| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347691
Identifier: 29347691
GI number: 29347691
Start: 2861156
End: 2861428
Strand: Reverse
Name: 29347691
Synonym: BT_2281
Alternate gene names: NA
Gene position: 2861428-2861156 (Counterclockwise)
Preceding gene: 29347697
Following gene: 29347684
Centisome position: 45.71
GC content: 44.32
Gene sequence:
>273_bases ATGGATTTACAATCGACTCCCCTGAAAGGAGTAGTCCGGTCTTCAGAAGATGGGCTTTTCTATCTGTTTCCCATTCAGAG TCTATCTACATTGCAAGAGATGAAAGGGCATTTGACCTGTGCGATAGATGTCTTGAGCAATCCGGATGAAAGTGATGTGG AAAAGCGTTTGGACGCAGTTCGGACATTGAACAGCCTTGTGGCTGCATTGAGTGTTAATGACGGTGATCACTATGATGTG ATAGATACTGCCTTTGAGGAGATCAGAGAGTAA
Upstream 100 bases:
>100_bases TTGACGTAACCTGTCGGTTCACTCTGTATTGAGCGTTTGGCGATGCTTTGGACTTGTGACTGGCAGCGTTACGTCAATTT AATATACTAACGTTATTGTT
Downstream 100 bases:
>100_bases AAAAACAGAGCGATATAATAAAAGCCTTCCTATTTCAAAACCGGAAAAAAGAAAGGTGTTGTACTGTCCAATGTGTGATT CATCGCGCTTGTTTGTACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MDLQSTPLKGVVRSSEDGLFYLFPIQSLSTLQEMKGHLTCAIDVLSNPDESDVEKRLDAVRTLNSLVAALSVNDGDHYDV IDTAFEEIRE
Sequences:
>Translated_90_residues MDLQSTPLKGVVRSSEDGLFYLFPIQSLSTLQEMKGHLTCAIDVLSNPDESDVEKRLDAVRTLNSLVAALSVNDGDHYDV IDTAFEEIRE >Mature_90_residues MDLQSTPLKGVVRSSEDGLFYLFPIQSLSTLQEMKGHLTCAIDVLSNPDESDVEKRLDAVRTLNSLVAALSVNDGDHYDV IDTAFEEIRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9984; Mature: 9984
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLQSTPLKGVVRSSEDGLFYLFPIQSLSTLQEMKGHLTCAIDVLSNPDESDVEKRLDAV CCCCCCCCHHHHCCCCCCEEEEECCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHH RTLNSLVAALSVNDGDHYDVIDTAFEEIRE HHHHHHHHHHCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MDLQSTPLKGVVRSSEDGLFYLFPIQSLSTLQEMKGHLTCAIDVLSNPDESDVEKRLDAV CCCCCCCCHHHHCCCCCCEEEEECCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHH RTLNSLVAALSVNDGDHYDVIDTAFEEIRE HHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA