| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is llaIM [H]
Identifier: 29347765
GI number: 29347765
Start: 2935060
End: 2936235
Strand: Reverse
Name: llaIM [H]
Synonym: BT_2355
Alternate gene names: 29347765
Gene position: 2936235-2935060 (Counterclockwise)
Preceding gene: 29347768
Following gene: 29347764
Centisome position: 46.9
GC content: 28.74
Gene sequence:
>1176_bases ATGATAGATTCAGCAAAATTGCCACATTTAATGAAATATATGGGATCAAAAAGAGAACTCCTTGATTTCATAATATCATC TATAAATGATTTGGATATTGAATCTAATTGGTTCTGTGATCTTTTCTCTGGAACATCTGTCGTTGGATGCTCGTTAAAAG ATGAATATAATGTTCAAATAAATGACATACAGATATATACTTCCATATTTGCCAACACATATTTACCCAATATAAATAAA TTAATAAATTCAACCGAGTTAGAAAAGATTAAAGACAGAGTTTTATTTTATGTTGACGAGTTTTATAGAAAGTACCCTGA TTTAATCTTTGATTATAATTCGATTGATAATTATGAAAAATTAACTAAGCTTGAAATTCAACAGCAAAACTTGATTTATA GTAATTTTGAAATAGGATTTCATTTATTTGTGAAGTATTATTCTGGTACATATTGGAGCTATACACAATGCGTCTGGATT GATTCTATTCGTGCAGTAGCAGAAGAGTATAAAGGAAAAAGTGATTATTATATCATACTATCATCGTTAATATATGCTAT GTCCTACACATCTCAAAGTACTGGACATTTTGCTCAATTTAGGGATGTTACAGAAAGTAATATGCATGATATAATGTTAT ATCGCATACGAGATATTTGGACTTATTTTGAAAAGAAATTTCTGGAAATATTAAATATGGTAGACGTGGAAGCAACTAAC CGATATACTATTACTACATTAGATTATCTTGATTGCTTAAGGTTGATTGAACGAAATACAATTGTATATGCTGATCCTCC TTATAGCTCCGTTCATTATTCAAGATTTTATCATGCTATTGAAACCTTGATAAGGTATGATTATCCGAATGTTAAATATA AAGGTCGATATCGTGAAGATCGACATCAATCTCCTTTCGGGAAAAAAACAGAGGTGAAAAACGCATTTGGTAAGTTATTT AAAGGTGTCAAAAATAAGAACTCACATTTAATACTAAGTTATAGTGATAATGGAATGATTACTCAAGATGAAATTATGGA AATTGGCAACTCTATTATGGGAAATCAATATAAAGGAGATATTCAAGTGAAAGAATATATACATAGTAAAATGGGAAGAT CAGATATTCATTCTATGGGAGTTAATGAACTAATCATATCATATAAAAGACAATAA
Upstream 100 bases:
>100_bases GTATAAAGTTGCAATGCGATCAAAAGAATATATTTACTTATTCCTTTGAAAAACAGATGACTATATGAATTTGGTTTATT TTTAATATAATTGACTTTTT
Downstream 100 bases:
>100_bases TCATGAATGAGAAAATAAATATCAAAAAGTTAAAGTCATCATGGACAAAGTATGATATTGTCAAGTTGATAGATATAACA GCAGATAATGACTTGGAACC
Product: site-specific DNA-methyltransferase
Products: NA
Alternate protein names: M.LlaI; Adenine-specific methyltransferase LlaI [H]
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MIDSAKLPHLMKYMGSKRELLDFIISSINDLDIESNWFCDLFSGTSVVGCSLKDEYNVQINDIQIYTSIFANTYLPNINK LINSTELEKIKDRVLFYVDEFYRKYPDLIFDYNSIDNYEKLTKLEIQQQNLIYSNFEIGFHLFVKYYSGTYWSYTQCVWI DSIRAVAEEYKGKSDYYIILSSLIYAMSYTSQSTGHFAQFRDVTESNMHDIMLYRIRDIWTYFEKKFLEILNMVDVEATN RYTITTLDYLDCLRLIERNTIVYADPPYSSVHYSRFYHAIETLIRYDYPNVKYKGRYREDRHQSPFGKKTEVKNAFGKLF KGVKNKNSHLILSYSDNGMITQDEIMEIGNSIMGNQYKGDIQVKEYIHSKMGRSDIHSMGVNELIISYKRQ
Sequences:
>Translated_391_residues MIDSAKLPHLMKYMGSKRELLDFIISSINDLDIESNWFCDLFSGTSVVGCSLKDEYNVQINDIQIYTSIFANTYLPNINK LINSTELEKIKDRVLFYVDEFYRKYPDLIFDYNSIDNYEKLTKLEIQQQNLIYSNFEIGFHLFVKYYSGTYWSYTQCVWI DSIRAVAEEYKGKSDYYIILSSLIYAMSYTSQSTGHFAQFRDVTESNMHDIMLYRIRDIWTYFEKKFLEILNMVDVEATN RYTITTLDYLDCLRLIERNTIVYADPPYSSVHYSRFYHAIETLIRYDYPNVKYKGRYREDRHQSPFGKKTEVKNAFGKLF KGVKNKNSHLILSYSDNGMITQDEIMEIGNSIMGNQYKGDIQVKEYIHSKMGRSDIHSMGVNELIISYKRQ >Mature_391_residues MIDSAKLPHLMKYMGSKRELLDFIISSINDLDIESNWFCDLFSGTSVVGCSLKDEYNVQINDIQIYTSIFANTYLPNINK LINSTELEKIKDRVLFYVDEFYRKYPDLIFDYNSIDNYEKLTKLEIQQQNLIYSNFEIGFHLFVKYYSGTYWSYTQCVWI DSIRAVAEEYKGKSDYYIILSSLIYAMSYTSQSTGHFAQFRDVTESNMHDIMLYRIRDIWTYFEKKFLEILNMVDVEATN RYTITTLDYLDCLRLIERNTIVYADPPYSSVHYSRFYHAIETLIRYDYPNVKYKGRYREDRHQSPFGKKTEVKNAFGKLF KGVKNKNSHLILSYSDNGMITQDEIMEIGNSIMGNQYKGDIQVKEYIHSKMGRSDIHSMGVNELIISYKRQ
Specific function: Methylation of specific adenine residues; required for both restriction and modification activities. May recognize a non- palindromic sequence [H]
COG id: COG3392
COG function: function code L; Adenine-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012186 - InterPro: IPR023095 - InterPro: IPR002052 - InterPro: IPR012327 [H]
Pfam domain/function: PF02086 MethyltransfD12 [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 46268; Mature: 46268
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDSAKLPHLMKYMGSKRELLDFIISSINDLDIESNWFCDLFSGTSVVGCSLKDEYNVQI CCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEECCCCCCEEE NDIQIYTSIFANTYLPNINKLINSTELEKIKDRVLFYVDEFYRKYPDLIFDYNSIDNYEK EEEEEHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCHHH LTKLEIQQQNLIYSNFEIGFHLFVKYYSGTYWSYTQCVWIDSIRAVAEEYKGKSDYYIIL HHHHHHHHCCEEEECCCHHHEEEEEHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHH SSLIYAMSYTSQSTGHFAQFRDVTESNMHDIMLYRIRDIWTYFEKKFLEILNMVDVEATN HHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RYTITTLDYLDCLRLIERNTIVYADPPYSSVHYSRFYHAIETLIRYDYPNVKYKGRYRED CEEEEEHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCC RHQSPFGKKTEVKNAFGKLFKGVKNKNSHLILSYSDNGMITQDEIMEIGNSIMGNQYKGD CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC IQVKEYIHSKMGRSDIHSMGVNELIISYKRQ HHHHHHHHHHCCHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure MIDSAKLPHLMKYMGSKRELLDFIISSINDLDIESNWFCDLFSGTSVVGCSLKDEYNVQI CCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEECCCCCCEEE NDIQIYTSIFANTYLPNINKLINSTELEKIKDRVLFYVDEFYRKYPDLIFDYNSIDNYEK EEEEEHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCHHH LTKLEIQQQNLIYSNFEIGFHLFVKYYSGTYWSYTQCVWIDSIRAVAEEYKGKSDYYIIL HHHHHHHHCCEEEECCCHHHEEEEEHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHH SSLIYAMSYTSQSTGHFAQFRDVTESNMHDIMLYRIRDIWTYFEKKFLEILNMVDVEATN HHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RYTITTLDYLDCLRLIERNTIVYADPPYSSVHYSRFYHAIETLIRYDYPNVKYKGRYRED CEEEEEHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCC RHQSPFGKKTEVKNAFGKLFKGVKNKNSHLILSYSDNGMITQDEIMEIGNSIMGNQYKGD CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC IQVKEYIHSKMGRSDIHSMGVNELIISYKRQ HHHHHHHHHHCCHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1906061 [H]