKKMF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14577; Mature: 14577

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISCLLRIHSLRFFDGGLHEVPVEEVMTVALIAIFIFVPCLWLVRYLKDKRLDSDEKDKF
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
IQIHIISTIVLTIAGGVFARMSGLVNKWIDEQPLIIAVYIALALSSFGIIVGKMIDFWVY
EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLRKKMF
HHHHHCC
>Mature Secondary Structure
MISCLLRIHSLRFFDGGLHEVPVEEVMTVALIAIFIFVPCLWLVRYLKDKRLDSDEKDKF
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
IQIHIISTIVLTIAGGVFARMSGLVNKWIDEQPLIIAVYIALALSSFGIIVGKMIDFWVY
EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLRKKMF
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA