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The map label for this gene is rprY [H]

Identifier: 29347575

GI number: 29347575

Start: 2723104

End: 2723805

Strand: Reverse

Name: rprY [H]

Synonym: BT_2165

Alternate gene names: 29347575

Gene position: 2723805-2723104 (Counterclockwise)

Preceding gene: 29347576

Following gene: 29347573

Centisome position: 43.51

GC content: 39.74

Gene sequence:

>702_bases
ATGGACGAGAAACTGCGTATTTTATTATGCGAGGATGACGAAAATCTTGGCATGCTTTTAAGAGAATATTTACAGGCAAA
AGGTTATTCTGCTGAGTTATATCCTGATGGAGAAGCCGGTTATAAGGCTTTCTTGAAGAATAAATATGACTTGTGCGTGT
TTGACGTTATGATGCCTAAAAAGGATGGCTTTACGTTGGCACAGGATGTCCGTGCTGCGAATGCTGAGATACCTATCATC
TTCCTGACTGCAAAAACGCTGAAAGAAGATATCCTGGAAGGATTTAAGATTGGTGCAGATGATTATATCACGAAACCATT
CAGTATGGAAGAGTTGACTTTCAGAATTGAAGCTATCTTGAGACGTGTTCGTGGAAAGAAGAACAAAGAAAGCAATATCT
ACAAGATCGGTAAGTTTACTTTCGATACTCAGAAACAAATTCTGGCTACAGAAGGCAAGCAGACGAAGCTGACTACCAAA
GAATCTGAACTTCTCGGACTGCTTTGTGCGCACGCTAATGAAATTCTGCAACGTGACTTTGCTCTGAAGACTATCTGGAT
TGATGATAACTACTTCAATGCCCGTAGTATGGATGTGTATATTACGAAGTTGCGTAAGCACCTGAAAGAAGATGATTCTA
TCGAGATTATCAATATTCACGGAAAAGGCTATAAGCTGATCACACCGGAAGTTGAATCTTAA

Upstream 100 bases:

>100_bases
AAAATTATTACCGATCATAAGGGAACCATTAGAGCAGAAAGCGACCTGAACGTAGGAACTAAATTTATTATTGCATTACC
TTTATTAAAAAATAATTGAT

Downstream 100 bases:

>100_bases
TGAGCACTCCGATAACCACAAATAAAAAATCCCGGAAACATTCGTTCCCGGGATTTTTTATTGATTTCTAATAAATTAAT
CAGCGATCTTCTTATTAATG

Product: two-component system response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MDEKLRILLCEDDENLGMLLREYLQAKGYSAELYPDGEAGYKAFLKNKYDLCVFDVMMPKKDGFTLAQDVRAANAEIPII
FLTAKTLKEDILEGFKIGADDYITKPFSMEELTFRIEAILRRVRGKKNKESNIYKIGKFTFDTQKQILATEGKQTKLTTK
ESELLGLLCAHANEILQRDFALKTIWIDDNYFNARSMDVYITKLRKHLKEDDSIEIINIHGKGYKLITPEVES

Sequences:

>Translated_233_residues
MDEKLRILLCEDDENLGMLLREYLQAKGYSAELYPDGEAGYKAFLKNKYDLCVFDVMMPKKDGFTLAQDVRAANAEIPII
FLTAKTLKEDILEGFKIGADDYITKPFSMEELTFRIEAILRRVRGKKNKESNIYKIGKFTFDTQKQILATEGKQTKLTTK
ESELLGLLCAHANEILQRDFALKTIWIDDNYFNARSMDVYITKLRKHLKEDDSIEIINIHGKGYKLITPEVES
>Mature_233_residues
MDEKLRILLCEDDENLGMLLREYLQAKGYSAELYPDGEAGYKAFLKNKYDLCVFDVMMPKKDGFTLAQDVRAANAEIPII
FLTAKTLKEDILEGFKIGADDYITKPFSMEELTFRIEAILRRVRGKKNKESNIYKIGKFTFDTQKQILATEGKQTKLTTK
ESELLGLLCAHANEILQRDFALKTIWIDDNYFNARSMDVYITKLRKHLKEDDSIEIINIHGKGYKLITPEVES

Specific function: Member of the two-component regulatory system rprX/rprY [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=234, Percent_Identity=32.4786324786325, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1789402, Length=222, Percent_Identity=31.981981981982, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1786784, Length=228, Percent_Identity=30.2631578947368, Blast_Score=121, Evalue=3e-29,
Organism=Escherichia coli, GI1788394, Length=222, Percent_Identity=32.8828828828829, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI87082012, Length=226, Percent_Identity=32.3008849557522, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=31.0810810810811, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=28.3185840707965, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1790552, Length=228, Percent_Identity=29.8245614035088, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1786599, Length=227, Percent_Identity=28.6343612334802, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI2367329, Length=230, Percent_Identity=30, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=30.7017543859649, Blast_Score=103, Evalue=7e-24,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=27.1493212669683, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1786911, Length=228, Percent_Identity=27.6315789473684, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=29.8701298701299, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1788550, Length=116, Percent_Identity=27.5862068965517, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790437, Length=114, Percent_Identity=30.7017543859649, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI145693157, Length=127, Percent_Identity=27.5590551181102, Blast_Score=61, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=108, Percent_Identity=31.4814814814815, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26852; Mature: 26852

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKLRILLCEDDENLGMLLREYLQAKGYSAELYPDGEAGYKAFLKNKYDLCVFDVMMPK
CCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCCCEEEEEEECCC
KDGFTLAQDVRAANAEIPIIFLTAKTLKEDILEGFKIGADDYITKPFSMEELTFRIEAIL
CCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHH
RRVRGKKNKESNIYKIGKFTFDTQKQILATEGKQTKLTTKESELLGLLCAHANEILQRDF
HHHCCCCCCCCCEEEEEEEEECCCHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHCC
ALKTIWIDDNYFNARSMDVYITKLRKHLKEDDSIEIINIHGKGYKLITPEVES
EEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCC
>Mature Secondary Structure
MDEKLRILLCEDDENLGMLLREYLQAKGYSAELYPDGEAGYKAFLKNKYDLCVFDVMMPK
CCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCCCEEEEEEECCC
KDGFTLAQDVRAANAEIPIIFLTAKTLKEDILEGFKIGADDYITKPFSMEELTFRIEAIL
CCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHH
RRVRGKKNKESNIYKIGKFTFDTQKQILATEGKQTKLTTKESELLGLLCAHANEILQRDF
HHHCCCCCCCCCEEEEEEEEECCCHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHCC
ALKTIWIDDNYFNARSMDVYITKLRKHLKEDDSIEIINIHGKGYKLITPEVES
EEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8469117 [H]