Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347887

Identifier: 29347887

GI number: 29347887

Start: 3098236

End: 3099447

Strand: Reverse

Name: 29347887

Synonym: BT_2477

Alternate gene names: NA

Gene position: 3099447-3098236 (Counterclockwise)

Preceding gene: 29347888

Following gene: 29347886

Centisome position: 49.51

GC content: 43.15

Gene sequence:

>1212_bases
ATGAAGAAATTAATTTTAATGGTTGTAATGGCTGCCCTTTCGTTGGCTGCTATGGCACAGCATGAAGAAGATACAGAAAA
CGGTGTAGTGTCACTTGCCGGAAGAGAGGGATTTACGATAGAAACCAAGAAGGGAGACTTTGTATTCAAGCCCTATCTGT
TGGTACAGACTTGTGCAAATTTCAATTGGTATGATGATGAAGGCCTGGATAAGGCATACAATCAGGATAATGTAGCTAAT
TCCGGTTTCTCAATTCCCTATGCTGTATTGGGCTTCACTGGTAAAGCTTTTGGTAAAGTAGCCTTTAATCTTTCTATCAA
TGCGGCTGCCAGTGGGGGAGCATTGCTTCAACAAGCATGGTTCGATGTGCAACTTAAAAAACAGTTTGCCGTGCGTGTCG
GTAAATTCAAAACACCTTTCTCACATGCTTATCTGACGACGTTGGGCGAAACATTGTTGCCGCAGTTGCCAGTATCATTG
ACTTCCGCCATCATTCTGCCTTATTCCTTGAATGCGGTAACGCCTAACATCGGTACCGGTTTTGACCTCGGTGTTGAAAT
TCACGGATTGTTAGCTGATAAATTTGGCTATGAAGTAGGTTTATTCAATGGTACCGGTTCTTCTGTAAATACAGCTACAA
AAACTCTGAGTGATGATTGGCATATTCCTTCTTTACTGTATGCGGGACGCTTTACTTATATGCCTAAAGGTGTGATGCCG
TCCACCCAAGGTAATCCTAACCGTTTGAATGAAGATAAGATCATGTTCGGTGTATCGGCTTCAATCAATGTGGAAAGTGA
GAATGAAAGTACCAATGATACCCGTGTGGGAGTGGAATTTGCCATGTTAAAGAATAAACTGTATCTGGGCGCCGAAGCAT
ACTATATGAATGTGGGCTTCACCGATCGTCAGAAAATAAATGAGACATACAATTACCTGGGTGGTTATGTACAGGGCGGC
TACTTTGTAGCTCCCCGTTTGCAGGCTGCCTTGCGTTATGACTTCTTTAACCGTAACGGTACCAGCGATGACGGATTTCT
GAATATGCCGGCTGTGGGTGTGAATTATTTCTTTAAGGGTTGTAACCTGAAACTCCAGGCTATGTACCAGTATATTGCCC
GTACGGGGCACGATACACAGCTCGACCGAGATAATGATAATTTAGGTCTGGCCACTCATTCTGCAACAGTAATGCTGCAA
TATACTTTCTAA

Upstream 100 bases:

>100_bases
AAAGATGAGTAAAGAAGATCGTAATGCTTTGGTCGCATTTCTGAAATCATTATAAAACAAATAACGAACAATAAAACCAA
TAAGTATTATACAAGCAATT

Downstream 100 bases:

>100_bases
AAAAACAAAGAGAGTAGTTATGAAGAAATGTATATTATTCTTTGCTGCTATCTGGATGACACTCTGCTTCTGTTCATGTG
ATGATGGAAGAATCTATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MKKLILMVVMAALSLAAMAQHEEDTENGVVSLAGREGFTIETKKGDFVFKPYLLVQTCANFNWYDDEGLDKAYNQDNVAN
SGFSIPYAVLGFTGKAFGKVAFNLSINAAASGGALLQQAWFDVQLKKQFAVRVGKFKTPFSHAYLTTLGETLLPQLPVSL
TSAIILPYSLNAVTPNIGTGFDLGVEIHGLLADKFGYEVGLFNGTGSSVNTATKTLSDDWHIPSLLYAGRFTYMPKGVMP
STQGNPNRLNEDKIMFGVSASINVESENESTNDTRVGVEFAMLKNKLYLGAEAYYMNVGFTDRQKINETYNYLGGYVQGG
YFVAPRLQAALRYDFFNRNGTSDDGFLNMPAVGVNYFFKGCNLKLQAMYQYIARTGHDTQLDRDNDNLGLATHSATVMLQ
YTF

Sequences:

>Translated_403_residues
MKKLILMVVMAALSLAAMAQHEEDTENGVVSLAGREGFTIETKKGDFVFKPYLLVQTCANFNWYDDEGLDKAYNQDNVAN
SGFSIPYAVLGFTGKAFGKVAFNLSINAAASGGALLQQAWFDVQLKKQFAVRVGKFKTPFSHAYLTTLGETLLPQLPVSL
TSAIILPYSLNAVTPNIGTGFDLGVEIHGLLADKFGYEVGLFNGTGSSVNTATKTLSDDWHIPSLLYAGRFTYMPKGVMP
STQGNPNRLNEDKIMFGVSASINVESENESTNDTRVGVEFAMLKNKLYLGAEAYYMNVGFTDRQKINETYNYLGGYVQGG
YFVAPRLQAALRYDFFNRNGTSDDGFLNMPAVGVNYFFKGCNLKLQAMYQYIARTGHDTQLDRDNDNLGLATHSATVMLQ
YTF
>Mature_403_residues
MKKLILMVVMAALSLAAMAQHEEDTENGVVSLAGREGFTIETKKGDFVFKPYLLVQTCANFNWYDDEGLDKAYNQDNVAN
SGFSIPYAVLGFTGKAFGKVAFNLSINAAASGGALLQQAWFDVQLKKQFAVRVGKFKTPFSHAYLTTLGETLLPQLPVSL
TSAIILPYSLNAVTPNIGTGFDLGVEIHGLLADKFGYEVGLFNGTGSSVNTATKTLSDDWHIPSLLYAGRFTYMPKGVMP
STQGNPNRLNEDKIMFGVSASINVESENESTNDTRVGVEFAMLKNKLYLGAEAYYMNVGFTDRQKINETYNYLGGYVQGG
YFVAPRLQAALRYDFFNRNGTSDDGFLNMPAVGVNYFFKGCNLKLQAMYQYIARTGHDTQLDRDNDNLGLATHSATVMLQ
YTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44334; Mature: 44334

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLILMVVMAALSLAAMAQHEEDTENGVVSLAGREGFTIETKKGDFVFKPYLLVQTCAN
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCEEECHHHHHHHHCC
FNWYDDEGLDKAYNQDNVANSGFSIPYAVLGFTGKAFGKVAFNLSINAAASGGALLQQAW
CCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEECCCCCCHHHHHHH
FDVQLKKQFAVRVGKFKTPFSHAYLTTLGETLLPQLPVSLTSAIILPYSLNAVTPNIGTG
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHCEEEEEEECCEECCCCCCC
FDLGVEIHGLLADKFGYEVGLFNGTGSSVNTATKTLSDDWHIPSLLYAGRFTYMPKGVMP
EECCEEEEEEEHHHCCCEEEEECCCCCCCCHHHHHCCCCCCCCHHHHCCCEEECCCCCCC
STQGNPNRLNEDKIMFGVSASINVESENESTNDTRVGVEFAMLKNKLYLGAEAYYMNVGF
CCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCEECEEEEEECCEEEECCEEEEEECCC
TDRQKINETYNYLGGYVQGGYFVAPRLQAALRYDFFNRNGTSDDGFLNMPAVGVNYFFKG
CCHHHHHHHHHHCCCEECCCEEECHHHHHHHHHHHHCCCCCCCCCEEECCEECEEHEEEC
CNLKLQAMYQYIARTGHDTQLDRDNDNLGLATHSATVMLQYTF
CCEEHHHHHHHHHHCCCCCCCCCCCCCCEEEEECEEEEEEEEC
>Mature Secondary Structure
MKKLILMVVMAALSLAAMAQHEEDTENGVVSLAGREGFTIETKKGDFVFKPYLLVQTCAN
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCEEECHHHHHHHHCC
FNWYDDEGLDKAYNQDNVANSGFSIPYAVLGFTGKAFGKVAFNLSINAAASGGALLQQAW
CCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEECCCCCCHHHHHHH
FDVQLKKQFAVRVGKFKTPFSHAYLTTLGETLLPQLPVSLTSAIILPYSLNAVTPNIGTG
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHCEEEEEEECCEECCCCCCC
FDLGVEIHGLLADKFGYEVGLFNGTGSSVNTATKTLSDDWHIPSLLYAGRFTYMPKGVMP
EECCEEEEEEEHHHCCCEEEEECCCCCCCCHHHHHCCCCCCCCHHHHCCCEEECCCCCCC
STQGNPNRLNEDKIMFGVSASINVESENESTNDTRVGVEFAMLKNKLYLGAEAYYMNVGF
CCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCEECEEEEEECCEEEECCEEEEEECCC
TDRQKINETYNYLGGYVQGGYFVAPRLQAALRYDFFNRNGTSDDGFLNMPAVGVNYFFKG
CCHHHHHHHHHHCCCEECCCEEECHHHHHHHHHHHHCCCCCCCCCEEECCEECEEHEEEC
CNLKLQAMYQYIARTGHDTQLDRDNDNLGLATHSATVMLQYTF
CCEEHHHHHHHHHHCCCCCCCCCCCCCCEEEEECEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA