Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29347930

Identifier: 29347930

GI number: 29347930

Start: 3144206

End: 3144877

Strand: Reverse

Name: 29347930

Synonym: BT_2520

Alternate gene names: NA

Gene position: 3144877-3144206 (Counterclockwise)

Preceding gene: 29347931

Following gene: 29347929

Centisome position: 50.23

GC content: 45.24

Gene sequence:

>672_bases
ATGGATAAAGAAAAAGAGCATATCATAGCGGATAAAACAATGTTGCGGGTGGCACGGATCACCTCCATCGTGTTTACTCC
ATTTTCTATACCGTTTCTGGCGTTTTTGGTGTTATTCCTGTTTTCTTATCTCCGTATCATGCCGATACTTTATAAGGGAA
TTGTGTTGGGAATCGTTTACTGCTTCACCATACTGACGCCCACCATCACCATTTTCCTGTTCCGGAAGATCAACGGGTTT
GCCCGTCAGGAACTGAGTGAGCGTAAGAAACGTTATGTACCTATCCTGCTGACTATCATTTCGTATGTGTTCTGCCTGCT
GATGATGCGTAAACTGAATATTCCCTGGTATATGACCGGAATCATTTTTGTTTCCCTGGTGATATCGATCATCTGCATTC
TGGTCAATCTGAAATGGAAACTGAGCGAACACATGGCGGGGATGGGCGGTATTATCGGCGGACTGGTTTCGTTCAGTGCG
CTGTTCAGCTATAATCCGGTAGTGTGGTTGTGCCTGTTTATTCTGATTGCAGGCATATTGGGTTCGGCGCGGATTGTGCT
GGGGCATCACACTTTGGGCGAAGTGCTTTCCGGTTTTGTAGTCGGGCTGGTCTGCTCCTTTTTGATACTCCATCCGGCGT
ACAACCTTATATTCAGAGTATTTTTATTTTAA

Upstream 100 bases:

>100_bases
GTACGGTGGCGAAATACCGTCAGCAGTTGAATATACCGGTGGCAAGACTGAGAAAGTGAGTTTAAAGTATTAACTATAAA
GTATTAAGTATTAGGTGCTG

Downstream 100 bases:

>100_bases
AAACAATATAAATCCTAAAAACTAATTATTATGAACTTTCCACAGAACTTGAAGTACACGAATGAACACGAGTGGATTCG
CGTAGAAGGAGACATCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MDKEKEHIIADKTMLRVARITSIVFTPFSIPFLAFLVLFLFSYLRIMPILYKGIVLGIVYCFTILTPTITIFLFRKINGF
ARQELSERKKRYVPILLTIISYVFCLLMMRKLNIPWYMTGIIFVSLVISIICILVNLKWKLSEHMAGMGGIIGGLVSFSA
LFSYNPVVWLCLFILIAGILGSARIVLGHHTLGEVLSGFVVGLVCSFLILHPAYNLIFRVFLF

Sequences:

>Translated_223_residues
MDKEKEHIIADKTMLRVARITSIVFTPFSIPFLAFLVLFLFSYLRIMPILYKGIVLGIVYCFTILTPTITIFLFRKINGF
ARQELSERKKRYVPILLTIISYVFCLLMMRKLNIPWYMTGIIFVSLVISIICILVNLKWKLSEHMAGMGGIIGGLVSFSA
LFSYNPVVWLCLFILIAGILGSARIVLGHHTLGEVLSGFVVGLVCSFLILHPAYNLIFRVFLF
>Mature_223_residues
MDKEKEHIIADKTMLRVARITSIVFTPFSIPFLAFLVLFLFSYLRIMPILYKGIVLGIVYCFTILTPTITIFLFRKINGF
ARQELSERKKRYVPILLTIISYVFCLLMMRKLNIPWYMTGIIFVSLVISIICILVNLKWKLSEHMAGMGGIIGGLVSFSA
LFSYNPVVWLCLFILIAGILGSARIVLGHHTLGEVLSGFVVGLVCSFLILHPAYNLIFRVFLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25366; Mature: 25366

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKEKEHIIADKTMLRVARITSIVFTPFSIPFLAFLVLFLFSYLRIMPILYKGIVLGIVY
CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFTILTPTITIFLFRKINGFARQELSERKKRYVPILLTIISYVFCLLMMRKLNIPWYMTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IIFVSLVISIICILVNLKWKLSEHMAGMGGIIGGLVSFSALFSYNPVVWLCLFILIAGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GSARIVLGHHTLGEVLSGFVVGLVCSFLILHPAYNLIFRVFLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDKEKEHIIADKTMLRVARITSIVFTPFSIPFLAFLVLFLFSYLRIMPILYKGIVLGIVY
CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFTILTPTITIFLFRKINGFARQELSERKKRYVPILLTIISYVFCLLMMRKLNIPWYMTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IIFVSLVISIICILVNLKWKLSEHMAGMGGIIGGLVSFSALFSYNPVVWLCLFILIAGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GSARIVLGHHTLGEVLSGFVVGLVCSFLILHPAYNLIFRVFLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA