| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347654
Identifier: 29347654
GI number: 29347654
Start: 2812693
End: 2813778
Strand: Reverse
Name: 29347654
Synonym: BT_2244
Alternate gene names: NA
Gene position: 2813778-2812693 (Counterclockwise)
Preceding gene: 29347655
Following gene: 29347650
Centisome position: 44.95
GC content: 42.82
Gene sequence:
>1086_bases ATGAAGAAGATCAAGATTTTTATTGCATCATCGGCGGAGTTGAATGAAGACAAACAGATGTTTGACTTGTACTTTTCGGA TAAGAATAAACTTTATCGTGACCGGAATATAGACTTCGATCAGCGTACGTGGATGGACTTCAGCAGTTCGCTGAATGAAG GTCGTCTGCAGGATCGCTATAATGACTATATCCGCGAATGTGATATTGTGATTTTTCTGTTCCACACACGGATGGGGCGC TATACCAAAGAAGAACTGGAAGTGGCCCATGAAATATATCTGAAGACTAAGGCTGCAAAACCTAAAATATTTGTCTATTT CAAGGAGGAGGGAATCGTTGATGAGTCTCTCAAAGATTTTAAATCTTATTGCGAGAAGAATCTCGGACACTTCTGCGACT TGTATACCAATTATGATGATTTGCGTCTCAAGTTCGACAAACAATTGCAGATTTTGGAGAATGAAGGCTTTATCAAGCCC GATCCGGTAGATGTGAAACGGACATTGAGGTTCGTATTATTGTATGTCCTTGTACCTGTACTGGTGGTGGCACTGGCTTT CTTTGCTTTCTATTATTATTCGCCGGTCACTTCCACGGTGCGTCTTACGGATACTTCCAAGTCTTCTTTGCCTTTTTATG GCGCTGATATAACATTGGAGTATGCCGATAAGAGCGAAACCCGTCATGTGGACAGACTTTCTGACGAGGTTGTCTTCAAA GAAATTCACACTAAATATCTGGGTGAGAATGCCCGTCTTAAGATAGAATCGAAAGGATATGTGACGGTAGATACGGTACT GAGCCTGGAAAAGAATGTGACTCTTGGCATCAGTCGTGATTCTTCATTGGCGATGATTTTCGGTACTGTGAAAGATGAGG ATAACCGTCCGCTGGCGGATGCTACTGTTCAAGTGCTGGACATGAAAACGGTGTCTGACGGAATGGGAAACTTCCAACTG CCCATACCTGCCGAGAAACAAAAAGAGGAGCAACGGGTGACGGTATACAAGGATGGATATCAATTATGGGACTTCACCGG ACCGGTATCCGATAAAGTCTCATGGAAGATTATTCTGAGAAAGTAA
Upstream 100 bases:
>100_bases AAAACTGAAAGGAGAACTGAAGAAAAAGGCACAGTTGGTTTTCGAACGAATCGAAGACCGAAAGAAATGGATCAGTATAA AGGAAAAAATATAGAAACAG
Downstream 100 bases:
>100_bases TGCCTTTACTTTCTGTAAATGCTATTATTGTTGGTCCGGTAGTCATTGATAAGGTAGAGCAGAACGGCATCGTTAGGCAG CGTGCCGCTCTTATACTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MKKIKIFIASSAELNEDKQMFDLYFSDKNKLYRDRNIDFDQRTWMDFSSSLNEGRLQDRYNDYIRECDIVIFLFHTRMGR YTKEELEVAHEIYLKTKAAKPKIFVYFKEEGIVDESLKDFKSYCEKNLGHFCDLYTNYDDLRLKFDKQLQILENEGFIKP DPVDVKRTLRFVLLYVLVPVLVVALAFFAFYYYSPVTSTVRLTDTSKSSLPFYGADITLEYADKSETRHVDRLSDEVVFK EIHTKYLGENARLKIESKGYVTVDTVLSLEKNVTLGISRDSSLAMIFGTVKDEDNRPLADATVQVLDMKTVSDGMGNFQL PIPAEKQKEEQRVTVYKDGYQLWDFTGPVSDKVSWKIILRK
Sequences:
>Translated_361_residues MKKIKIFIASSAELNEDKQMFDLYFSDKNKLYRDRNIDFDQRTWMDFSSSLNEGRLQDRYNDYIRECDIVIFLFHTRMGR YTKEELEVAHEIYLKTKAAKPKIFVYFKEEGIVDESLKDFKSYCEKNLGHFCDLYTNYDDLRLKFDKQLQILENEGFIKP DPVDVKRTLRFVLLYVLVPVLVVALAFFAFYYYSPVTSTVRLTDTSKSSLPFYGADITLEYADKSETRHVDRLSDEVVFK EIHTKYLGENARLKIESKGYVTVDTVLSLEKNVTLGISRDSSLAMIFGTVKDEDNRPLADATVQVLDMKTVSDGMGNFQL PIPAEKQKEEQRVTVYKDGYQLWDFTGPVSDKVSWKIILRK >Mature_361_residues MKKIKIFIASSAELNEDKQMFDLYFSDKNKLYRDRNIDFDQRTWMDFSSSLNEGRLQDRYNDYIRECDIVIFLFHTRMGR YTKEELEVAHEIYLKTKAAKPKIFVYFKEEGIVDESLKDFKSYCEKNLGHFCDLYTNYDDLRLKFDKQLQILENEGFIKP DPVDVKRTLRFVLLYVLVPVLVVALAFFAFYYYSPVTSTVRLTDTSKSSLPFYGADITLEYADKSETRHVDRLSDEVVFK EIHTKYLGENARLKIESKGYVTVDTVLSLEKNVTLGISRDSSLAMIFGTVKDEDNRPLADATVQVLDMKTVSDGMGNFQL PIPAEKQKEEQRVTVYKDGYQLWDFTGPVSDKVSWKIILRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42168; Mature: 42168
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIKIFIASSAELNEDKQMFDLYFSDKNKLYRDRNIDFDQRTWMDFSSSLNEGRLQDRY CCEEEEEEECCCCCCCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHCCCCCCHHHHHH NDYIRECDIVIFLFHTRMGRYTKEELEVAHEIYLKTKAAKPKIFVYFKEEGIVDESLKDF HHHHHHHCEEEEEEEHHCCCCCHHHHHHHHHHHHEECCCCCEEEEEECCCCCCHHHHHHH KSYCEKNLGHFCDLYTNYDDLRLKFDKQLQILENEGFIKPDPVDVKRTLRFVLLYVLVPV HHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH LVVALAFFAFYYYSPVTSTVRLTDTSKSSLPFYGADITLEYADKSETRHVDRLSDEVVFK HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEECCEEEEEECCCCCHHHHHHHHHHHHHH EIHTKYLGENARLKIESKGYVTVDTVLSLEKNVTLGISRDSSLAMIFGTVKDEDNRPLAD HHHHHHCCCCCEEEECCCCCEEEEHEEECCCCEEEEECCCCCEEEEEEEEECCCCCCHHH ATVQVLDMKTVSDGMGNFQLPIPAEKQKEEQRVTVYKDGYQLWDFTGPVSDKVSWKIILR HHEEEEEEEHHHCCCCCEECCCCCHHCCCCCEEEEEECCEEEEEECCCCCCCEEEEEEEE K C >Mature Secondary Structure MKKIKIFIASSAELNEDKQMFDLYFSDKNKLYRDRNIDFDQRTWMDFSSSLNEGRLQDRY CCEEEEEEECCCCCCCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHCCCCCCHHHHHH NDYIRECDIVIFLFHTRMGRYTKEELEVAHEIYLKTKAAKPKIFVYFKEEGIVDESLKDF HHHHHHHCEEEEEEEHHCCCCCHHHHHHHHHHHHEECCCCCEEEEEECCCCCCHHHHHHH KSYCEKNLGHFCDLYTNYDDLRLKFDKQLQILENEGFIKPDPVDVKRTLRFVLLYVLVPV HHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH LVVALAFFAFYYYSPVTSTVRLTDTSKSSLPFYGADITLEYADKSETRHVDRLSDEVVFK HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEECCEEEEEECCCCCHHHHHHHHHHHHHH EIHTKYLGENARLKIESKGYVTVDTVLSLEKNVTLGISRDSSLAMIFGTVKDEDNRPLAD HHHHHHCCCCCEEEECCCCCEEEEHEEECCCCEEEEECCCCCEEEEEEEEECCCCCCHHH ATVQVLDMKTVSDGMGNFQLPIPAEKQKEEQRVTVYKDGYQLWDFTGPVSDKVSWKIILR HHEEEEEEEHHHCCCCCEECCCCCHHCCCCCEEEEEECCEEEEEECCCCCCCEEEEEEEE K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA