Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347726

Identifier: 29347726

GI number: 29347726

Start: 2889734

End: 2892400

Strand: Reverse

Name: 29347726

Synonym: BT_2316

Alternate gene names: NA

Gene position: 2892400-2889734 (Counterclockwise)

Preceding gene: 29347727

Following gene: 29347725

Centisome position: 46.2

GC content: 50.88

Gene sequence:

>2667_bases
ATGAAATTTTCCCGTTTTACATCATTTCCCGGCAGGTACGCCTTTTGGCGTCATCTGTTTTCGGCGCTTGTTTCGGGCAG
TATTTGCCTTTTCTCTTGTGAGGATGACATGGATCGTCCTTCACTTTCCCCGCATGTATCTTTCACCTCCGAGATCAGCT
CCTCCTGGACTCCGTCAACCCGTTCCACTACCGATGCTGATGTTCCGCAAGGTACTGTCATCGCCCTGCAGGGAGGCAGC
ACTCCTCTTTACCTGCACACGCTTTACACAGACAGCATTGCTTCACCCTCTTCGGACGATCGTCCGGACACGGCAGCTCT
TACCCGTGCCACTCCCATCAAGAATGACAATATGTACAACAGTTTCGGTGTCTCCGCTTACTCCTACACCGGTTCGTGGA
GCGAAAGCAGAACCCCCGACTACTTCTATAATGCCACTGCCAGCAAGTCCGGCAGTGACTATGTCCTTTCCTCCGCCTAT
TATTGGCCCGGGGCTTCATACAAAATGAGGTTCTTCGCATACGCTCCGAAAGACAACGGGCATTATGTGCTTTCCGGCAG
CGCATATGCCGGTTCTCCTGTCATCAGTGTGACCGTTCCGGTCGATGTCAATGAGCAGGAAGACCTTCTCGTGGCAAAGA
CGGATGAACTGGACGGGAACACCAACGCTGCCGTGCCGCTCACCTTCAGGCATGCCCTGACCGCCATCAGGTTCGTGTGC
GGAGCTGACATGCAGGGAGGTACCGTAAAGAGCGTCAGTTTGAAAAATGTATATTCCAGTGGGGCCTACAACATGGGAAC
GCAGACATGGAGCGGTGTAGGTACTCCCGCCACTTTCCCGCAGACATTGGACAGATCCATTACGGGAATCCCGGACGAAC
CCCTTACTGTCGATGCGCAGACCTTCATGATGGTTCCGCAGACCCTTCCCGACGGCGCGCAACTTGAAGTCGTATTCACT
GATAACTCCAGCATGGACCACACGCTGACTGCCGATCTCAAAGGCACGGTCTGGCCTGTTGGCAAGACCGTCACTTATAA
GATTTCCAGCAGTTCCATAAACTGGACCTACACACTTGCCGTTACCTCCCCGGCCGACTTTACCTATGAAGGCGGTACGC
AGCAATACAATGTGACCAGTTACCGGCAGAACACCAAAGGGGTTAAAGAGGCTGTCACATGGACCGCACAATATTCAGAA
GATGGCGGGGCATCATGGAGCAATACCAGACCCGGCTGGCTGGATGCGTTTACCGTATCCGGAAATGGTGGAGATACTCC
ACAATCATACAATGCAACTGTCATCGCACAGACTGGCGTAGAGGCTAATCCTCAACATACGGCTGCTCTACAGAATGCTT
CGGTCAAAGGTACTGAAACTGTCCCATATAATCTTGCCAACCAGACTAATGGTGGCACAGTGGATGAAAACACCGCCAAC
TGCTACGTTGTCGGTGCTCCGGGATATTACTCTTTCCCTCTGGTATATGGAAATGCCATCAAAGGTGGTACGACCAATAC
GTCCGCATATACCTCTACGGCTCCGTCCGGTACGGATCCGTACGGAACCACTATTCTGAGTCATTTCATCAACCATGCTG
GTAACGCGATCACTGACCCCTATATACGCAACAACGCTGACTGCACGCCTGCTAAAGCAGAACTGGTATGGCAGGACGCA
CCGAATTTGGTTACCGATATAAAATACAACAATACGGGCAACGGCAATATATCTTTCACGGTGGACAAGAATACCATCCG
ACAGGGTAATGCCATCATTGCCATCAAGGATGCCGGCGACAATGTCCTGTGGTCCTGGCATATCTGGGTTACCGATGAAG
ATATCAATAATGCCATTGAAATTACCAATTTCCAGGGTAAGAAGTATAAATTGATGTCTGTCAATCTCGGCTGGTGCGAT
GGAAGTACCACGAATTATGCAGAGCGTAGTTGCAAGGTCAAGTTCACAGCCGGAGGAGAGAGTCAGACAATAACTATCAG
ACAGGCCTCTAAATCAATCGTTGTCGGTGGTAATCATCCTTACTATCAATGGGGACGCAAGGATCCTTTCCTGCCTTCGA
ATGGATTACGCGATATCAATAAAACCTGGTACGACAAAGACGGCAATGCTCACACGGGAAGTCCTAAAACGGAGGACTTT
TCTATCGGCGCCCCTTGTATCACGAATTATATTCTCAAACCGGATGTGATGCAGAGTCCAGATTATGGCGATTGTACATA
TGCAAATCTATGGAGTGCCGATAACAATGTTTATACCGCCAATGACAATTCTGTTGTAAAAACGGTCTATGATCCCTCTC
CTGTGGGCTTCAAACTTCCTCCCAGTAATGTTTTCACTGGATTCACAACAACCGGAGGCAATACAGATAATCCTTCTGAA
ATCAACGGAACGTGGGACGACTCCTCGAAGGGATGGAATTTCTACACTGATCCCTCAAAGAGTAAACCCAACTTCTTCCC
TGCGTCGGGGTCTCGCGACTGTTCCGGTGGCGGGGCGAACAGCGTTGGCTTCTACGGCGTCTGTTGGTCGGCGGTTCCGT
ACAGCCAGTACCACGGTTGCACCCTGGACTTCTCCTCGTCGTCCGTGTACCCGTTGCTCTACTACTCTCGGGCGTGCGGG
TTTGGGTTGCGTTCTTCCCAAGAATAG

Upstream 100 bases:

>100_bases
TCCGGACATTTTCTTTCAAGGGGTATCCATGTCGGAAATCCTTTTTTAACGTTTGTATGATTTTTATTACCGGTACGATT
AATTCATTAAAGTAACAGAT

Downstream 100 bases:

>100_bases
GGAGCGTAGCGACCGTATCCGTTTCATTGGATTATTTTCCCTACGGCTTTAAGGCCGTAGGGATAGTACCGGCGAAGCCG
GTCGATTTTTATAGATATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 888; Mature: 888

Protein sequence:

>888_residues
MKFSRFTSFPGRYAFWRHLFSALVSGSICLFSCEDDMDRPSLSPHVSFTSEISSSWTPSTRSTTDADVPQGTVIALQGGS
TPLYLHTLYTDSIASPSSDDRPDTAALTRATPIKNDNMYNSFGVSAYSYTGSWSESRTPDYFYNATASKSGSDYVLSSAY
YWPGASYKMRFFAYAPKDNGHYVLSGSAYAGSPVISVTVPVDVNEQEDLLVAKTDELDGNTNAAVPLTFRHALTAIRFVC
GADMQGGTVKSVSLKNVYSSGAYNMGTQTWSGVGTPATFPQTLDRSITGIPDEPLTVDAQTFMMVPQTLPDGAQLEVVFT
DNSSMDHTLTADLKGTVWPVGKTVTYKISSSSINWTYTLAVTSPADFTYEGGTQQYNVTSYRQNTKGVKEAVTWTAQYSE
DGGASWSNTRPGWLDAFTVSGNGGDTPQSYNATVIAQTGVEANPQHTAALQNASVKGTETVPYNLANQTNGGTVDENTAN
CYVVGAPGYYSFPLVYGNAIKGGTTNTSAYTSTAPSGTDPYGTTILSHFINHAGNAITDPYIRNNADCTPAKAELVWQDA
PNLVTDIKYNNTGNGNISFTVDKNTIRQGNAIIAIKDAGDNVLWSWHIWVTDEDINNAIEITNFQGKKYKLMSVNLGWCD
GSTTNYAERSCKVKFTAGGESQTITIRQASKSIVVGGNHPYYQWGRKDPFLPSNGLRDINKTWYDKDGNAHTGSPKTEDF
SIGAPCITNYILKPDVMQSPDYGDCTYANLWSADNNVYTANDNSVVKTVYDPSPVGFKLPPSNVFTGFTTTGGNTDNPSE
INGTWDDSSKGWNFYTDPSKSKPNFFPASGSRDCSGGGANSVGFYGVCWSAVPYSQYHGCTLDFSSSSVYPLLYYSRACG
FGLRSSQE

Sequences:

>Translated_888_residues
MKFSRFTSFPGRYAFWRHLFSALVSGSICLFSCEDDMDRPSLSPHVSFTSEISSSWTPSTRSTTDADVPQGTVIALQGGS
TPLYLHTLYTDSIASPSSDDRPDTAALTRATPIKNDNMYNSFGVSAYSYTGSWSESRTPDYFYNATASKSGSDYVLSSAY
YWPGASYKMRFFAYAPKDNGHYVLSGSAYAGSPVISVTVPVDVNEQEDLLVAKTDELDGNTNAAVPLTFRHALTAIRFVC
GADMQGGTVKSVSLKNVYSSGAYNMGTQTWSGVGTPATFPQTLDRSITGIPDEPLTVDAQTFMMVPQTLPDGAQLEVVFT
DNSSMDHTLTADLKGTVWPVGKTVTYKISSSSINWTYTLAVTSPADFTYEGGTQQYNVTSYRQNTKGVKEAVTWTAQYSE
DGGASWSNTRPGWLDAFTVSGNGGDTPQSYNATVIAQTGVEANPQHTAALQNASVKGTETVPYNLANQTNGGTVDENTAN
CYVVGAPGYYSFPLVYGNAIKGGTTNTSAYTSTAPSGTDPYGTTILSHFINHAGNAITDPYIRNNADCTPAKAELVWQDA
PNLVTDIKYNNTGNGNISFTVDKNTIRQGNAIIAIKDAGDNVLWSWHIWVTDEDINNAIEITNFQGKKYKLMSVNLGWCD
GSTTNYAERSCKVKFTAGGESQTITIRQASKSIVVGGNHPYYQWGRKDPFLPSNGLRDINKTWYDKDGNAHTGSPKTEDF
SIGAPCITNYILKPDVMQSPDYGDCTYANLWSADNNVYTANDNSVVKTVYDPSPVGFKLPPSNVFTGFTTTGGNTDNPSE
INGTWDDSSKGWNFYTDPSKSKPNFFPASGSRDCSGGGANSVGFYGVCWSAVPYSQYHGCTLDFSSSSVYPLLYYSRACG
FGLRSSQE
>Mature_888_residues
MKFSRFTSFPGRYAFWRHLFSALVSGSICLFSCEDDMDRPSLSPHVSFTSEISSSWTPSTRSTTDADVPQGTVIALQGGS
TPLYLHTLYTDSIASPSSDDRPDTAALTRATPIKNDNMYNSFGVSAYSYTGSWSESRTPDYFYNATASKSGSDYVLSSAY
YWPGASYKMRFFAYAPKDNGHYVLSGSAYAGSPVISVTVPVDVNEQEDLLVAKTDELDGNTNAAVPLTFRHALTAIRFVC
GADMQGGTVKSVSLKNVYSSGAYNMGTQTWSGVGTPATFPQTLDRSITGIPDEPLTVDAQTFMMVPQTLPDGAQLEVVFT
DNSSMDHTLTADLKGTVWPVGKTVTYKISSSSINWTYTLAVTSPADFTYEGGTQQYNVTSYRQNTKGVKEAVTWTAQYSE
DGGASWSNTRPGWLDAFTVSGNGGDTPQSYNATVIAQTGVEANPQHTAALQNASVKGTETVPYNLANQTNGGTVDENTAN
CYVVGAPGYYSFPLVYGNAIKGGTTNTSAYTSTAPSGTDPYGTTILSHFINHAGNAITDPYIRNNADCTPAKAELVWQDA
PNLVTDIKYNNTGNGNISFTVDKNTIRQGNAIIAIKDAGDNVLWSWHIWVTDEDINNAIEITNFQGKKYKLMSVNLGWCD
GSTTNYAERSCKVKFTAGGESQTITIRQASKSIVVGGNHPYYQWGRKDPFLPSNGLRDINKTWYDKDGNAHTGSPKTEDF
SIGAPCITNYILKPDVMQSPDYGDCTYANLWSADNNVYTANDNSVVKTVYDPSPVGFKLPPSNVFTGFTTTGGNTDNPSE
INGTWDDSSKGWNFYTDPSKSKPNFFPASGSRDCSGGGANSVGFYGVCWSAVPYSQYHGCTLDFSSSSVYPLLYYSRACG
FGLRSSQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 96088; Mature: 96088

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSRFTSFPGRYAFWRHLFSALVSGSICLFSCEDDMDRPSLSPHVSFTSEISSSWTPST
CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEHHHHCCCCCCCC
RSTTDADVPQGTVIALQGGSTPLYLHTLYTDSIASPSSDDRPDTAALTRATPIKNDNMYN
CCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCC
SFGVSAYSYTGSWSESRTPDYFYNATASKSGSDYVLSSAYYWPGASYKMRFFAYAPKDNG
CCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCC
HYVLSGSAYAGSPVISVTVPVDVNEQEDLLVAKTDELDGNTNAAVPLTFRHALTAIRFVC
CEEEECCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHH
GADMQGGTVKSVSLKNVYSSGAYNMGTQTWSGVGTPATFPQTLDRSITGIPDEPLTVDAQ
CCCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCC
TFMMVPQTLPDGAQLEVVFTDNSSMDHTLTADLKGTVWPVGKTVTYKISSSSINWTYTLA
EEEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEECCCEEEEEEECCCCEEEEEEE
VTSPADFTYEGGTQQYNVTSYRQNTKGVKEAVTWTAQYSEDGGASWSNTRPGWLDAFTVS
EECCCCEEECCCCEEEEEHHHHCCCCCHHHHEEEEEEECCCCCCCCCCCCCCEEEEEEEE
GNGGDTPQSYNATVIAQTGVEANPQHTAALQNASVKGTETVPYNLANQTNGGTVDENTAN
CCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCC
CYVVGAPGYYSFPLVYGNAIKGGTTNTSAYTSTAPSGTDPYGTTILSHFINHAGNAITDP
EEEEECCCCEECEEEECCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCC
YIRNNADCTPAKAELVWQDAPNLVTDIKYNNTGNGNISFTVDKNTIRQGNAIIAIKDAGD
HHCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCEEEEEEECHHCCCCCEEEEEEECCC
NVLWSWHIWVTDEDINNAIEITNFQGKKYKLMSVNLGWCDGSTTNYAERSCKVKFTAGGE
CEEEEEEEEEECCCCCCEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEECCC
SQTITIRQASKSIVVGGNHPYYQWGRKDPFLPSNGLRDINKTWYDKDGNAHTGSPKTEDF
CEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCE
SIGAPCITNYILKPDVMQSPDYGDCTYANLWSADNNVYTANDNSVVKTVYDPSPVGFKLP
ECCCHHHHHEEECCCCCCCCCCCCCEEEEEECCCCCEEECCCCCEEEEEECCCCCCEECC
PSNVFTGFTTTGGNTDNPSEINGTWDDSSKGWNFYTDPSKSKPNFFPASGSRDCSGGGAN
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEECCCCCCCCCCCCCC
SVGFYGVCWSAVPYSQYHGCTLDFSSSSVYPLLYYSRACGFGLRSSQE
CCCEEEEEECCCCCHHHCCEEEEECCCCCEEEEEEHHHCCCCCCCCCC
>Mature Secondary Structure
MKFSRFTSFPGRYAFWRHLFSALVSGSICLFSCEDDMDRPSLSPHVSFTSEISSSWTPST
CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEHHHHCCCCCCCC
RSTTDADVPQGTVIALQGGSTPLYLHTLYTDSIASPSSDDRPDTAALTRATPIKNDNMYN
CCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCC
SFGVSAYSYTGSWSESRTPDYFYNATASKSGSDYVLSSAYYWPGASYKMRFFAYAPKDNG
CCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCC
HYVLSGSAYAGSPVISVTVPVDVNEQEDLLVAKTDELDGNTNAAVPLTFRHALTAIRFVC
CEEEECCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHH
GADMQGGTVKSVSLKNVYSSGAYNMGTQTWSGVGTPATFPQTLDRSITGIPDEPLTVDAQ
CCCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEECCC
TFMMVPQTLPDGAQLEVVFTDNSSMDHTLTADLKGTVWPVGKTVTYKISSSSINWTYTLA
EEEEECCCCCCCCEEEEEECCCCCCCEEEEECCCCEEEECCCEEEEEEECCCCEEEEEEE
VTSPADFTYEGGTQQYNVTSYRQNTKGVKEAVTWTAQYSEDGGASWSNTRPGWLDAFTVS
EECCCCEEECCCCEEEEEHHHHCCCCCHHHHEEEEEEECCCCCCCCCCCCCCEEEEEEEE
GNGGDTPQSYNATVIAQTGVEANPQHTAALQNASVKGTETVPYNLANQTNGGTVDENTAN
CCCCCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCC
CYVVGAPGYYSFPLVYGNAIKGGTTNTSAYTSTAPSGTDPYGTTILSHFINHAGNAITDP
EEEEECCCCEECEEEECCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCC
YIRNNADCTPAKAELVWQDAPNLVTDIKYNNTGNGNISFTVDKNTIRQGNAIIAIKDAGD
HHCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCEEEEEEECHHCCCCCEEEEEEECCC
NVLWSWHIWVTDEDINNAIEITNFQGKKYKLMSVNLGWCDGSTTNYAERSCKVKFTAGGE
CEEEEEEEEEECCCCCCEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEECCC
SQTITIRQASKSIVVGGNHPYYQWGRKDPFLPSNGLRDINKTWYDKDGNAHTGSPKTEDF
CEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCE
SIGAPCITNYILKPDVMQSPDYGDCTYANLWSADNNVYTANDNSVVKTVYDPSPVGFKLP
ECCCHHHHHEEECCCCCCCCCCCCCEEEEEECCCCCEEECCCCCEEEEEECCCCCCEECC
PSNVFTGFTTTGGNTDNPSEINGTWDDSSKGWNFYTDPSKSKPNFFPASGSRDCSGGGAN
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEECCCCCCCCCCCCCC
SVGFYGVCWSAVPYSQYHGCTLDFSSSSVYPLLYYSRACGFGLRSSQE
CCCEEEEEECCCCCHHHCCEEEEECCCCCEEEEEEHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA