Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347535

Identifier: 29347535

GI number: 29347535

Start: 2675474

End: 2676037

Strand: Reverse

Name: 29347535

Synonym: BT_2125

Alternate gene names: NA

Gene position: 2676037-2675474 (Counterclockwise)

Preceding gene: 29347543

Following gene: 29347531

Centisome position: 42.75

GC content: 41.13

Gene sequence:

>564_bases
ATGATAATTTGTCGTTTAGAAGATAATATGTATTTTTGTAGCATGATAAAACTAGTCAATAGCATGAAAAAGAAAGTATT
GTTTCTGCTGCCATTGTTTCTGGGTGCTTGTTCGGATAGCGGAGAAAGCCCTGTTATCACGATAGAAAAGCTATATGTGA
AAGTAGATCAAGGCGATGGAGAAACCATCCGCGAAGACTATGCAAACCGGATGAGTGAAATGCCTGCTTTGAAAGTGGGA
GATAAGGTGGATGCGTTTTTGATCTTGGACGGCAATGGAGCCGAACTGAAATCTTTCCAGCTTCAGAATGGGGAAGAGAT
GAAGACTGAGCTCCGTTATGAAAAGACAGAAGTCACTACCGAAGGAAATCTGACAGACGAAGAAAAAGGGCAGTTGCGCT
TCAAAGATGGCGTGACAAAGACTAAGGTGCTGGTTCATGCCACTATTGAGCATGTAGATAAAAATGGTGATGTACAATTA
TCTTTTTATCTCTCTTCAAAAGCGGAGTGTGAAGGAGCGCAGGAAGTGATTGACTTGAAAACAGAAGTCGTTGAGAATGA
ATGA

Upstream 100 bases:

>100_bases
GGATAAAAAGAGATATACGAAGCAAAGATAGTCATAAAAAATGAGAGATATAACAGAATGGAGGAGATAGTTGCTGGTTG
TGTTTTGGATGATAAATCGT

Downstream 100 bases:

>100_bases
ATCCTGAAAGGGAGTGAGTCACTTTAACGTAACGAAGGAAATATAATAAAAAGAAGCGGTCTCCGGAGAGGCCGCTTCTT
TTTATTGTCAGTTATTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MIICRLEDNMYFCSMIKLVNSMKKKVLFLLPLFLGACSDSGESPVITIEKLYVKVDQGDGETIREDYANRMSEMPALKVG
DKVDAFLILDGNGAELKSFQLQNGEEMKTELRYEKTEVTTEGNLTDEEKGQLRFKDGVTKTKVLVHATIEHVDKNGDVQL
SFYLSSKAECEGAQEVIDLKTEVVENE

Sequences:

>Translated_187_residues
MIICRLEDNMYFCSMIKLVNSMKKKVLFLLPLFLGACSDSGESPVITIEKLYVKVDQGDGETIREDYANRMSEMPALKVG
DKVDAFLILDGNGAELKSFQLQNGEEMKTELRYEKTEVTTEGNLTDEEKGQLRFKDGVTKTKVLVHATIEHVDKNGDVQL
SFYLSSKAECEGAQEVIDLKTEVVENE
>Mature_187_residues
MIICRLEDNMYFCSMIKLVNSMKKKVLFLLPLFLGACSDSGESPVITIEKLYVKVDQGDGETIREDYANRMSEMPALKVG
DKVDAFLILDGNGAELKSFQLQNGEEMKTELRYEKTEVTTEGNLTDEEKGQLRFKDGVTKTKVLVHATIEHVDKNGDVQL
SFYLSSKAECEGAQEVIDLKTEVVENE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21028; Mature: 21028

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIICRLEDNMYFCSMIKLVNSMKKKVLFLLPLFLGACSDSGESPVITIEKLYVKVDQGDG
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCC
ETIREDYANRMSEMPALKVGDKVDAFLILDGNGAELKSFQLQNGEEMKTELRYEKTEVTT
HHHHHHHHHHHHHCCCEECCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHEEEE
EGNLTDEEKGQLRFKDGVTKTKVLVHATIEHVDKNGDVQLSFYLSSKAECEGAQEVIDLK
CCCCCCCCCCCEEECCCCCCHHEEEEEEHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHH
TEVVENE
HHHHCCC
>Mature Secondary Structure
MIICRLEDNMYFCSMIKLVNSMKKKVLFLLPLFLGACSDSGESPVITIEKLYVKVDQGDG
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCC
ETIREDYANRMSEMPALKVGDKVDAFLILDGNGAELKSFQLQNGEEMKTELRYEKTEVTT
HHHHHHHHHHHHHCCCEECCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHEEEE
EGNLTDEEKGQLRFKDGVTKTKVLVHATIEHVDKNGDVQLSFYLSSKAECEGAQEVIDLK
CCCCCCCCCCCEEECCCCCCHHEEEEEEHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHH
TEVVENE
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA