| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347407
Identifier: 29347407
GI number: 29347407
Start: 2510942
End: 2511346
Strand: Reverse
Name: 29347407
Synonym: BT_1997
Alternate gene names: NA
Gene position: 2511346-2510942 (Counterclockwise)
Preceding gene: 29347411
Following gene: 29347398
Centisome position: 40.12
GC content: 41.98
Gene sequence:
>405_bases ATGAAGATTTTAAAAGATTTGCATACTGGTAGAAAGAAGTTTTCCAGAGTTGAGCGGATGCATTTTTTGCAAGAGCTGGA AGAAGAACTGAAAGTTTATTATCTCTCCTATACAGAGACAGTAGATAGGCCTTATTCCGAACAGGAACAAGAGATTATTG TCCGGATTATCAAGATGCTGATTCGTCAGCTTCGGGGTACATCCAAGTTTCAGTTGTTTAGCAGGAGAGGTACAAGACGT AAGTCCGAAGATCCGGATGATGTGGAAGAGCGGGAAGAGCGGCGAAAGGAACAGACAGACGAGATACGTTTGAAACATAC CAACCTTTACTCGTACAATCCTCTTTCCAAGAAGTATAAAGCGAGGAAAGAAGAACTGCTTCGGAACCTGAAAAGGGAGT TCTAA
Upstream 100 bases:
>100_bases ATATTGAAATAGTCGGACTCTCTTTTAAGTGTCCCATGCCCCATAAGTGTACTTATTAAAGGACTCACGCTTTTATCAGA CTTAAAAAAAGATAGACTAA
Downstream 100 bases:
>100_bases TCTTCCGGATGTTTCATTGAGAACGTCCGGGAAGTAACAAATAAGAGTAGACCGGCAAATGCGTATGTATTGTGAGTCCC TTGCGTTGGGAGTGTAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKILKDLHTGRKKFSRVERMHFLQELEEELKVYYLSYTETVDRPYSEQEQEIIVRIIKMLIRQLRGTSKFQLFSRRGTRR KSEDPDDVEEREERRKEQTDEIRLKHTNLYSYNPLSKKYKARKEELLRNLKREF
Sequences:
>Translated_134_residues MKILKDLHTGRKKFSRVERMHFLQELEEELKVYYLSYTETVDRPYSEQEQEIIVRIIKMLIRQLRGTSKFQLFSRRGTRR KSEDPDDVEEREERRKEQTDEIRLKHTNLYSYNPLSKKYKARKEELLRNLKREF >Mature_134_residues MKILKDLHTGRKKFSRVERMHFLQELEEELKVYYLSYTETVDRPYSEQEQEIIVRIIKMLIRQLRGTSKFQLFSRRGTRR KSEDPDDVEEREERRKEQTDEIRLKHTNLYSYNPLSKKYKARKEELLRNLKREF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16613; Mature: 16613
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILKDLHTGRKKFSRVERMHFLQELEEELKVYYLSYTETVDRPYSEQEQEIIVRIIKML CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH IRQLRGTSKFQLFSRRGTRRKSEDPDDVEEREERRKEQTDEIRLKHTNLYSYNPLSKKYK HHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH ARKEELLRNLKREF HHHHHHHHHHHHCC >Mature Secondary Structure MKILKDLHTGRKKFSRVERMHFLQELEEELKVYYLSYTETVDRPYSEQEQEIIVRIIKML CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH IRQLRGTSKFQLFSRRGTRRKSEDPDDVEEREERRKEQTDEIRLKHTNLYSYNPLSKKYK HHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH ARKEELLRNLKREF HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA