| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347698
Identifier: 29347698
GI number: 29347698
Start: 2864699
End: 2865283
Strand: Reverse
Name: 29347698
Synonym: BT_2288
Alternate gene names: NA
Gene position: 2865283-2864699 (Counterclockwise)
Preceding gene: 29347699
Following gene: 29347697
Centisome position: 45.77
GC content: 49.74
Gene sequence:
>585_bases ATGAAAAGGGTATCTGTTATTATATGTATGTTTTTGTACTTTGTCCTGACGGACAAGGCACATGCCCAACGTTGCCTGCC CGGTACAAAAGGGCTGCGTATTACCGCCGGCATGACGGATGGCTTTCACACTGCGGACAAACGTAACGAGCTGGGTTACC ATTTCGGGATGGGAATGGACAGGTATGTGAACGGCTGCCATAAGTGGGTATTCAGTGGCGAGTATCTCCAGAAGTATTAT CCATACAAGGACATACGTGTCCCGGTTTCCCAATTCACTGCGGAAGGCGGCTATTATTATAATTTCCTTTCGGATGCCAA CAAGGTGTTTCTCTGCTATGCCGGCGGTTCGGTGTTGGCGGGATATGAAACCGTGAATTGGGGCACAGGCATGCTGTTCG ATGGTTCACGCCTGTGTGTCGGGGATGCATTTGTCTATGGCGGTGCGGTATCGCTGGAGATAGAAACCTACCTTGCCAAC CAGGTGGTATTGCTGTTCCATGCCCGTGAGCGTTGCCTCTGGGGAAATGACAGCGGACACTTTCATTTCCAGTTCGGGGT GGGATTGAAAATTATTTTGAATTGA
Upstream 100 bases:
>100_bases GAGATGAACGAACAGAACGGGGGAAGGCATCAGCGGTTTATTCTGACCAACGCCGAGCTGATCCGTGCCAGAGTCATTAA CGAGCTGAAGGTGAAATAGT
Downstream 100 bases:
>100_bases TAAAACAATAATAGAATGAAAAAGATGATTGAAAGCATGATTATAGCAGGTGGTATGCTGGTAGCCTTGTTATATATGAC CGCCTGTTCTGACAAATTGG
Product: conjugate transposon protein
Products: NA
Alternate protein names: Conserved Protein Found In Conjugate Transposon TraO; Transfer Complex Protein TraO; Conjugate Transposon Protein; Conjugative Transposon Protein Trao
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKRVSVIICMFLYFVLTDKAHAQRCLPGTKGLRITAGMTDGFHTADKRNELGYHFGMGMDRYVNGCHKWVFSGEYLQKYY PYKDIRVPVSQFTAEGGYYYNFLSDANKVFLCYAGGSVLAGYETVNWGTGMLFDGSRLCVGDAFVYGGAVSLEIETYLAN QVVLLFHARERCLWGNDSGHFHFQFGVGLKIILN
Sequences:
>Translated_194_residues MKRVSVIICMFLYFVLTDKAHAQRCLPGTKGLRITAGMTDGFHTADKRNELGYHFGMGMDRYVNGCHKWVFSGEYLQKYY PYKDIRVPVSQFTAEGGYYYNFLSDANKVFLCYAGGSVLAGYETVNWGTGMLFDGSRLCVGDAFVYGGAVSLEIETYLAN QVVLLFHARERCLWGNDSGHFHFQFGVGLKIILN >Mature_194_residues MKRVSVIICMFLYFVLTDKAHAQRCLPGTKGLRITAGMTDGFHTADKRNELGYHFGMGMDRYVNGCHKWVFSGEYLQKYY PYKDIRVPVSQFTAEGGYYYNFLSDANKVFLCYAGGSVLAGYETVNWGTGMLFDGSRLCVGDAFVYGGAVSLEIETYLAN QVVLLFHARERCLWGNDSGHFHFQFGVGLKIILN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21875; Mature: 21875
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVSVIICMFLYFVLTDKAHAQRCLPGTKGLRITAGMTDGFHTADKRNELGYHFGMGMD CCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCHH RYVNGCHKWVFSGEYLQKYYPYKDIRVPVSQFTAEGGYYYNFLSDANKVFLCYAGGSVLA HHHHHHHHHEECCHHHHHHCCCCCEECCHHHEECCCCEEEEEECCCCEEEEEEECCCEEE GYETVNWGTGMLFDGSRLCVGDAFVYGGAVSLEIETYLANQVVLLFHARERCLWGNDSGH CEEEECCCCCEEECCCEEEEECEEEECCEEEEEEEEECCCEEEEEEEECCCEEECCCCCE FHFQFGVGLKIILN EEEEECCCEEEEEC >Mature Secondary Structure MKRVSVIICMFLYFVLTDKAHAQRCLPGTKGLRITAGMTDGFHTADKRNELGYHFGMGMD CCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCHH RYVNGCHKWVFSGEYLQKYYPYKDIRVPVSQFTAEGGYYYNFLSDANKVFLCYAGGSVLA HHHHHHHHHEECCHHHHHHCCCCCEECCHHHEECCCCEEEEEECCCCEEEEEEECCCEEE GYETVNWGTGMLFDGSRLCVGDAFVYGGAVSLEIETYLANQVVLLFHARERCLWGNDSGH CEEEECCCCCEEECCCEEEEECEEEECCEEEEEEEEECCCEEEEEEEECCCEEECCCCCE FHFQFGVGLKIILN EEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA