| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347742
Identifier: 29347742
GI number: 29347742
Start: 2914630
End: 2914983
Strand: Reverse
Name: 29347742
Synonym: BT_2332
Alternate gene names: NA
Gene position: 2914983-2914630 (Counterclockwise)
Preceding gene: 29347743
Following gene: 29347741
Centisome position: 46.56
GC content: 48.31
Gene sequence:
>354_bases ATGTTAGTAGATAAAACGGAATTTGAAGCATGGATGGAACGTATCATGGGTGAGCTGTACCGCATCTCACGGAAGCTGGA CAAGGCGGAAACGAGGGAAAAGCACCTGAACTACCTGAACGGAGAGCGTCTGTACGACAATCAGGAAGTATGCCTGTTGT TGCGCATCAGCAAACGCACGCTGCAACGATACCGGAATAACGGGGTGTTGAAGTTCTATTCGATATATCACAAGACATAT TACAAGGAGTCGGACTTGCACGAGTTCATCCGCAACAACTTCGACGAGAACGAGATAAAACGGCAGGCACGTGAGGACAA ACTGTCCGAGAGCTATCCGCTGCCGAAAGAATAA
Upstream 100 bases:
>100_bases GAAAAGCTACATCAGGTTCATGCGTGAGAAAGAAATCATTCTGAAATCATCCGATAACCAGAGCTATTATGTTGTCGGGA ACTTTTAAGGAGGAAAGCGT
Downstream 100 bases:
>100_bases GTCCATGTTTTTGCTTTGTACCGGTGAAACTACTGCCGTGAGGCAGGAAATCCCAAACTGCGTATTGGTGTTTGTCATGG CAATGACTTCATACAGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MLVDKTEFEAWMERIMGELYRISRKLDKAETREKHLNYLNGERLYDNQEVCLLLRISKRTLQRYRNNGVLKFYSIYHKTY YKESDLHEFIRNNFDENEIKRQAREDKLSESYPLPKE
Sequences:
>Translated_117_residues MLVDKTEFEAWMERIMGELYRISRKLDKAETREKHLNYLNGERLYDNQEVCLLLRISKRTLQRYRNNGVLKFYSIYHKTY YKESDLHEFIRNNFDENEIKRQAREDKLSESYPLPKE >Mature_117_residues MLVDKTEFEAWMERIMGELYRISRKLDKAETREKHLNYLNGERLYDNQEVCLLLRISKRTLQRYRNNGVLKFYSIYHKTY YKESDLHEFIRNNFDENEIKRQAREDKLSESYPLPKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14445; Mature: 14445
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVDKTEFEAWMERIMGELYRISRKLDKAETREKHLNYLNGERLYDNQEVCLLLRISKRT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LQRYRNNGVLKFYSIYHKTYYKESDLHEFIRNNFDENEIKRQAREDKLSESYPLPKE HHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLVDKTEFEAWMERIMGELYRISRKLDKAETREKHLNYLNGERLYDNQEVCLLLRISKRT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LQRYRNNGVLKFYSIYHKTYYKESDLHEFIRNNFDENEIKRQAREDKLSESYPLPKE HHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA