| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347738
Identifier: 29347738
GI number: 29347738
Start: 2909831
End: 2910562
Strand: Reverse
Name: 29347738
Synonym: BT_2328
Alternate gene names: NA
Gene position: 2910562-2909831 (Counterclockwise)
Preceding gene: 29347739
Following gene: 29347737
Centisome position: 46.49
GC content: 32.51
Gene sequence:
>732_bases ATGAATAAAGAACAATTTACATTCTATATAGATGAAAGCTGTCATTTAGAACATGATCATTTTCCTGTCATGTGTATTGG TTATATAAAGGTGCCAAAGGAGCAGACTGAAGAAATGAAACAATGCATAAAAGCGATTAAGCGAGGGCATAATATTTTAC ATGAGATAAAATGGAATACAATCAGTAACACCCATATTGATATGTATAAAGAACTTATAGATTACTTTTTTGACTCAAAC ATGGAGTTCAGATGTATTCTTGTTAAGTACAAAGACCGTTTAGACAATTTGTCTTTCAACAACGGCGAGCATGATAATTT TTACTATAAAATGATTTATTACTTGCTTGTCAATCCATACACTAATCCTTCTGCAATGAATAATTACCGTGTATTTTTGG ATATAAAAGATACGAAAGGACGTGCAAAACTTAATAAAATCCAAGAGGTCTTCTCTAATAAGTTTCATGGTAAATCGCCT TTTCTTTCTTTTCAGCATATACGTTCCCATGAATCACAATTTATACAGTTAGCAGATTTTTTCATAGGTGCAGTAACTTA TAAAGCGAGAGGTCTTCACTTGAAGAAAGATGGCAGCTTGGCAAAAAAAGAACTGATCAACTATATTGAAATGAAATCTG GTTATGTTTTGGATGAAGGTACAGAACCGGGAGAAATCAAATTTAATATTTTTGATCACCAACCTCGTAAGCGCAATGAC AGTAGCAGATGA
Upstream 100 bases:
>100_bases TACTTTATACAATGTAAAGATAGATAAGCAAGTATTACCCGAAGTGAGAAAATGGAGAATTCAGTAATTATAATTGGAAA GAATAATATATAGCGACCTT
Downstream 100 bases:
>100_bases ATTAGGAGCTTTAAAACCGTATTTTGCAGACGGGGTTGCAGAAACGGAACAAGAAAAAATGGATGAACTTCATGCCATTT TTCATCGGGATTTTTTTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MNKEQFTFYIDESCHLEHDHFPVMCIGYIKVPKEQTEEMKQCIKAIKRGHNILHEIKWNTISNTHIDMYKELIDYFFDSN MEFRCILVKYKDRLDNLSFNNGEHDNFYYKMIYYLLVNPYTNPSAMNNYRVFLDIKDTKGRAKLNKIQEVFSNKFHGKSP FLSFQHIRSHESQFIQLADFFIGAVTYKARGLHLKKDGSLAKKELINYIEMKSGYVLDEGTEPGEIKFNIFDHQPRKRND SSR
Sequences:
>Translated_243_residues MNKEQFTFYIDESCHLEHDHFPVMCIGYIKVPKEQTEEMKQCIKAIKRGHNILHEIKWNTISNTHIDMYKELIDYFFDSN MEFRCILVKYKDRLDNLSFNNGEHDNFYYKMIYYLLVNPYTNPSAMNNYRVFLDIKDTKGRAKLNKIQEVFSNKFHGKSP FLSFQHIRSHESQFIQLADFFIGAVTYKARGLHLKKDGSLAKKELINYIEMKSGYVLDEGTEPGEIKFNIFDHQPRKRND SSR >Mature_243_residues MNKEQFTFYIDESCHLEHDHFPVMCIGYIKVPKEQTEEMKQCIKAIKRGHNILHEIKWNTISNTHIDMYKELIDYFFDSN MEFRCILVKYKDRLDNLSFNNGEHDNFYYKMIYYLLVNPYTNPSAMNNYRVFLDIKDTKGRAKLNKIQEVFSNKFHGKSP FLSFQHIRSHESQFIQLADFFIGAVTYKARGLHLKKDGSLAKKELINYIEMKSGYVLDEGTEPGEIKFNIFDHQPRKRND SSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28938; Mature: 28938
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKEQFTFYIDESCHLEHDHFPVMCIGYIKVPKEQTEEMKQCIKAIKRGHNILHEIKWNT CCCCEEEEEECCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHCCCCC ISNTHIDMYKELIDYFFDSNMEFRCILVKYKDRLDNLSFNNGEHDNFYYKMIYYLLVNPY CCCCHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHCCCCCCCCCCCCHHHEEEEHHHCCCC TNPSAMNNYRVFLDIKDTKGRAKLNKIQEVFSNKFHGKSPFLSFQHIRSHESQFIQLADF CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH FIGAVTYKARGLHLKKDGSLAKKELINYIEMKSGYVLDEGTEPGEIKFNIFDHQPRKRND HHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCCCCC SSR CCC >Mature Secondary Structure MNKEQFTFYIDESCHLEHDHFPVMCIGYIKVPKEQTEEMKQCIKAIKRGHNILHEIKWNT CCCCEEEEEECCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHCCCCC ISNTHIDMYKELIDYFFDSNMEFRCILVKYKDRLDNLSFNNGEHDNFYYKMIYYLLVNPY CCCCHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHCCCCCCCCCCCCHHHEEEEHHHCCCC TNPSAMNNYRVFLDIKDTKGRAKLNKIQEVFSNKFHGKSPFLSFQHIRSHESQFIQLADF CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH FIGAVTYKARGLHLKKDGSLAKKELINYIEMKSGYVLDEGTEPGEIKFNIFDHQPRKRND HHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCCCCC SSR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA