| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347566
Identifier: 29347566
GI number: 29347566
Start: 2714468
End: 2715382
Strand: Reverse
Name: 29347566
Synonym: BT_2156
Alternate gene names: NA
Gene position: 2715382-2714468 (Counterclockwise)
Preceding gene: 29347567
Following gene: 29347563
Centisome position: 43.37
GC content: 40.11
Gene sequence:
>915_bases ATGAAACTCCAAATAAATCTATGTGCGCTGGCTCTTCTTTTAATGATTCCGTTTACGGCCATGGCACAGTCTAAAACAAA AGCGAAAGCTAAAAAAGAAGTAGCGATTCAACTCTATTCTGTCAGGGATATATTGAATAAGGTGGACAATAAGGACGGCA AATGTGACGCCGCTTATATTACTCTTCTGAAGAACTTGGCGAAAATGGGATATACCAGTGTGGAAGCCGCCAATTATAAT AATGGAAAGTTTTACGACAGAACTCCCGATCAATTTAAAAAAGATGTTGAATCTGCCGGGCTGAAGGTTTTATCCTCACA TTGCACAAGAGGATTGTCGAAAGAAGAATTAGCTTCCGGTGATTTTTCAAGTTCACTTCAATGGTGGGACCAGTGTATTG CTGATCATAAAGCTGCCGGTATGAGTTACATTGTAGCTCCTTGGATGGATGTGCCTAAAACACTTAAGGAGTTGGATACA TATTGTGCTTATTACAATGAAATAGGCAAACGTTGTAAACAGCAGGGGATGTCGTTCGGATACCATAATCATGCTCATGA ATTTCAGAAGGTAGAAGATAAAGTGATGTATGACTACATGATTGAGCATACCAATCCTGAATATGTTTTCTTCCAGATGG ATGTTTATTGGGTAGTTCGCGGGCAAAACAGTCCGGTAGATTATTTTAATAAATACCCCGGTCGTTTTAAAATGTTCCAT ATCAAGGATCACAGAGAAATCGGGCAGAGCGGAATGGTTGGTTTCGACGCTATTTTCAAGAATGCAAAGACGGCTGGTGT GAAGCATCTTGTTGCAGAGATAGAAAGCTACAGCATGCCCGTAGAGAAAAGTGTCGAGGTAAGTCTGGATTATTTGCTGG ATGCTCCTTTTGTTAAAAGCTCATACGCTAAATAA
Upstream 100 bases:
>100_bases CATCAACATGGCATTTAGTTCTGAATGACAGAATGATATGCCCGACGAACTTCTGACACAGCTTTTTTATTTTAATACAT GAACCCCTTTATCTACAAAC
Downstream 100 bases:
>100_bases GGCATAAAAAAAAGTCTGTGCATGCTTTTAGCATGTCAGACTTTCAATTCTCTCTAGGCTGTTCTGAATTATTCAGCTAC AGCTTCAGTTGCAGTGCTAT
Product: putative sugar phosphate isomerase/epimerase
Products: NA
Alternate protein names: Sugar Phosphate Isomerase/Epimerase; Xylose Isomerase Domain-Containing Protein; Xylose Isomerase DomaiN-Containing Protein Tim Barrel; Twin-Arginine Translocation Pathway Signal; Xylose Isomerase Domain-Containing Protein TIM Barrel; Sugar Phosphate Isomerase Epimerase; Sugar Phosphate Isomerase / Epimerase; Sugar Phosphate Isomerases/Epimerases; Xylose Isomerase-Like TIM Barrel; Xylose Isomerase Family Protein; Xlose Isomerase Domain-Containing Protein; Xylose Isomerase Domain-Containing Protein Tim Barrel
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MKLQINLCALALLLMIPFTAMAQSKTKAKAKKEVAIQLYSVRDILNKVDNKDGKCDAAYITLLKNLAKMGYTSVEAANYN NGKFYDRTPDQFKKDVESAGLKVLSSHCTRGLSKEELASGDFSSSLQWWDQCIADHKAAGMSYIVAPWMDVPKTLKELDT YCAYYNEIGKRCKQQGMSFGYHNHAHEFQKVEDKVMYDYMIEHTNPEYVFFQMDVYWVVRGQNSPVDYFNKYPGRFKMFH IKDHREIGQSGMVGFDAIFKNAKTAGVKHLVAEIESYSMPVEKSVEVSLDYLLDAPFVKSSYAK
Sequences:
>Translated_304_residues MKLQINLCALALLLMIPFTAMAQSKTKAKAKKEVAIQLYSVRDILNKVDNKDGKCDAAYITLLKNLAKMGYTSVEAANYN NGKFYDRTPDQFKKDVESAGLKVLSSHCTRGLSKEELASGDFSSSLQWWDQCIADHKAAGMSYIVAPWMDVPKTLKELDT YCAYYNEIGKRCKQQGMSFGYHNHAHEFQKVEDKVMYDYMIEHTNPEYVFFQMDVYWVVRGQNSPVDYFNKYPGRFKMFH IKDHREIGQSGMVGFDAIFKNAKTAGVKHLVAEIESYSMPVEKSVEVSLDYLLDAPFVKSSYAK >Mature_304_residues MKLQINLCALALLLMIPFTAMAQSKTKAKAKKEVAIQLYSVRDILNKVDNKDGKCDAAYITLLKNLAKMGYTSVEAANYN NGKFYDRTPDQFKKDVESAGLKVLSSHCTRGLSKEELASGDFSSSLQWWDQCIADHKAAGMSYIVAPWMDVPKTLKELDT YCAYYNEIGKRCKQQGMSFGYHNHAHEFQKVEDKVMYDYMIEHTNPEYVFFQMDVYWVVRGQNSPVDYFNKYPGRFKMFH IKDHREIGQSGMVGFDAIFKNAKTAGVKHLVAEIESYSMPVEKSVEVSLDYLLDAPFVKSSYAK
Specific function: Unknown
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34682; Mature: 34682
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLQINLCALALLLMIPFTAMAQSKTKAKAKKEVAIQLYSVRDILNKVDNKDGKCDAAYI CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH TLLKNLAKMGYTSVEAANYNNGKFYDRTPDQFKKDVESAGLKVLSSHCTRGLSKEELASG HHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC DFSSSLQWWDQCIADHKAAGMSYIVAPWMDVPKTLKELDTYCAYYNEIGKRCKQQGMSFG CCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YHNHAHEFQKVEDKVMYDYMIEHTNPEYVFFQMDVYWVVRGQNSPVDYFNKYPGRFKMFH CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCHHHHHCCCCCEEEEE IKDHREIGQSGMVGFDAIFKNAKTAGVKHLVAEIESYSMPVEKSVEVSLDYLLDAPFVKS ECCHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHC SYAK CCCC >Mature Secondary Structure MKLQINLCALALLLMIPFTAMAQSKTKAKAKKEVAIQLYSVRDILNKVDNKDGKCDAAYI CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH TLLKNLAKMGYTSVEAANYNNGKFYDRTPDQFKKDVESAGLKVLSSHCTRGLSKEELASG HHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC DFSSSLQWWDQCIADHKAAGMSYIVAPWMDVPKTLKELDTYCAYYNEIGKRCKQQGMSFG CCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YHNHAHEFQKVEDKVMYDYMIEHTNPEYVFFQMDVYWVVRGQNSPVDYFNKYPGRFKMFH CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCHHHHHCCCCCEEEEE IKDHREIGQSGMVGFDAIFKNAKTAGVKHLVAEIESYSMPVEKSVEVSLDYLLDAPFVKS ECCHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHC SYAK CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA