| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29347839
Identifier: 29347839
GI number: 29347839
Start: 3039512
End: 3040036
Strand: Reverse
Name: 29347839
Synonym: BT_2429
Alternate gene names: NA
Gene position: 3040036-3039512 (Counterclockwise)
Preceding gene: 29347842
Following gene: 29347838
Centisome position: 48.56
GC content: 32.0
Gene sequence:
>525_bases ATGAAAGAGCGGTCTCCAGTTAAAAAGAATATACTAAAATTGATTCCTTATATAGAAATTATTGCAGGAGTCATTTTTCT CTGTTTGGAGATTCATGACTATCGTACTTTGTATTCTATGGCCGAAGCTGATGCAATGTATGGGGGACTTGCTGATTTTT GTAAGTACAAAGAGAATGTATTTTGTCCGGCATTTTTCTGGATAATTGTTATACTGACAGGACTCAGTTATTGGAAAAAT AAAAAGATATATTGGATTTTAACGCAGGCATTGGTGTTTATGGTCTTTTTTAGAGCTATGTTTCCGTTTTATGCCATTTT TATAGAGTTAAATCCAGTAGTCTTTTATATTCTTCCACTTTTGTACTCTACAATATTCTTTGTGGTAGAAAGAAAGTTGT TTAAAATCAAGCAAATAGATTCTGTTGATATTACAGTTAAAACAAAAATCACGGGGATCGGAATAGGTATCTTATGTACT ATCATTTATTTCCTGCCCTTTTTGACCGTTTTTTGCTTAATATGA
Upstream 100 bases:
>100_bases TGCTCGGGAATGCCCAATCTTTATTTGCCTGTATCTGATAATTATGTATTTGTTTTTTCAATTAATAAAAACTATATTTG TTTGAAAAATAATTTGATAC
Downstream 100 bases:
>100_bases TAGCCGTCTATATTTATTTTTCCACAGTGATTTGATAGCCGTTTTGCTCTCATGCTCTAACAGTTCGTCTGTATGCCTTT ATTCATCGATGTTTTAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MKERSPVKKNILKLIPYIEIIAGVIFLCLEIHDYRTLYSMAEADAMYGGLADFCKYKENVFCPAFFWIIVILTGLSYWKN KKIYWILTQALVFMVFFRAMFPFYAIFIELNPVVFYILPLLYSTIFFVVERKLFKIKQIDSVDITVKTKITGIGIGILCT IIYFLPFLTVFCLI
Sequences:
>Translated_174_residues MKERSPVKKNILKLIPYIEIIAGVIFLCLEIHDYRTLYSMAEADAMYGGLADFCKYKENVFCPAFFWIIVILTGLSYWKN KKIYWILTQALVFMVFFRAMFPFYAIFIELNPVVFYILPLLYSTIFFVVERKLFKIKQIDSVDITVKTKITGIGIGILCT IIYFLPFLTVFCLI >Mature_174_residues MKERSPVKKNILKLIPYIEIIAGVIFLCLEIHDYRTLYSMAEADAMYGGLADFCKYKENVFCPAFFWIIVILTGLSYWKN KKIYWILTQALVFMVFFRAMFPFYAIFIELNPVVFYILPLLYSTIFFVVERKLFKIKQIDSVDITVKTKITGIGIGILCT IIYFLPFLTVFCLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20386; Mature: 20386
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKERSPVKKNILKLIPYIEIIAGVIFLCLEIHDYRTLYSMAEADAMYGGLADFCKYKENV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC FCPAFFWIIVILTGLSYWKNKKIYWILTQALVFMVFFRAMFPFYAIFIELNPVVFYILPL CHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYSTIFFVVERKLFKIKQIDSVDITVKTKITGIGIGILCTIIYFLPFLTVFCLI HHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKERSPVKKNILKLIPYIEIIAGVIFLCLEIHDYRTLYSMAEADAMYGGLADFCKYKENV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC FCPAFFWIIVILTGLSYWKNKKIYWILTQALVFMVFFRAMFPFYAIFIELNPVVFYILPL CHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYSTIFFVVERKLFKIKQIDSVDITVKTKITGIGIGILCTIIYFLPFLTVFCLI HHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA