| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is ttgG [H]
Identifier: 29347529
GI number: 29347529
Start: 2667526
End: 2668596
Strand: Reverse
Name: ttgG [H]
Synonym: BT_2119
Alternate gene names: 29347529
Gene position: 2668596-2667526 (Counterclockwise)
Preceding gene: 29347531
Following gene: 29347528
Centisome position: 42.63
GC content: 49.11
Gene sequence:
>1071_bases ATGAAACGATTCAACTTTTTATTAACAGGAATTTTAGTCGTTTTGTTGGCATCTTGCAGCCAACGTACACAGATTACAGA TAGCAAACCTACAGTGAAGATTGATACTGTACTTTCTGCCGGTGGACAGACGGCTTTGCAATTTCCCGGACGGGTGAAGG CGGCGCAGGATATAAGTTTATCATTCCGTGTAAGCGGAACTATATTGCGTATGTACGTCAACGACGGAACGTATGTGCGC AAAGGACAGCTGCTTGCCGAACTGGACCCTGCTGATTATCAGATTCAGCTGGATGCTGCGGAAGCGGAGTATCAAAGTGT GAAGGCGGAGGCGGAGCGTGTGATGGCACTTTATAAGGAGAATGTAACGACTCCCGACGCCAATGATAAAGCGATGTACG GGTTGAAACAGATAACCGCCAAGTACAATCATGCGAAAGATCAGCTGGAATATACCCGTTTGTATGCTCCTTTCAGCGGA TATGTACAGAAACGTCTTTTTGATTCCCATGAGACTATTGCGGCCGGTATGCCCGTTGTCTCCATTATCAGCGAGGGGAC ACCGGAGGTGGAAATTAATCTTCCGGCAGTAGAATATATCCGTCGCCAACAGTTCACCGGTTACACTTGTACGTTCGACA TTTATCCCGGTCAGGAGTATGCGCTCGATCTGATAAATGTCACCCCTAAAGCGAATGCCAATCAACTGTATACGATGCGT TTGCAGTTGAAGAAAGGTGAAGCGCAGGCGCTTCCTTCCCCCGGAATGAATACAATGGTCACTATAGAATGTACCGAAGG GGAAGTGCGTCATCTGTCCGTTCCTACGGGTGCGGTTCTTCGTGATAAGGGGATGGCGAGTGTTTTCCTTTATGATGCTT CCAGCCGGACCATCCGTCGTTGTGATGTGACAGTCACCCGTCTGCTGGGCAGCGGCAGGTGCCTGGTGACTGCGGAGGGC TTGAAGCCCGGTGACTTGATTGTTGCTTCGGGAGTACATCATGTGAAAGACGGGGAACAGGTAGAACCCCTTTTGCCTGC TTCTAAAACCAATGTGGGAGGATTGCTATGA
Upstream 100 bases:
>100_bases GTTGAAAAAACTGCAAATCGGACAATTTATAGCTTAAATCAACCTTTTTACTTTTATCTGCTTGGGATACTTTTGCATGA ACTAAATAACAAATGAAAAT
Downstream 100 bases:
>100_bases TCGATATAAGTAAATGGGCATTTGAAAATAAGAAGTTAATTTACTTCTTGATTGCGGTGCTGATAGTCGGAGGAGCTTAT TCCAGCTATGAAATGAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKRFNFLLTGILVVLLASCSQRTQITDSKPTVKIDTVLSAGGQTALQFPGRVKAAQDISLSFRVSGTILRMYVNDGTYVR KGQLLAELDPADYQIQLDAAEAEYQSVKAEAERVMALYKENVTTPDANDKAMYGLKQITAKYNHAKDQLEYTRLYAPFSG YVQKRLFDSHETIAAGMPVVSIISEGTPEVEINLPAVEYIRRQQFTGYTCTFDIYPGQEYALDLINVTPKANANQLYTMR LQLKKGEAQALPSPGMNTMVTIECTEGEVRHLSVPTGAVLRDKGMASVFLYDASSRTIRRCDVTVTRLLGSGRCLVTAEG LKPGDLIVASGVHHVKDGEQVEPLLPASKTNVGGLL
Sequences:
>Translated_356_residues MKRFNFLLTGILVVLLASCSQRTQITDSKPTVKIDTVLSAGGQTALQFPGRVKAAQDISLSFRVSGTILRMYVNDGTYVR KGQLLAELDPADYQIQLDAAEAEYQSVKAEAERVMALYKENVTTPDANDKAMYGLKQITAKYNHAKDQLEYTRLYAPFSG YVQKRLFDSHETIAAGMPVVSIISEGTPEVEINLPAVEYIRRQQFTGYTCTFDIYPGQEYALDLINVTPKANANQLYTMR LQLKKGEAQALPSPGMNTMVTIECTEGEVRHLSVPTGAVLRDKGMASVFLYDASSRTIRRCDVTVTRLLGSGRCLVTAEG LKPGDLIVASGVHHVKDGEQVEPLLPASKTNVGGLL >Mature_356_residues MKRFNFLLTGILVVLLASCSQRTQITDSKPTVKIDTVLSAGGQTALQFPGRVKAAQDISLSFRVSGTILRMYVNDGTYVR KGQLLAELDPADYQIQLDAAEAEYQSVKAEAERVMALYKENVTTPDANDKAMYGLKQITAKYNHAKDQLEYTRLYAPFSG YVQKRLFDSHETIAAGMPVVSIISEGTPEVEINLPAVEYIRRQQFTGYTCTFDIYPGQEYALDLINVTPKANANQLYTMR LQLKKGEAQALPSPGMNTMVTIECTEGEVRHLSVPTGAVLRDKGMASVFLYDASSRTIRRCDVTVTRLLGSGRCLVTAEG LKPGDLIVASGVHHVKDGEQVEPLLPASKTNVGGLL
Specific function: The periplasmic linker component of an organic solvent efflux pump. Involved in export of a number of organic solvents, including toluene and styrene. This is the most important solvent efflux pump in this strain, although it can export AMP and some antib
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1789665, Length=378, Percent_Identity=24.8677248677249, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 39051; Mature: 39051
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFNFLLTGILVVLLASCSQRTQITDSKPTVKIDTVLSAGGQTALQFPGRVKAAQDISL CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCEE SFRVSGTILRMYVNDGTYVRKGQLLAELDPADYQIQLDAAEAEYQSVKAEAERVMALYKE EEEECCEEEEEEECCCCEEECCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH NVTTPDANDKAMYGLKQITAKYNHAKDQLEYTRLYAPFSGYVQKRLFDSHETIAAGMPVV CCCCCCCCCHHHHHHHHHHHHHCCHHHHHEEEEEECCHHHHHHHHHHCCCCHHHCCCCHH SIISEGTPEVEINLPAVEYIRRQQFTGYTCTFDIYPGQEYALDLINVTPKANANQLYTMR HHHCCCCCEEEEECCHHHHHHHHCCCCEEEEEEECCCHHHEEEEEECCCCCCCCEEEEEE LQLKKGEAQALPSPGMNTMVTIECTEGEVRHLSVPTGAVLRDKGMASVFLYDASSRTIRR EEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCEEECCCCEEEEEEECCCCEEEE CDVTVTRLLGSGRCLVTAEGLKPGDLIVASGVHHVKDGEQVEPLLPASKTNVGGLL HHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRFNFLLTGILVVLLASCSQRTQITDSKPTVKIDTVLSAGGQTALQFPGRVKAAQDISL CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCEE SFRVSGTILRMYVNDGTYVRKGQLLAELDPADYQIQLDAAEAEYQSVKAEAERVMALYKE EEEECCEEEEEEECCCCEEECCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH NVTTPDANDKAMYGLKQITAKYNHAKDQLEYTRLYAPFSGYVQKRLFDSHETIAAGMPVV CCCCCCCCCHHHHHHHHHHHHHCCHHHHHEEEEEECCHHHHHHHHHHCCCCHHHCCCCHH SIISEGTPEVEINLPAVEYIRRQQFTGYTCTFDIYPGQEYALDLINVTPKANANQLYTMR HHHCCCCCEEEEECCHHHHHHHHCCCCEEEEEEECCCHHHEEEEEECCCCCCCCEEEEEE LQLKKGEAQALPSPGMNTMVTIECTEGEVRHLSVPTGAVLRDKGMASVFLYDASSRTIRR EEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCEEECCCCEEEEEEECCCCEEEE CDVTVTRLLGSGRCLVTAEGLKPGDLIVASGVHHVKDGEQVEPLLPASKTNVGGLL HHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11395460 [H]