| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is htrB [C]
Identifier: 29347562
GI number: 29347562
Start: 2710021
End: 2710875
Strand: Reverse
Name: htrB [C]
Synonym: BT_2152
Alternate gene names: 29347562
Gene position: 2710875-2710021 (Counterclockwise)
Preceding gene: 29347563
Following gene: 29347561
Centisome position: 43.3
GC content: 44.33
Gene sequence:
>855_bases ATGTGGCTGTTTTCGGCGCTTCCCTTCCGGATATTGTACTTACTTTCGGATTTCAATTACCTGTTGATGTACCGTATAGG GAGGTATCGCCGGAAAGTAGTACGGGAGAATCTGAAGAAATCATTTCCCGAAAAAGACAAGAAAGAAAGGCTGCAGATCG AACGCCGTTTCTATCGTTACCTTTCCGACTATATGCTTGAAGACTTGAAAATGCTTCATATGTCACCCGAAGACCTTTAT AAGCGGATGACTTATAAGAATACGGAACAATATCTGGAACTGACCGAGAAATATGGCGGAATCATCGTAATGATTCCTCA TTATGCCAATTATGAATGGCTGATCGGGATGGGATCTATTATGAAACCGGGTGATGTACCGATGCAAGTCTATAAACCTC TGAAAGATAAATACTTGAACGAATTGTTCCAGCGCATCCGTTCCCGCTTCGGAGGATATAACGTTCCGAAACATTCTACG GCACGCGAAATTATCAAGTTGAAGCGTGAAGGCAAAAAGATGGTTGTCGGTCTGATTACTGACCAGTGGCCCAGCGGAAA CGAAAAATACTGGACTACTTTTTTGGGGCAGGAAACCGCCTTTCTGAATGGTGCGGAGCGCATTGCGAAAATGATGAACT TCCCTGTGTTCTATTGTGATCTGACAAAACCCGGCAGAGGGTATTGTGTAGCTGAGTTTAAGCTGATGACAGAGAAACCG AAGGAGACGGGTGAAGGAGAAATTACGGAAATGTTTGCTGATTATCTGGAACAGACGATTCGCAGGGAACCGGCTTATTG GCTGTGGTCTCATAAACGTTGGAAAGCTTCTAAGGCTGAATGTGAAAGGGGGTAA
Upstream 100 bases:
>100_bases GTCCGACTGGGAGAATTTAATGAAGACATGACAGCGCTTAAAGGCACAATTCTGATGAATTATGAAGTCTAGATTTATCT ATTGGCTGGTATATAGCGGG
Downstream 100 bases:
>100_bases GGATGAAAGTGTCAGTGGTTATTTTGAATTGGAACGGGTGCGATATGCTTCGTACTTTTCTTCCGTCCGTGATCCGCTAT TCGAAGAGCGAAGAAGTAGA
Product: putative acetyltransferase
Products: NA
Alternate protein names: Lipid A Biosynthesis Lauroyl Acyltransferase; Lauroyl/Myristoyl Acyltransferase; Acyltransferase HtrB/MsbB Family; Acyltransferase; Lipd A Biosynthesis Related Exported Protein; Lipid A Biosynthesis-Lipid IVA Acyltransferase; Lipid A Biosynthesis Lauroyl/Myristoyl Acyltransferase; Lipid A Acyl Transferase; Bacterial Lipid A Biosynthesis Acyltransferase
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MWLFSALPFRILYLLSDFNYLLMYRIGRYRRKVVRENLKKSFPEKDKKERLQIERRFYRYLSDYMLEDLKMLHMSPEDLY KRMTYKNTEQYLELTEKYGGIIVMIPHYANYEWLIGMGSIMKPGDVPMQVYKPLKDKYLNELFQRIRSRFGGYNVPKHST AREIIKLKREGKKMVVGLITDQWPSGNEKYWTTFLGQETAFLNGAERIAKMMNFPVFYCDLTKPGRGYCVAEFKLMTEKP KETGEGEITEMFADYLEQTIRREPAYWLWSHKRWKASKAECERG
Sequences:
>Translated_284_residues MWLFSALPFRILYLLSDFNYLLMYRIGRYRRKVVRENLKKSFPEKDKKERLQIERRFYRYLSDYMLEDLKMLHMSPEDLY KRMTYKNTEQYLELTEKYGGIIVMIPHYANYEWLIGMGSIMKPGDVPMQVYKPLKDKYLNELFQRIRSRFGGYNVPKHST AREIIKLKREGKKMVVGLITDQWPSGNEKYWTTFLGQETAFLNGAERIAKMMNFPVFYCDLTKPGRGYCVAEFKLMTEKP KETGEGEITEMFADYLEQTIRREPAYWLWSHKRWKASKAECERG >Mature_284_residues MWLFSALPFRILYLLSDFNYLLMYRIGRYRRKVVRENLKKSFPEKDKKERLQIERRFYRYLSDYMLEDLKMLHMSPEDLY KRMTYKNTEQYLELTEKYGGIIVMIPHYANYEWLIGMGSIMKPGDVPMQVYKPLKDKYLNELFQRIRSRFGGYNVPKHST AREIIKLKREGKKMVVGLITDQWPSGNEKYWTTFLGQETAFLNGAERIAKMMNFPVFYCDLTKPGRGYCVAEFKLMTEKP KETGEGEITEMFADYLEQTIRREPAYWLWSHKRWKASKAECERG
Specific function: Acylates The Intermediate (Kdo)2-Lipid IVa To Form (Kdo)2-(Lauroyl)-Lipid IVa. Has 10 Fold Selectivity For Lauroyl- Acp Over Myristoyl-Acp. [C]
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.-
Molecular weight: Translated: 34145; Mature: 34145
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLFSALPFRILYLLSDFNYLLMYRIGRYRRKVVRENLKKSFPEKDKKERLQIERRFYRY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LSDYMLEDLKMLHMSPEDLYKRMTYKNTEQYLELTEKYGGIIVMIPHYANYEWLIGMGSI HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCC MKPGDVPMQVYKPLKDKYLNELFQRIRSRFGGYNVPKHSTAREIIKLKREGKKMVVGLIT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEEEE DQWPSGNEKYWTTFLGQETAFLNGAERIAKMMNFPVFYCDLTKPGRGYCVAEFKLMTEKP CCCCCCCCCEEEHECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEEHHCCC KETGEGEITEMFADYLEQTIRREPAYWLWSHKRWKASKAECERG CCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHCCCCC >Mature Secondary Structure MWLFSALPFRILYLLSDFNYLLMYRIGRYRRKVVRENLKKSFPEKDKKERLQIERRFYRY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LSDYMLEDLKMLHMSPEDLYKRMTYKNTEQYLELTEKYGGIIVMIPHYANYEWLIGMGSI HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCC MKPGDVPMQVYKPLKDKYLNELFQRIRSRFGGYNVPKHSTAREIIKLKREGKKMVVGLIT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEEEE DQWPSGNEKYWTTFLGQETAFLNGAERIAKMMNFPVFYCDLTKPGRGYCVAEFKLMTEKP CCCCCCCCCEEEHECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEEHHCCC KETGEGEITEMFADYLEQTIRREPAYWLWSHKRWKASKAECERG CCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Acyltransferases [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA