| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347624
Identifier: 29347624
GI number: 29347624
Start: 2782415
End: 2783029
Strand: Reverse
Name: 29347624
Synonym: BT_2214
Alternate gene names: NA
Gene position: 2783029-2782415 (Counterclockwise)
Preceding gene: 29347625
Following gene: 29347623
Centisome position: 44.45
GC content: 45.2
Gene sequence:
>615_bases ATGCTGACATCCCCGGCTGATACATTGGTTTGCGACACCGTGCAGATTGCCAAATGGCAATCCGAATCGGCGTATGACTA CAATCGTGAACTGATAACTCCTGAAATCAATATCTTTGAATGGTTTCGCAGGCAGTTTGGGGAATTGTTGCGGAAGATAT TCGGCAGCCGTTTTGCCGAAGAGTATTCTGAACTTATATTAATATGTCTGGCCATTATTATTCTGCTCCTGATTATATGG TTTGTTTATAAGAAGCGTCCGGAGTTATTCATGCGTTCGCCCAAGAATAAACTGCCTTATGAAGTGGGAGAAGATACGAT TTACGGTGTGGATTTTTCGGGAGGGATTGCCGATGCGCTTTCCCGTTCCGATTATCGGGAGGCGGTGCGTCTGCTTTATT TGCAGACATTGAAACGGCTTAGCGACGAGAAACGCATTGACTGGCAGCCTTATAAAACACCGACACAGTATATCAATGAA GTACGGATACCCGTTTTCCGTCAGTTGACCAATCATTTCCTGAGGGTTCGTTACGGTAACTTTGAGGCAACGGAAGAACT GTTCAATTCCATGAAATCCTTGCAGGAAGAAATAGGGAAAGGAGGGGGCTCATGA
Upstream 100 bases:
>100_bases CCTACCAGTACGGTCACGCTTCCGAAGTGGTAGATAGTGTAACTGTAGAGAGCGATATTGATAATTTCGATAAACTCTAA ACATATATAATTCAGAATAG
Downstream 100 bases:
>100_bases GGGGAAGCCGCTGGTTTATCTTCTTTGTCCTTGCTTTTCTGCTGCTGATGTTTGCTATAGAATATCATCTGCCGAAGAAA TTTGTATGGGTGCCTACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MLTSPADTLVCDTVQIAKWQSESAYDYNRELITPEINIFEWFRRQFGELLRKIFGSRFAEEYSELILICLAIIILLLIIW FVYKKRPELFMRSPKNKLPYEVGEDTIYGVDFSGGIADALSRSDYREAVRLLYLQTLKRLSDEKRIDWQPYKTPTQYINE VRIPVFRQLTNHFLRVRYGNFEATEELFNSMKSLQEEIGKGGGS
Sequences:
>Translated_204_residues MLTSPADTLVCDTVQIAKWQSESAYDYNRELITPEINIFEWFRRQFGELLRKIFGSRFAEEYSELILICLAIIILLLIIW FVYKKRPELFMRSPKNKLPYEVGEDTIYGVDFSGGIADALSRSDYREAVRLLYLQTLKRLSDEKRIDWQPYKTPTQYINE VRIPVFRQLTNHFLRVRYGNFEATEELFNSMKSLQEEIGKGGGS >Mature_204_residues MLTSPADTLVCDTVQIAKWQSESAYDYNRELITPEINIFEWFRRQFGELLRKIFGSRFAEEYSELILICLAIIILLLIIW FVYKKRPELFMRSPKNKLPYEVGEDTIYGVDFSGGIADALSRSDYREAVRLLYLQTLKRLSDEKRIDWQPYKTPTQYINE VRIPVFRQLTNHFLRVRYGNFEATEELFNSMKSLQEEIGKGGGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24002; Mature: 24002
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSPADTLVCDTVQIAKWQSESAYDYNRELITPEINIFEWFRRQFGELLRKIFGSRFAE CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EYSELILICLAIIILLLIIWFVYKKRPELFMRSPKNKLPYEVGEDTIYGVDFSGGIADAL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHH SRSDYREAVRLLYLQTLKRLSDEKRIDWQPYKTPTQYINEVRIPVFRQLTNHFLRVRYGN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCC FEATEELFNSMKSLQEEIGKGGGS CHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLTSPADTLVCDTVQIAKWQSESAYDYNRELITPEINIFEWFRRQFGELLRKIFGSRFAE CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EYSELILICLAIIILLLIIWFVYKKRPELFMRSPKNKLPYEVGEDTIYGVDFSGGIADAL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHH SRSDYREAVRLLYLQTLKRLSDEKRIDWQPYKTPTQYINEVRIPVFRQLTNHFLRVRYGN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCC FEATEELFNSMKSLQEEIGKGGGS CHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA