Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347633

Identifier: 29347633

GI number: 29347633

Start: 2791544

End: 2793331

Strand: Reverse

Name: 29347633

Synonym: BT_2223

Alternate gene names: NA

Gene position: 2793331-2791544 (Counterclockwise)

Preceding gene: 29347635

Following gene: 29347631

Centisome position: 44.62

GC content: 33.0

Gene sequence:

>1788_bases
ATGAATGTAAACTATGTCTATGGAATCATCTTCCTGTTTTTAACATCTTGCCTTTCTCCCACAGATAGGGTAATTCCTTC
TTTATTGCATGCAGATTCTTTGATAGAAGTTGGATGTGCAGATAGTGCATTGAGTATATTGGAAGGTGTGAATCTTGCAG
AGTTGTCTACTATACAGTCTAGAGCTAAGTATGCCCTATTGTTAACACAAGCCAAAGATAAGAACTATATTACTCATACG
GATGATTCGTTAATTCGTGTCGCTGTAGATTATTATGATACTTCCGATGATATTACCCTACGGGCAAAAGCTCATTATTA
TCTTGGACGAGTTTGTCAAGACAGAGGTGATATTGAAGGAACTGTACGTGAATTTTTGGTGGCAATGCCTTTAGCTGAGA
AAGTGGATAATTATGATTTGAATATTCTATTGAAAAGTAATTTGGGTTTATTGTTTTGGCAGCATGGATTGCAGGAAGAG
GCTGATTCTCTTTATAGACAGACTATTGAATTGGCAGAAACACATCATGATTCATTGCGTTTAGCCGTAGTGCTAGTAAG
TTGTGCAGATATTTGCATGGAGCGAGGAGAAGAATATTATACAGATGCAGAAAAATATTTAAAACGAGCCCTAAAGCTAA
TAAAAGATACAGATAAACAACATATTAAGGAGCTTGTGTTTAGTTCTCTTAGTTATCTTCTAGAATATCAAGGGAAATCA
CGCGAAGCTATATTGTTTGCAAATAAAGGTATGCGATTGGTGTTAGACAGTTCTGAAAGATATGGTTACTATCTAGTTAT
TGGGAGTGCTTATTTGCAATTGGAACAATATGATTCAGCCTCTGTTTATTTGAATAGAGGTATATCTTCTGATAATTATT
ATGCAAAAACAAATGCATATATGAAATTATCAGAAATGGCAACGAAGTTGGGGAAAAAAAATGAAGCATTGGAATACGAA
ACTTTATATGCTATATATAAGGATTCCATGAAATTGGTCGAGCAACCGGTTGAGGTAGTTTCTTCTTTGAAGGATGTGTT
ATATCATCAATCAACGGAACGCTATGAATCATTTTTGACTCAGTATCGTTTTTGTCTATTGTTACTTGTCCTATTGTTTA
TTATTACGATTTGTTTCTTTTTGCAAAGGCGTAGAAAAAGGAAGGAAGAAATGGCACAATTAGTCAATAAACGACAATTA
TTGTATAAAAGTATAGAGACTATCAAGAAAGAGTTAGAGAAAAAAAATATAGAAATAAAAGAAATACAGCAACATTGTGA
ATATTTAGAGTCAGATGTTAACTCCAAAGCACAATTAGATAGTTGTCTTAATGAACTATTGGAACAATACCATTTAATGC
AAGAAGATTTAGAACGTCGGCTTGTAGAAAGAGATGAGGAAGTAAAGCAATTGAGAAATCTGAATCTGAAATTTATATTA
ATGTCTTCTCCTGTTTATCAAATGTTGATAGAATTGTGTGAGTATAATAAACTTAATCCTGATGGAATGAAGAAGATTAC
TAATGATGAATGGGATATTTTATTGCATGAAATAGATATGGCATCTTTGGGATTTGTAGAAAGATTAAGCACTAAATATG
AGTATTTATTGGAGGAAGATATTCGTTTTTGCTGTTTAGTTAGGTTGGATTTTAAATATGCCGATATTGCCAGTCTTTGG
GGATGCACTTCTGCTGCCGTATATAAAAGAAGTTGGTCTGTATTGGAGAAGATGGGTTTAAATAAAGATAAGAAAATAAA
ATTGGTTGATATATTACGCAAAATCTAA

Upstream 100 bases:

>100_bases
CTTGGTTAAACATTTTTAGGTTTAAGTTGCAAATATATTATAATTCTTTTACTTTTGCTTCTGCTCTCAAACAAAACTTA
TTCGAAATCTATTAAAAGTG

Downstream 100 bases:

>100_bases
GTTATTGTATTATTACATTAGTGTCCCATTAAAATTGGGACGAATTAAAAATTAAATAAACTTGGCCCATTTGGTCCGAA
TCGTTCTTTGTCATTTTGAA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; TPR-Domain-Containing Protein; Transmembrane Protein; TPR Domain-Containing Protein; Regulatory Protein Luxr; Tetratricopeptide Repeat Protein; Lipoprotein

Number of amino acids: Translated: 595; Mature: 595

Protein sequence:

>595_residues
MNVNYVYGIIFLFLTSCLSPTDRVIPSLLHADSLIEVGCADSALSILEGVNLAELSTIQSRAKYALLLTQAKDKNYITHT
DDSLIRVAVDYYDTSDDITLRAKAHYYLGRVCQDRGDIEGTVREFLVAMPLAEKVDNYDLNILLKSNLGLLFWQHGLQEE
ADSLYRQTIELAETHHDSLRLAVVLVSCADICMERGEEYYTDAEKYLKRALKLIKDTDKQHIKELVFSSLSYLLEYQGKS
REAILFANKGMRLVLDSSERYGYYLVIGSAYLQLEQYDSASVYLNRGISSDNYYAKTNAYMKLSEMATKLGKKNEALEYE
TLYAIYKDSMKLVEQPVEVVSSLKDVLYHQSTERYESFLTQYRFCLLLLVLLFIITICFFLQRRRKRKEEMAQLVNKRQL
LYKSIETIKKELEKKNIEIKEIQQHCEYLESDVNSKAQLDSCLNELLEQYHLMQEDLERRLVERDEEVKQLRNLNLKFIL
MSSPVYQMLIELCEYNKLNPDGMKKITNDEWDILLHEIDMASLGFVERLSTKYEYLLEEDIRFCCLVRLDFKYADIASLW
GCTSAAVYKRSWSVLEKMGLNKDKKIKLVDILRKI

Sequences:

>Translated_595_residues
MNVNYVYGIIFLFLTSCLSPTDRVIPSLLHADSLIEVGCADSALSILEGVNLAELSTIQSRAKYALLLTQAKDKNYITHT
DDSLIRVAVDYYDTSDDITLRAKAHYYLGRVCQDRGDIEGTVREFLVAMPLAEKVDNYDLNILLKSNLGLLFWQHGLQEE
ADSLYRQTIELAETHHDSLRLAVVLVSCADICMERGEEYYTDAEKYLKRALKLIKDTDKQHIKELVFSSLSYLLEYQGKS
REAILFANKGMRLVLDSSERYGYYLVIGSAYLQLEQYDSASVYLNRGISSDNYYAKTNAYMKLSEMATKLGKKNEALEYE
TLYAIYKDSMKLVEQPVEVVSSLKDVLYHQSTERYESFLTQYRFCLLLLVLLFIITICFFLQRRRKRKEEMAQLVNKRQL
LYKSIETIKKELEKKNIEIKEIQQHCEYLESDVNSKAQLDSCLNELLEQYHLMQEDLERRLVERDEEVKQLRNLNLKFIL
MSSPVYQMLIELCEYNKLNPDGMKKITNDEWDILLHEIDMASLGFVERLSTKYEYLLEEDIRFCCLVRLDFKYADIASLW
GCTSAAVYKRSWSVLEKMGLNKDKKIKLVDILRKI
>Mature_595_residues
MNVNYVYGIIFLFLTSCLSPTDRVIPSLLHADSLIEVGCADSALSILEGVNLAELSTIQSRAKYALLLTQAKDKNYITHT
DDSLIRVAVDYYDTSDDITLRAKAHYYLGRVCQDRGDIEGTVREFLVAMPLAEKVDNYDLNILLKSNLGLLFWQHGLQEE
ADSLYRQTIELAETHHDSLRLAVVLVSCADICMERGEEYYTDAEKYLKRALKLIKDTDKQHIKELVFSSLSYLLEYQGKS
REAILFANKGMRLVLDSSERYGYYLVIGSAYLQLEQYDSASVYLNRGISSDNYYAKTNAYMKLSEMATKLGKKNEALEYE
TLYAIYKDSMKLVEQPVEVVSSLKDVLYHQSTERYESFLTQYRFCLLLLVLLFIITICFFLQRRRKRKEEMAQLVNKRQL
LYKSIETIKKELEKKNIEIKEIQQHCEYLESDVNSKAQLDSCLNELLEQYHLMQEDLERRLVERDEEVKQLRNLNLKFIL
MSSPVYQMLIELCEYNKLNPDGMKKITNDEWDILLHEIDMASLGFVERLSTKYEYLLEEDIRFCCLVRLDFKYADIASLW
GCTSAAVYKRSWSVLEKMGLNKDKKIKLVDILRKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69312; Mature: 69312

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVNYVYGIIFLFLTSCLSPTDRVIPSLLHADSLIEVGCADSALSILEGVNLAELSTIQS
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHH
RAKYALLLTQAKDKNYITHTDDSLIRVAVDYYDTSDDITLRAKAHYYLGRVCQDRGDIEG
HHHEEEEEEECCCCCCEEECCCCEEEEEEEEECCCCCEEEEEHHHHHHHHHHHCCCCCHH
TVREFLVAMPLAEKVDNYDLNILLKSNLGLLFWQHGLQEEADSLYRQTIELAETHHDSLR
HHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHH
LAVVLVSCADICMERGEEYYTDAEKYLKRALKLIKDTDKQHIKELVFSSLSYLLEYQGKS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
REAILFANKGMRLVLDSSERYGYYLVIGSAYLQLEQYDSASVYLNRGISSDNYYAKTNAY
CCEEEEECCCCEEEEECCCCCEEEEEEEHHHHHHHHCCCCHHEEECCCCCCCCEECCHHH
MKLSEMATKLGKKNEALEYETLYAIYKDSMKLVEQPVEVVSSLKDVLYHQSTERYESFLT
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QYRFCLLLLVLLFIITICFFLQRRRKRKEEMAQLVNKRQLLYKSIETIKKELEKKNIEIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EIQQHCEYLESDVNSKAQLDSCLNELLEQYHLMQEDLERRLVERDEEVKQLRNLNLKFIL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEE
MSSPVYQMLIELCEYNKLNPDGMKKITNDEWDILLHEIDMASLGFVERLSTKYEYLLEED
ECCCHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC
IRFCCLVRLDFKYADIASLWGCTSAAVYKRSWSVLEKMGLNKDKKIKLVDILRKI
CCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MNVNYVYGIIFLFLTSCLSPTDRVIPSLLHADSLIEVGCADSALSILEGVNLAELSTIQS
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHH
RAKYALLLTQAKDKNYITHTDDSLIRVAVDYYDTSDDITLRAKAHYYLGRVCQDRGDIEG
HHHEEEEEEECCCCCCEEECCCCEEEEEEEEECCCCCEEEEEHHHHHHHHHHHCCCCCHH
TVREFLVAMPLAEKVDNYDLNILLKSNLGLLFWQHGLQEEADSLYRQTIELAETHHDSLR
HHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHH
LAVVLVSCADICMERGEEYYTDAEKYLKRALKLIKDTDKQHIKELVFSSLSYLLEYQGKS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
REAILFANKGMRLVLDSSERYGYYLVIGSAYLQLEQYDSASVYLNRGISSDNYYAKTNAY
CCEEEEECCCCEEEEECCCCCEEEEEEEHHHHHHHHCCCCHHEEECCCCCCCCEECCHHH
MKLSEMATKLGKKNEALEYETLYAIYKDSMKLVEQPVEVVSSLKDVLYHQSTERYESFLT
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QYRFCLLLLVLLFIITICFFLQRRRKRKEEMAQLVNKRQLLYKSIETIKKELEKKNIEIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EIQQHCEYLESDVNSKAQLDSCLNELLEQYHLMQEDLERRLVERDEEVKQLRNLNLKFIL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEE
MSSPVYQMLIELCEYNKLNPDGMKKITNDEWDILLHEIDMASLGFVERLSTKYEYLLEED
ECCCHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC
IRFCCLVRLDFKYADIASLWGCTSAAVYKRSWSVLEKMGLNKDKKIKLVDILRKI
CCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA