| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347771
Identifier: 29347771
GI number: 29347771
Start: 2941696
End: 2942085
Strand: Reverse
Name: 29347771
Synonym: BT_2361
Alternate gene names: NA
Gene position: 2942085-2941696 (Counterclockwise)
Preceding gene: 29347778
Following gene: 29347770
Centisome position: 47.0
GC content: 37.44
Gene sequence:
>390_bases ATGGATGTCGAAGTAAAAAATAAAGCAAACAGGAGGCACGTCGGACATAACCTGCAAAAGATCCGTGTTTATTTTGGTAT GAAGCAGGAGGCTTTAGCGGCTGATCTTGGTGTAAATCAACAGGTCATTTCAAAGATTGAAAAACAGGAGGAAATCGAAG AAGGGCTTCTAAATCAAATAGCTTCTGTATTGGGGATATCTGCTGAGGTGATTAAGGATTTTGATGTTGAGAAGGCAATA TATAATATCAATAACATTAGAGATAACACCTTTGAACAAGGAGCTACATCAATAGCCCAGCAGTTCAATCCATTGGATAA AATCGTGGAATTGTATGAACGTCTGCTGCAAAGTGAGAGAGAGAAAATTGAATTATTAAAGAAAAGGTGA
Upstream 100 bases:
>100_bases TAGAGCGTTGTGGATTGAAAAAAAATAAAGTTGACTTTGAATCGGAATGGGTTGATTTTTACTATCTTTGTCTCAATGTA ATCACATAAAGAACAATAAT
Downstream 100 bases:
>100_bases TTATTATTAGTTGATTAACTAATTTAACTAAGAAATAAATATTATGGAAACAGAAACTTATACAAACAGTTCACATTTGG GGCGTAAAATAGAAAGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: Xin-Antitoxin System Antitoxin Component Xre Family; Transcriptional Regulator; XRE Family Plasmid Maintenance System Antidote Protein; Helix-TurN-Helix Domain Protein; HTH_3 Family Transcriptional Regulator Protein; Helix-Turn-Helix Domain Protein
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MDVEVKNKANRRHVGHNLQKIRVYFGMKQEALAADLGVNQQVISKIEKQEEIEEGLLNQIASVLGISAEVIKDFDVEKAI YNINNIRDNTFEQGATSIAQQFNPLDKIVELYERLLQSEREKIELLKKR
Sequences:
>Translated_129_residues MDVEVKNKANRRHVGHNLQKIRVYFGMKQEALAADLGVNQQVISKIEKQEEIEEGLLNQIASVLGISAEVIKDFDVEKAI YNINNIRDNTFEQGATSIAQQFNPLDKIVELYERLLQSEREKIELLKKR >Mature_129_residues MDVEVKNKANRRHVGHNLQKIRVYFGMKQEALAADLGVNQQVISKIEKQEEIEEGLLNQIASVLGISAEVIKDFDVEKAI YNINNIRDNTFEQGATSIAQQFNPLDKIVELYERLLQSEREKIELLKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14851; Mature: 14851
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVEVKNKANRRHVGHNLQKIRVYFGMKQEALAADLGVNQQVISKIEKQEEIEEGLLNQI CCCCCCCCHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ASVLGISAEVIKDFDVEKAIYNINNIRDNTFEQGATSIAQQFNPLDKIVELYERLLQSER HHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH EKIELLKKR HHHHHHHCC >Mature Secondary Structure MDVEVKNKANRRHVGHNLQKIRVYFGMKQEALAADLGVNQQVISKIEKQEEIEEGLLNQI CCCCCCCCHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ASVLGISAEVIKDFDVEKAIYNINNIRDNTFEQGATSIAQQFNPLDKIVELYERLLQSER HHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH EKIELLKKR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA