| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347614
Identifier: 29347614
GI number: 29347614
Start: 2773161
End: 2775734
Strand: Reverse
Name: 29347614
Synonym: BT_2204
Alternate gene names: NA
Gene position: 2775734-2773161 (Counterclockwise)
Preceding gene: 29347621
Following gene: 29347613
Centisome position: 44.34
GC content: 42.66
Gene sequence:
>2574_bases ATGATACGACGTAGGCTTTGCCTCTTATTCCTACTGACTGGAATGACTCTGTTTGCTTATTCGCAAGGATTGTTGTTTCA GGCTAATGATAAAGAAATTAAAGAAAGGACTTCTCTTCAGATATTTCAGGAAGGGGAGATACCTTGTTTTACGAAAAACT TTCAGTTGAGCTTTGAACTTTCTATTCGCGATTTTGATACTTTTGGATATGTTTTTCTGCTGAAGGAAGATCAGGGGAAA ACTAAATATAGCTTTACGTATACTTATCTGGATGGTGAGAACAGTACATTCAAGTTTAATACCGACGGAAAAGAGAATCA TTATTCTTTAAATCTGCGCAATGATGCACTGGCTTATCAATGGATTCCTGTGTCTTTTGCATTCGATTTGCAACAGGACG TACTTACGATTCGTATCGGAGATAACGAAAAGAAGATTACTTCTTTAGGATTGAAAGATACTTTTTGTCCGCACCTCTTC TTCGGACGTTATGATTATATTTTGGATATGCCCACTTTTGCCATCCGCAATCTGAAGCTGGAAGGTGATAGAAGTCATTC ATATACTTTCCCTCTGAATGAAAATGAAGGGGAAGAAGTGCATACTTCTACAGGGAAGGTTTTGGGTACGGTTGTCAATC CGGTGTGGCTCATCAACGGTTCTTATCATTGGGAGAAACTTTTTGAGTATTCTTTTCAGACTCCTTCGGGAATCACTTTT GAGCCGGACAGTCAGCGACTGATTATTTTCAGCCAGGATTCACTTCTTACTTATAATCTGTTGAAACGTCAGCCACAAAA GTATTCTTATAGCAACAAACTACCCGTAAAATTGCAGTTGGCTACTCATTTCATGAATACAACGGATGGTAAACTTTATG TTTATGAATTGAATAACCTGCCGTTGGGGGATGCTACGGTAGCGGCGCTCGATCTGAATAATCAGGAGTGGAAACAGACC GGAGTAGCAGCCTTGCCGGTACAGTTGCACCATCATGACGGCTTTTGGGATGAAACAACCGGAAAGTATCTCGTTTTTGG CGGTTTTGGTAATAAGCGTTTTAACAATACATTCCTCGAATATGATATCGAGGCCGACCGTTGGGACACCCTCTCTTATT CCGGCGACCGGATTATCCCCCGTTATTTCTCGGGTATGGCAGTCAATAAGAACCGGGAGCATATCTATGTCTTTGGCGGG ATGGGAAACGAATCGGGTGAGCAGAGTGTAGGCCGAAATTATCTTCACGATCTTTATCTGCTTGACAGAAAGCAGCAGTC TGTGCGACGTTTGTGGCAGAACGCTTCGGATCATCGTTTGGTCGTCGCCCGTGATATGATACTGACACCTGATGAGAAGT ATATCTATGCCCTGTGTTATCCGGAATATCTTTCGGATACCTATCTGCAACTTTATCGCTTGACGGTTGATGATGGAACG ATGAAAGCTTTGGGAGATTCCATTCCGATGCGTTCGGAAGAGATTATGACGAATGCTAACCTTTACTATAATTCATTGAC GCATGAGTATTACTGTACGACCACAGAATTTGACAAGAAGGGGCATACGGTGATTCGGACTTATGTGTTGTCCGCCCCTC CGGTTTCTCTGGATGAAATCCGTTCTTACGGCTCCAGGTCTTCTCTGGAGATTCGTTGGTTATGGATAATGGCAGGAATA GGAGTATTATTGCTTGTCGGAGGTGTGCTGTTTGTCAGGAGAAAGAGGGGAAAACAAAGAAATGCGGTTCCGGAATCATC TTCTGTGCTCATGTCACCACCTGTCGGAAGAGAACCGGATAAAAGTGTACTGGGAAAAGAAATGCCTGCAAAAGAAGATT TTGAATCATCCATCGTTCGTCCGAATGCAGTTTATTTATTCGGTCCTTTTACGGTAATTGACCGGAATGGGCGGGATATT ACTCATTTGTTCAGTTCCCGTTTACGGCAGGTTTTCATCTATATCTTGCTTCATAGTACCCATAATGGAGTATTATCTGC CTCCTTGAATGAGGTTTTCTGGGCCGATAAACCCGACGACAAGGTGAAAAACCTGAAAGGGGTAACGATCAATCAGATTC GCAAAAATCTGGCTGAGCTGGATGGAGTGGAACTTGTACACGACAAGGGATATTTCAGACTGGTGTTTACTGACTGTTAT TGTGATTATTTCCGTTTCCGCACCTTGAAGAATGCTGAAGAGGTGGAGAATGAACTCGGCATTTTATTAATGCGTGGCAA ATTCCTTGATGGTATGGATGCGGGGATGATGGACCACTTCAAACAAAAAGTAGAAGAGTTCTTGTCTTCCTTTCTGCCAC TGGAAATCGAACGTCTGTATCAGCAGCATAAGTATGATGCCGTCATTCGTTTCTGTAATGTGCTTTTCCGGGTTGATCCG GTTAATGAGCTGGCACTGGCCTATGGTATGCATGCCCTTAACCATACAGGTTCGTCACAAGAAGCAATTCTGCAATATTC CCTGTTTGTGCGTGAGTACAAGCAAATGATGAATGAAGAATATTCTACTTCTTATGCAGAGCTGATGAGCAAAAATCCTC CTTTTCATCGATAA
Upstream 100 bases:
>100_bases AAACAGCCGGAACTGTAGGGTACCGACAAAGGTGATTTTCATCTGCTTAGGCGGTTATTTAAAATAATCCTGTATATTTG TGATAATAAATCGAAAGACT
Downstream 100 bases:
>100_bases AAACATATCGGTTAATGATATTTATTCGCTTATTAATCCGTTATTAACCCATCACTAATAAGTTGTTTAACCTTGCTACA TTATGTTTGCAGCGATGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 857; Mature: 857
Protein sequence:
>857_residues MIRRRLCLLFLLTGMTLFAYSQGLLFQANDKEIKERTSLQIFQEGEIPCFTKNFQLSFELSIRDFDTFGYVFLLKEDQGK TKYSFTYTYLDGENSTFKFNTDGKENHYSLNLRNDALAYQWIPVSFAFDLQQDVLTIRIGDNEKKITSLGLKDTFCPHLF FGRYDYILDMPTFAIRNLKLEGDRSHSYTFPLNENEGEEVHTSTGKVLGTVVNPVWLINGSYHWEKLFEYSFQTPSGITF EPDSQRLIIFSQDSLLTYNLLKRQPQKYSYSNKLPVKLQLATHFMNTTDGKLYVYELNNLPLGDATVAALDLNNQEWKQT GVAALPVQLHHHDGFWDETTGKYLVFGGFGNKRFNNTFLEYDIEADRWDTLSYSGDRIIPRYFSGMAVNKNREHIYVFGG MGNESGEQSVGRNYLHDLYLLDRKQQSVRRLWQNASDHRLVVARDMILTPDEKYIYALCYPEYLSDTYLQLYRLTVDDGT MKALGDSIPMRSEEIMTNANLYYNSLTHEYYCTTTEFDKKGHTVIRTYVLSAPPVSLDEIRSYGSRSSLEIRWLWIMAGI GVLLLVGGVLFVRRKRGKQRNAVPESSSVLMSPPVGREPDKSVLGKEMPAKEDFESSIVRPNAVYLFGPFTVIDRNGRDI THLFSSRLRQVFIYILLHSTHNGVLSASLNEVFWADKPDDKVKNLKGVTINQIRKNLAELDGVELVHDKGYFRLVFTDCY CDYFRFRTLKNAEEVENELGILLMRGKFLDGMDAGMMDHFKQKVEEFLSSFLPLEIERLYQQHKYDAVIRFCNVLFRVDP VNELALAYGMHALNHTGSSQEAILQYSLFVREYKQMMNEEYSTSYAELMSKNPPFHR
Sequences:
>Translated_857_residues MIRRRLCLLFLLTGMTLFAYSQGLLFQANDKEIKERTSLQIFQEGEIPCFTKNFQLSFELSIRDFDTFGYVFLLKEDQGK TKYSFTYTYLDGENSTFKFNTDGKENHYSLNLRNDALAYQWIPVSFAFDLQQDVLTIRIGDNEKKITSLGLKDTFCPHLF FGRYDYILDMPTFAIRNLKLEGDRSHSYTFPLNENEGEEVHTSTGKVLGTVVNPVWLINGSYHWEKLFEYSFQTPSGITF EPDSQRLIIFSQDSLLTYNLLKRQPQKYSYSNKLPVKLQLATHFMNTTDGKLYVYELNNLPLGDATVAALDLNNQEWKQT GVAALPVQLHHHDGFWDETTGKYLVFGGFGNKRFNNTFLEYDIEADRWDTLSYSGDRIIPRYFSGMAVNKNREHIYVFGG MGNESGEQSVGRNYLHDLYLLDRKQQSVRRLWQNASDHRLVVARDMILTPDEKYIYALCYPEYLSDTYLQLYRLTVDDGT MKALGDSIPMRSEEIMTNANLYYNSLTHEYYCTTTEFDKKGHTVIRTYVLSAPPVSLDEIRSYGSRSSLEIRWLWIMAGI GVLLLVGGVLFVRRKRGKQRNAVPESSSVLMSPPVGREPDKSVLGKEMPAKEDFESSIVRPNAVYLFGPFTVIDRNGRDI THLFSSRLRQVFIYILLHSTHNGVLSASLNEVFWADKPDDKVKNLKGVTINQIRKNLAELDGVELVHDKGYFRLVFTDCY CDYFRFRTLKNAEEVENELGILLMRGKFLDGMDAGMMDHFKQKVEEFLSSFLPLEIERLYQQHKYDAVIRFCNVLFRVDP VNELALAYGMHALNHTGSSQEAILQYSLFVREYKQMMNEEYSTSYAELMSKNPPFHR >Mature_857_residues MIRRRLCLLFLLTGMTLFAYSQGLLFQANDKEIKERTSLQIFQEGEIPCFTKNFQLSFELSIRDFDTFGYVFLLKEDQGK TKYSFTYTYLDGENSTFKFNTDGKENHYSLNLRNDALAYQWIPVSFAFDLQQDVLTIRIGDNEKKITSLGLKDTFCPHLF FGRYDYILDMPTFAIRNLKLEGDRSHSYTFPLNENEGEEVHTSTGKVLGTVVNPVWLINGSYHWEKLFEYSFQTPSGITF EPDSQRLIIFSQDSLLTYNLLKRQPQKYSYSNKLPVKLQLATHFMNTTDGKLYVYELNNLPLGDATVAALDLNNQEWKQT GVAALPVQLHHHDGFWDETTGKYLVFGGFGNKRFNNTFLEYDIEADRWDTLSYSGDRIIPRYFSGMAVNKNREHIYVFGG MGNESGEQSVGRNYLHDLYLLDRKQQSVRRLWQNASDHRLVVARDMILTPDEKYIYALCYPEYLSDTYLQLYRLTVDDGT MKALGDSIPMRSEEIMTNANLYYNSLTHEYYCTTTEFDKKGHTVIRTYVLSAPPVSLDEIRSYGSRSSLEIRWLWIMAGI GVLLLVGGVLFVRRKRGKQRNAVPESSSVLMSPPVGREPDKSVLGKEMPAKEDFESSIVRPNAVYLFGPFTVIDRNGRDI THLFSSRLRQVFIYILLHSTHNGVLSASLNEVFWADKPDDKVKNLKGVTINQIRKNLAELDGVELVHDKGYFRLVFTDCY CDYFRFRTLKNAEEVENELGILLMRGKFLDGMDAGMMDHFKQKVEEFLSSFLPLEIERLYQQHKYDAVIRFCNVLFRVDP VNELALAYGMHALNHTGSSQEAILQYSLFVREYKQMMNEEYSTSYAELMSKNPPFHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99284; Mature: 99284
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRRLCLLFLLTGMTLFAYSQGLLFQANDKEIKERTSLQIFQEGEIPCFTKNFQLSFEL CCHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCEEEEECCCCCEEEECEEEEEEE SIRDFDTFGYVFLLKEDQGKTKYSFTYTYLDGENSTFKFNTDGKENHYSLNLRNDALAYQ EEEEECCCEEEEEEEECCCCEEEEEEEEEECCCCCEEEECCCCCCCEEEEEECCCCEEEE WIPVSFAFDLQQDVLTIRIGDNEKKITSLGLKDTFCPHLFFGRYDYILDMPTFAIRNLKL EEEEEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCHHHHCCEEEEEECCCHHEEEEEE EGDRSHSYTFPLNENEGEEVHTSTGKVLGTVVNPVWLINGSYHWEKLFEYSFQTPSGITF ECCCCCCEEECCCCCCCCEEECCCCHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCCCEE EPDSQRLIIFSQDSLLTYNLLKRQPQKYSYSNKLPVKLQLATHFMNTTDGKLYVYELNNL CCCCCEEEEEECCCEEEHHHHHCCCCCCCCCCCCCEEEEEEEHHCCCCCCEEEEEECCCC PLGDATVAALDLNNQEWKQTGVAALPVQLHHHDGFWDETTGKYLVFGGFGNKRFNNTFLE CCCCCEEEEEECCCHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCEEE YDIEADRWDTLSYSGDRIIPRYFSGMAVNKNREHIYVFGGMGNESGEQSVGRNYLHDLYL EECCCCCCCEECCCCCEECHHHHCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH LDRKQQSVRRLWQNASDHRLVVARDMILTPDEKYIYALCYPEYLSDTYLQLYRLTVDDGT HHHHHHHHHHHHCCCCCCEEEEEECEEECCCCCEEEEEECHHHHCCCEEEEEEEEECCCH MKALGDSIPMRSEEIMTNANLYYNSLTHEYYCTTTEFDKKGHTVIRTYVLSAPPVSLDEI HHHHCCCCCCCCHHHHCCCCEEEECCCCEEEEECCCCCCCCCEEEEEEEECCCCCCHHHH RSYGSRSSLEIRWLWIMAGIGVLLLVGGVLFVRRKRGKQRNAVPESSSVLMSPPVGREPD HCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCC KSVLGKEMPAKEDFESSIVRPNAVYLFGPFTVIDRNGRDITHLFSSRLRQVFIYILLHST HHHHCCCCCCCCCHHHHCCCCCEEEEEECEEEEECCCCHHHHHHHHHHHHHEEEEEEECC HNGVLSASLNEVFWADKPDDKVKNLKGVTINQIRKNLAELDGVELVHDKGYFRLVFTDCY CCCEEEECHHHEECCCCCCHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEEEEHHH CDYFRFRTLKNAEEVENELGILLMRGKFLDGMDAGMMDHFKQKVEEFLSSFLPLEIERLY HHHHHHHHCCCHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH QQHKYDAVIRFCNVLFRVDPVNELALAYGMHALNHTGSSQEAILQYSLFVREYKQMMNEE HHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH YSTSYAELMSKNPPFHR HCHHHHHHHHCCCCCCC >Mature Secondary Structure MIRRRLCLLFLLTGMTLFAYSQGLLFQANDKEIKERTSLQIFQEGEIPCFTKNFQLSFEL CCHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCEEEEECCCCCEEEECEEEEEEE SIRDFDTFGYVFLLKEDQGKTKYSFTYTYLDGENSTFKFNTDGKENHYSLNLRNDALAYQ EEEEECCCEEEEEEEECCCCEEEEEEEEEECCCCCEEEECCCCCCCEEEEEECCCCEEEE WIPVSFAFDLQQDVLTIRIGDNEKKITSLGLKDTFCPHLFFGRYDYILDMPTFAIRNLKL EEEEEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCHHHHCCEEEEEECCCHHEEEEEE EGDRSHSYTFPLNENEGEEVHTSTGKVLGTVVNPVWLINGSYHWEKLFEYSFQTPSGITF ECCCCCCEEECCCCCCCCEEECCCCHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCCCEE EPDSQRLIIFSQDSLLTYNLLKRQPQKYSYSNKLPVKLQLATHFMNTTDGKLYVYELNNL CCCCCEEEEEECCCEEEHHHHHCCCCCCCCCCCCCEEEEEEEHHCCCCCCEEEEEECCCC PLGDATVAALDLNNQEWKQTGVAALPVQLHHHDGFWDETTGKYLVFGGFGNKRFNNTFLE CCCCCEEEEEECCCHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCEEE YDIEADRWDTLSYSGDRIIPRYFSGMAVNKNREHIYVFGGMGNESGEQSVGRNYLHDLYL EECCCCCCCEECCCCCEECHHHHCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH LDRKQQSVRRLWQNASDHRLVVARDMILTPDEKYIYALCYPEYLSDTYLQLYRLTVDDGT HHHHHHHHHHHHCCCCCCEEEEEECEEECCCCCEEEEEECHHHHCCCEEEEEEEEECCCH MKALGDSIPMRSEEIMTNANLYYNSLTHEYYCTTTEFDKKGHTVIRTYVLSAPPVSLDEI HHHHCCCCCCCCHHHHCCCCEEEECCCCEEEEECCCCCCCCCEEEEEEEECCCCCCHHHH RSYGSRSSLEIRWLWIMAGIGVLLLVGGVLFVRRKRGKQRNAVPESSSVLMSPPVGREPD HCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCC KSVLGKEMPAKEDFESSIVRPNAVYLFGPFTVIDRNGRDITHLFSSRLRQVFIYILLHST HHHHCCCCCCCCCHHHHCCCCCEEEEEECEEEEECCCCHHHHHHHHHHHHHEEEEEEECC HNGVLSASLNEVFWADKPDDKVKNLKGVTINQIRKNLAELDGVELVHDKGYFRLVFTDCY CCCEEEECHHHEECCCCCCHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEEEEHHH CDYFRFRTLKNAEEVENELGILLMRGKFLDGMDAGMMDHFKQKVEEFLSSFLPLEIERLY HHHHHHHHCCCHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH QQHKYDAVIRFCNVLFRVDPVNELALAYGMHALNHTGSSQEAILQYSLFVREYKQMMNEE HHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH YSTSYAELMSKNPPFHR HCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA