| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347369
Identifier: 29347369
GI number: 29347369
Start: 2460792
End: 2461121
Strand: Reverse
Name: 29347369
Synonym: BT_1959
Alternate gene names: NA
Gene position: 2461121-2460792 (Counterclockwise)
Preceding gene: 29347370
Following gene: 29347368
Centisome position: 39.31
GC content: 48.18
Gene sequence:
>330_bases ATGCAACTCCGGGGCGAGGTCACCCCGCACATCGGACGCCACGCATTTGCCGTTCTGGCCATACTCAAGGGGATGCTGCT GGAAACTCTTCAGAAAGTGTTTGGGCATAAGTCCATCACATACGTCCTGCGCATCCATTCACTTGTCCGGCGCAGGCGGA GCAATCTTTTTCTGGAAGTCGCCCATCTGTACGACCAGCGTGCTGACCAGCTTTCTCAACTCCTAATACGCGCTTGTTTC AATAATTGTCAGTTCCATACTAAAATTCTTTTTAAGATTCTGAATATGCGACAAAGTAACGCACATCCTATATCCTTTCC AAACAGATAA
Upstream 100 bases:
>100_bases AAATATAGGGGTACGGATGAAAAGAAAGACTCCCCGAATGTGTCTTTCCGGTAGGTGAATACAATGCCATGCGGCTCAGT CTTGGAATCATAGGCAGGAA
Downstream 100 bases:
>100_bases TATCAGAGTCTTCCGTTGGCGTGCATTGGCGTATCCAACGTTAAAAGAGAAGGTCCTTCACCTGCATCCATGCGGCAACG GAACTTCCATTCCCTTACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MQLRGEVTPHIGRHAFAVLAILKGMLLETLQKVFGHKSITYVLRIHSLVRRRRSNLFLEVAHLYDQRADQLSQLLIRACF NNCQFHTKILFKILNMRQSNAHPISFPNR
Sequences:
>Translated_109_residues MQLRGEVTPHIGRHAFAVLAILKGMLLETLQKVFGHKSITYVLRIHSLVRRRRSNLFLEVAHLYDQRADQLSQLLIRACF NNCQFHTKILFKILNMRQSNAHPISFPNR >Mature_109_residues MQLRGEVTPHIGRHAFAVLAILKGMLLETLQKVFGHKSITYVLRIHSLVRRRRSNLFLEVAHLYDQRADQLSQLLIRACF NNCQFHTKILFKILNMRQSNAHPISFPNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12747; Mature: 12747
Theoretical pI: Translated: 11.72; Mature: 11.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLRGEVTPHIGRHAFAVLAILKGMLLETLQKVFGHKSITYVLRIHSLVRRRRSNLFLEV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AHLYDQRADQLSQLLIRACFNNCQFHTKILFKILNMRQSNAHPISFPNR HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MQLRGEVTPHIGRHAFAVLAILKGMLLETLQKVFGHKSITYVLRIHSLVRRRRSNLFLEV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH AHLYDQRADQLSQLLIRACFNNCQFHTKILFKILNMRQSNAHPISFPNR HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA